#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
1_11                 -            210 AAA_22               PF13401.1    131   0.00023   12.5   0.2   1   1   9.1e-05    0.0027    9.1   0.2     7    80     4    88     2   100 0.64 # 4116 # 4745 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.325
1_11                 -            210 AAA_14               PF13173.1    128   2.4e-05   15.4   0.0   1   1   1.2e-06   3.4e-05   14.9   0.0     4    82     3    79     1   200 0.90 # 4116 # 4745 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.325
1_11                 -            210 AAA                  PF00004.24   132   1.9e-06   19.3   0.0   1   1   1.2e-07   3.5e-06   18.4   0.0     3    85     6    83     4   118 0.66 # 4116 # 4745 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.325
1_11                 -            210 Zot                  PF05707.7    193   8.5e-12   36.1   0.1   1   1   3.7e-11   1.1e-09   29.2   0.1     2   155     3   131     2   166 0.73 # 4116 # 4745 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.325
#
# Program:         hmmsearch
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SEARCH
# Query file:      /tmp/ef6232ee-9c31-4187-aaf8-ccbad233ce04
# Target file:     checkm_output/bins/pCP001178.1.assembled/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pCP001178.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/ef6232ee-9c31-4187-aaf8-ccbad233ce04 checkm_output/bins/pCP001178.1.assembled/genes.faa 
# Current dir:     /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2
# Date:            Tue Jul  7 16:36:45 2020
# [ok]