#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
1_40                 -            426 Terminase_6          PF03237.10   384   1.8e-18   58.8   1.7   1   1   5.5e-20     4e-18   57.7   1.7     2   306    31   333    30   410 0.77 # 34779 # 36056 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.352
1_8                  -            177 AAA_23               PF13476.1    202     0.002   10.9   3.9   1   1   2.7e-05     0.002   10.9   3.9    97   176    85   163     4   171 0.67 # 4511 # 5041 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.384
1_40                 -            426 Terminase_3          PF04466.8    387  1.7e-103  339.0   1.6   1   1  2.9e-105  2.2e-103  338.7   1.6     4   387    28   409    26   409 0.97 # 34779 # 36056 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.352
1_63                 -            111 Smg4_UPF3            PF03467.10   176   2.1e-05   17.0   5.2   1   1   3.8e-07   2.8e-05   16.6   5.2   110   174    13    78     9    80 0.95 # 45911 # 46243 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.357
#
# Program:         hmmsearch
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SEARCH
# Query file:      /tmp/1863937a-6953-49cf-882f-14981394221d
# Target file:     checkm_output/bins/pCP000229.1.assembled/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pCP000229.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/1863937a-6953-49cf-882f-14981394221d checkm_output/bins/pCP000229.1.assembled/genes.faa 
# Current dir:     /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2
# Date:            Tue Jul  7 16:36:33 2020
# [ok]