# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_8 - 182 Rad17 PF03215.10 519 0.00012 12.1 0.1 1 2 9.5e-06 0.00031 10.7 0.0 45 70 4 29 1 39 0.88 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_8 - 182 Rad17 PF03215.10 519 0.00012 12.1 0.1 2 2 0.045 1.5 -1.4 0.1 358 396 127 168 105 173 0.60 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_16 - 253 IstB_IS21 PF01695.12 178 1.5e-67 217.8 2.0 1 2 0.009 0.15 2.8 0.3 80 126 4 50 2 56 0.87 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_16 - 253 IstB_IS21 PF01695.12 178 1.5e-67 217.8 2.0 2 2 6.4e-68 1.1e-66 215.0 0.1 4 178 57 231 54 231 0.98 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_19 - 182 IstB_IS21 PF01695.12 178 6.7e-05 13.7 0.0 1 1 7.9e-06 0.00013 12.7 0.0 45 70 2 27 1 48 0.84 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_5 - 640 AIG1 PF04548.11 212 7.9e-05 13.1 0.0 1 1 6.1e-06 0.0002 11.8 0.0 32 62 51 81 43 109 0.83 # 3250 # 5169 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.403 1_8 - 182 CoaE PF01121.15 180 0.00023 11.9 0.9 1 2 0.00053 0.017 5.8 0.1 2 22 6 26 5 32 0.87 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_8 - 182 CoaE PF01121.15 180 0.00023 11.9 0.9 2 2 0.001 0.034 4.9 0.0 126 150 108 132 97 165 0.86 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_19 - 182 NB-ARC PF00931.17 287 1.6e-05 15.2 0.0 1 1 1.8e-06 2.9e-05 14.3 0.0 20 47 5 32 1 46 0.86 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 NB-ARC PF00931.17 287 7.7e-05 12.9 0.1 1 1 7.4e-06 0.00012 12.3 0.1 20 46 5 31 1 47 0.83 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_5 - 640 Septin PF00735.13 281 9e-05 12.9 0.1 1 1 5e-06 0.00016 12.0 0.1 7 77 6 82 3 90 0.68 # 3250 # 5169 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.403 1_16 - 253 AAA_22 PF13401.1 131 5.7e-08 24.3 0.6 1 1 1.6e-06 1.7e-05 16.3 0.6 5 101 101 176 97 204 0.64 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_19 - 182 AAA_22 PF13401.1 131 8.2e-08 23.8 0.2 1 1 2.8e-08 3.1e-07 22.0 0.1 3 33 3 33 1 85 0.83 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 AAA_22 PF13401.1 131 2.7e-07 22.2 0.3 1 2 1.9e-07 2e-06 19.3 0.1 3 28 3 28 1 84 0.86 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_8 - 182 AAA_22 PF13401.1 131 2.7e-07 22.2 0.3 2 2 0.077 0.84 1.1 0.0 60 97 121 159 92 174 0.76 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_8 - 182 SRP54 PF00448.17 196 2.4e-05 15.2 0.2 1 1 3.1e-06 5.2e-05 14.1 0.1 3 40 6 42 4 50 0.84 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_19 - 182 SRP54 PF00448.17 196 3.3e-05 14.7 0.0 1 1 3.8e-06 6.3e-05 13.8 0.0 3 40 6 42 4 50 0.82 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_19 - 182 AAA_3 PF07726.6 131 0.00015 12.7 0.1 1 1 1.5e-05 0.00049 11.1 0.0 2 29 7 34 6 43 0.82 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_19 - 182 AAA_17 PF13207.1 121 4.4e-15 47.9 0.0 1 1 4.7e-16 5.2e-15 47.7 0.0 1 115 6 129 6 163 0.71 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 AAA_17 PF13207.1 121 1.7e-13 42.8 0.0 1 1 1.9e-14 2e-13 42.6 0.0 1 115 6 129 6 161 0.71 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_16 - 253 AAA_17 PF13207.1 121 4.1e-05 15.8 2.7 1 1 7.4e-06 8.1e-05 14.8 0.9 2 59 103 168 102 234 0.64 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_5 - 640 Miro PF08477.8 119 1.7e-06 19.9 0.0 1 1 3.9e-07 4.3e-06 18.6 0.0 9 119 13 131 5 131 0.75 # 3250 # 5169 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.403 1_19 - 182 Miro PF08477.8 119 5.7e-05 15.0 0.2 1 1 2.9e-05 0.00032 12.6 0.0 2 33 7 38 6 63 0.84 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 Miro PF08477.8 119 8.8e-05 14.4 0.4 1 1 2.6e-05 0.00029 12.7 0.1 2 33 7 38 6 48 0.88 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_8 - 182 MobB PF03205.9 140 0.00016 12.7 0.1 1 1 2.1e-05 0.00035 11.7 0.1 2 24 6 28 5 41 0.78 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_19 - 182 MobB PF03205.9 140 0.00019 12.5 0.1 1 1 2.5e-05 0.00042 11.4 0.1 2 29 6 30 5 41 0.76 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_19 - 182 ArsA_ATPase PF02374.10 305 0.00024 11.5 0.6 1 2 1.7e-05 0.00056 10.3 0.1 2 32 5 34 4 48 0.79 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_19 - 182 ArsA_ATPase PF02374.10 305 0.00024 11.5 0.6 2 2 0.068 2.2 -1.5 0.1 163 174 136 147 99 175 0.52 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_16 - 253 PhoH PF02562.11 205 1.7e-08 25.2 0.1 1 1 3.8e-09 4.2e-08 24.0 0.0 12 78 93 158 79 187 0.76 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_8 - 182 PhoH PF02562.11 205 0.00013 12.5 0.4 1 1 2.3e-05 0.00025 11.6 0.1 18 49 3 34 1 36 0.84 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_19 - 182 PhoH PF02562.11 205 0.00013 12.5 0.1 1 1 2.3e-05 0.00025 11.6 0.1 18 46 3 31 1 36 0.81 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_16 - 253 AFG1_ATPase PF03969.11 362 1.5e-07 21.8 0.1 1 1 7.3e-09 2.4e-07 21.1 0.1 25 208 65 242 43 248 0.73 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_19 - 182 T2SE PF00437.15 272 1.7e-05 15.1 0.1 1 1 1.8e-06 3e-05 14.3 0.1 129 152 5 28 1 42 0.84 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 T2SE PF00437.15 272 2e-05 14.9 0.0 1 1 2e-06 3.3e-05 14.2 0.0 129 156 5 32 1 74 0.86 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_8 - 182 SKI PF01202.17 158 0.00021 12.6 2.3 1 1 6.6e-05 0.0022 9.2 2.3 1 141 13 157 13 174 0.54 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_19 - 182 Cytidylate_kin2 PF13189.1 179 6.8e-06 17.4 1.2 1 2 0.00022 0.0037 8.5 0.2 1 24 6 29 6 33 0.92 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_19 - 182 Cytidylate_kin2 PF13189.1 179 6.8e-06 17.4 1.2 2 2 0.00034 0.0055 7.9 0.1 87 147 70 138 30 146 0.70 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 Cytidylate_kin2 PF13189.1 179 7.9e-06 17.2 0.9 1 2 0.00097 0.016 6.4 0.2 1 24 6 29 6 38 0.93 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_8 - 182 Cytidylate_kin2 PF13189.1 179 7.9e-06 17.2 0.9 2 2 9e-05 0.0015 9.8 0.0 87 147 70 138 28 143 0.67 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_19 - 182 Zeta_toxin PF06414.7 201 5.7e-12 36.4 0.2 1 1 6.9e-13 1.1e-11 35.5 0.2 17 148 5 131 2 177 0.78 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 Zeta_toxin PF06414.7 201 5.1e-11 33.3 0.1 1 1 5.4e-12 8.9e-11 32.5 0.1 17 146 5 129 2 172 0.83 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_8 - 182 Arch_ATPase PF01637.13 234 7.5e-06 17.1 0.1 1 2 0.00046 0.015 6.3 0.0 20 46 4 30 1 74 0.82 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_8 - 182 Arch_ATPase PF01637.13 234 7.5e-06 17.1 0.1 2 2 5.6e-05 0.0019 9.2 0.2 48 117 102 173 92 181 0.71 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_19 - 182 AAA_16 PF13191.1 185 1.4e-06 19.8 0.0 1 1 2e-07 2.2e-06 19.1 0.0 23 63 3 44 2 90 0.80 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_16 - 253 AAA_16 PF13191.1 185 2.8e-06 18.8 0.0 1 1 4.4e-07 4.9e-06 18.0 0.0 25 63 101 139 86 183 0.87 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_8 - 182 AAA_16 PF13191.1 185 7.2e-05 14.2 0.0 1 1 1.1e-05 0.00012 13.4 0.0 23 47 3 27 2 78 0.83 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_19 - 182 AAA_23 PF13476.1 202 0.00077 11.1 1.6 1 2 5.1e-05 0.0017 10.0 1.0 21 38 6 23 2 25 0.88 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_19 - 182 AAA_23 PF13476.1 202 0.00077 11.1 1.6 2 2 0.082 2.7 -0.4 0.0 94 94 126 126 37 175 0.59 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_19 - 182 AAA_18 PF13238.1 129 1.8e-16 52.0 0.0 1 1 2.2e-17 2.5e-16 51.6 0.0 1 120 7 133 7 145 0.73 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 AAA_18 PF13238.1 129 2.3e-15 48.4 0.0 1 1 2.9e-16 3.1e-15 48.0 0.0 1 119 7 132 7 142 0.75 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_16 - 253 AAA_18 PF13238.1 129 0.00025 12.7 3.0 1 2 0.061 0.68 1.6 0.1 55 85 15 45 1 85 0.73 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_16 - 253 AAA_18 PF13238.1 129 0.00025 12.7 3.0 2 2 6.3e-05 0.00069 11.3 0.6 1 42 103 145 103 213 0.66 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_29 - 32 CbiA PF01656.18 195 3.8e-06 17.7 0.0 1 1 4.8e-07 4e-06 17.7 0.0 1 21 3 23 3 27 0.92 # 21659 # 21754 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.281 1_16 - 253 CbiA PF01656.18 195 4.9e-06 17.4 0.7 1 1 1.1e-06 8.9e-06 16.5 0.7 3 36 104 137 103 227 0.87 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_19 - 182 CbiA PF01656.18 195 0.00024 11.8 2.9 1 1 0.00025 0.0021 8.8 2.9 1 102 6 157 6 172 0.55 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 CbiA PF01656.18 195 0.00028 11.6 4.7 1 1 0.00081 0.0067 7.2 4.7 1 113 6 168 6 174 0.61 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_19 - 182 KaiC PF06745.8 227 1.3e-05 15.7 0.5 1 1 2e-06 3.2e-05 14.4 0.0 18 38 3 23 1 40 0.86 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 KaiC PF06745.8 227 1.7e-05 15.3 1.2 1 2 2e-06 3.3e-05 14.4 0.1 18 37 3 22 1 35 0.87 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_8 - 182 KaiC PF06745.8 227 1.7e-05 15.3 1.2 2 2 0.089 1.5 -0.8 0.1 101 103 134 136 99 177 0.47 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_16 - 253 AAA_14 PF13173.1 128 1.2e-07 23.0 0.4 1 1 1.1e-08 1.2e-07 23.0 0.4 2 95 100 199 99 228 0.68 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_19 - 182 AAA_14 PF13173.1 128 1.5e-07 22.7 0.0 1 1 1.9e-08 2.1e-07 22.2 0.0 2 118 4 135 3 145 0.64 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 AAA_14 PF13173.1 128 4.7e-07 21.1 0.0 1 1 7.1e-08 7.8e-07 20.4 0.0 2 119 4 136 3 145 0.67 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_8 - 182 GvpD PF07088.6 484 9.6e-05 12.1 0.7 1 2 4.6e-05 0.0015 8.1 0.1 9 25 3 19 1 35 0.87 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_8 - 182 GvpD PF07088.6 484 9.6e-05 12.1 0.7 2 2 0.0025 0.083 2.4 0.1 31 377 97 134 85 173 0.65 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_5 - 640 TIGR03594 TIGR03594 432 2.7e-09 27.4 0.3 1 3 0.031 1 -0.8 0.0 176 211 4 42 2 59 0.74 # 3250 # 5169 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.403 1_5 - 640 TIGR03594 TIGR03594 432 2.7e-09 27.4 0.3 2 3 9.8e-09 3.2e-07 20.6 0.1 31 123 51 135 48 155 0.86 # 3250 # 5169 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.403 1_5 - 640 TIGR03594 TIGR03594 432 2.7e-09 27.4 0.3 3 3 0.0017 0.056 3.3 0.0 304 348 196 240 186 266 0.82 # 3250 # 5169 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.403 1_16 - 253 AAA_29 PF13555.1 62 0.00012 12.9 0.1 1 1 1.8e-05 0.00061 10.7 0.0 11 38 87 115 82 123 0.78 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_19 - 182 AAA PF00004.24 132 2e-08 25.9 0.0 1 1 7.7e-09 8.4e-08 23.9 0.0 1 25 7 31 7 83 0.80 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 AAA PF00004.24 132 2.1e-08 25.8 0.1 1 1 1.4e-08 1.5e-07 23.0 0.0 2 34 8 41 7 85 0.78 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_16 - 253 AAA PF00004.24 132 1.1e-07 23.5 0.1 1 1 1.8e-08 2e-07 22.7 0.1 1 74 103 176 103 229 0.71 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_16 - 253 Bac_DnaA PF00308.13 219 6.7e-12 36.8 0.7 1 1 4.4e-13 1.5e-11 35.7 0.7 37 136 103 200 96 221 0.90 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_16 - 253 Sigma54_activat PF00158.21 168 2.3e-07 21.8 0.1 1 2 1.2e-06 1.4e-05 16.0 0.0 18 66 96 144 84 152 0.84 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_16 - 253 Sigma54_activat PF00158.21 168 2.3e-07 21.8 0.1 2 2 0.0084 0.092 3.5 0.0 96 122 164 191 155 204 0.76 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_8 - 182 Sigma54_activat PF00158.21 168 8.4e-05 13.4 0.0 1 1 1.3e-05 0.00015 12.6 0.0 25 68 7 57 1 88 0.75 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_19 - 182 Sigma54_activat PF00158.21 168 9.6e-05 13.2 0.0 1 1 1.7e-05 0.00018 12.3 0.0 25 51 7 33 1 90 0.74 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_5 - 640 MMR_HSR1 PF01926.18 116 7.2e-09 27.0 0.1 1 1 4.4e-10 1.4e-08 26.0 0.1 4 116 8 129 5 129 0.68 # 3250 # 5169 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.403 1_16 - 253 DUF258 PF03193.11 161 1.1e-05 16.0 0.1 1 2 1.1e-06 3.6e-05 14.3 0.0 18 55 83 120 67 154 0.79 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_16 - 253 DUF258 PF03193.11 161 1.1e-05 16.0 0.1 2 2 0.096 3.2 -1.7 0.1 48 68 227 249 225 252 0.67 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_16 - 253 NTPase_1 PF03266.10 168 1.6e-06 19.2 1.1 1 2 0.0026 0.029 5.4 0.3 1 28 102 129 102 141 0.80 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_16 - 253 NTPase_1 PF03266.10 168 1.6e-06 19.2 1.1 2 2 8.8e-06 9.7e-05 13.5 0.0 68 129 126 198 122 217 0.79 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_19 - 182 NTPase_1 PF03266.10 168 1.3e-05 16.3 0.2 1 1 2.7e-06 3e-05 15.1 0.2 2 22 7 27 6 37 0.87 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 NTPase_1 PF03266.10 168 6.5e-05 14.0 1.0 1 1 9.6e-06 0.00011 13.3 0.4 2 22 7 27 6 35 0.85 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_19 - 182 AAA_33 PF13671.1 143 2e-15 48.3 0.0 1 1 2.4e-16 2.6e-15 47.9 0.0 2 127 7 135 6 146 0.84 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 AAA_33 PF13671.1 143 5.9e-15 46.7 0.0 1 1 6.5e-16 7.1e-15 46.5 0.0 2 135 7 143 6 147 0.84 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_16 - 253 AAA_33 PF13671.1 143 5.2e-05 14.5 0.0 1 1 8.4e-06 9.2e-05 13.7 0.0 2 93 103 217 103 230 0.73 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_19 - 182 KTI12 PF08433.5 270 9.1e-07 19.6 0.1 1 1 1.7e-07 2.7e-06 18.0 0.0 3 43 6 45 5 87 0.74 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 KTI12 PF08433.5 270 2.8e-06 18.0 0.1 1 1 4.3e-07 7.1e-06 16.7 0.0 3 43 6 45 5 88 0.71 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_32 - 557 Methyltransf_26 PF13659.1 117 6.2e-14 43.4 0.0 1 1 3.1e-15 1e-13 42.7 0.0 3 116 312 422 310 423 0.84 # 22527 # 24197 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.310 1_19 - 182 AAA_30 PF13604.1 196 9.9e-06 16.6 0.6 1 1 9.4e-07 1.5e-05 15.9 0.1 17 40 3 26 1 37 0.87 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 AAA_30 PF13604.1 196 2.7e-05 15.1 0.1 1 1 2.9e-06 4.8e-05 14.3 0.1 17 40 3 26 1 38 0.83 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_32 - 557 MTS PF05175.9 170 3.9e-06 17.7 0.0 1 1 2.6e-07 8.5e-06 16.6 0.0 31 142 309 423 302 443 0.76 # 22527 # 24197 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.310 1_8 - 182 ABC_tran PF00005.22 137 5.3e-06 18.1 0.2 1 1 3.6e-07 6e-06 18.0 0.2 9 45 2 37 1 172 0.83 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_19 - 182 ABC_tran PF00005.22 137 8e-06 17.6 0.0 1 1 5.3e-07 8.7e-06 17.4 0.0 9 51 2 43 1 172 0.81 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 TIGR03263 TIGR03263 180 1.8e-05 15.5 0.4 1 2 1.5e-05 0.00025 11.7 0.0 1 36 4 38 4 75 0.87 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_8 - 182 TIGR03263 TIGR03263 180 1.8e-05 15.5 0.4 2 2 0.014 0.24 2.0 0.2 108 170 101 162 95 173 0.64 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_19 - 182 TIGR03263 TIGR03263 180 3.3e-05 14.6 0.1 1 1 4.7e-06 7.7e-05 13.4 0.0 1 36 4 38 4 77 0.84 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_16 - 253 ATP-synt_ab PF00006.20 215 5.2e-05 14.1 0.0 1 1 1.5e-05 0.00016 12.5 0.0 18 126 103 249 98 252 0.71 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_8 - 182 ATP-synt_ab PF00006.20 215 5.3e-05 14.1 0.0 1 1 5e-06 5.5e-05 14.1 0.0 14 71 3 121 1 179 0.75 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_19 - 182 ATP-synt_ab PF00006.20 215 6.1e-05 13.9 0.0 1 1 7.2e-06 7.9e-05 13.5 0.0 14 49 3 99 1 178 0.68 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_32 - 557 Eco57I PF07669.6 106 2.4e-09 28.9 0.3 1 1 2.3e-10 7.5e-09 27.3 0.3 3 104 372 473 369 475 0.83 # 22527 # 24197 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.310 1_8 - 182 RuvB_N PF05496.7 234 6.6e-06 16.6 0.0 1 1 8.2e-07 1.4e-05 15.6 0.0 53 76 7 30 3 41 0.85 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_19 - 182 RuvB_N PF05496.7 234 7.3e-05 13.2 0.1 1 1 9.7e-06 0.00016 12.1 0.0 53 76 7 30 3 40 0.85 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_19 - 182 AAA_19 PF13245.1 76 3.1e-08 24.7 0.1 1 1 4.5e-09 7.5e-08 23.5 0.1 10 31 4 25 1 32 0.85 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 AAA_19 PF13245.1 76 6.7e-08 23.6 0.1 1 1 9.6e-09 1.6e-07 22.4 0.1 10 32 4 25 1 34 0.84 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_16 - 253 ResIII PF04851.10 184 0.00012 13.3 4.7 1 2 0.045 1.5 -0.1 0.2 118 154 3 40 1 69 0.72 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_16 - 253 ResIII PF04851.10 184 0.00012 13.3 4.7 2 2 3.6e-06 0.00012 13.3 2.8 22 71 82 157 22 209 0.68 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_5 - 640 GTP_EFTU_D2 PF03144.20 74 9e-10 30.0 0.0 1 1 5.6e-11 1.9e-09 29.0 0.0 3 60 265 316 263 323 0.90 # 3250 # 5169 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.403 1_19 - 182 Viral_helicase1 PF01443.13 234 4.9e-05 14.2 0.0 1 1 2.5e-06 8.2e-05 13.5 0.0 1 60 7 75 7 88 0.65 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_19 - 182 DUF2075 PF09848.4 352 1.1e-06 19.1 0.2 1 1 1.3e-07 2.1e-06 18.2 0.1 2 26 5 31 4 48 0.79 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 DUF2075 PF09848.4 352 2.9e-06 17.7 0.1 1 1 3.2e-07 5.3e-06 16.9 0.0 2 29 5 32 4 85 0.83 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_19 - 182 TIP49 PF06068.8 398 8.5e-06 15.9 0.2 1 2 1.6e-06 2.7e-05 14.3 0.0 50 75 4 29 2 45 0.82 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_19 - 182 TIP49 PF06068.8 398 8.5e-06 15.9 0.2 2 2 0.074 1.2 -1.0 0.1 142 178 120 156 103 172 0.71 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 TIP49 PF06068.8 398 6.2e-05 13.1 0.2 1 2 1.2e-05 0.0002 11.4 0.0 50 77 4 31 2 45 0.84 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_8 - 182 TIP49 PF06068.8 398 6.2e-05 13.1 0.2 2 2 0.071 1.2 -1.0 0.2 143 181 121 159 101 172 0.70 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_19 - 182 AAA_11 PF13086.1 236 9.2e-06 16.7 0.6 1 1 1.2e-06 2e-05 15.5 0.6 17 42 4 34 1 178 0.65 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 AAA_11 PF13086.1 236 2.9e-05 15.0 0.3 1 1 2.8e-06 4.5e-05 14.4 0.3 17 43 4 30 1 175 0.71 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_8 - 182 CPT PF07931.7 174 1.4e-12 38.9 0.0 1 1 1.6e-13 2.7e-12 38.0 0.0 1 172 4 172 4 174 0.80 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_19 - 182 CPT PF07931.7 174 2.9e-12 37.9 0.0 1 1 3.5e-13 5.8e-12 36.9 0.0 1 172 4 172 4 174 0.81 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_19 - 182 Guanylate_kin PF00625.16 183 0.00022 12.1 1.1 1 2 6.8e-05 0.0022 8.7 0.1 1 27 3 29 3 87 0.75 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_19 - 182 Guanylate_kin PF00625.16 183 0.00022 12.1 1.1 2 2 0.0088 0.29 1.9 0.1 106 173 97 159 93 175 0.57 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_5 - 640 GTP_EFTU PF00009.22 188 3.8e-60 193.8 0.3 1 1 1.7e-61 5.7e-60 193.3 0.3 2 185 2 237 1 240 0.92 # 3250 # 5169 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.403 1_16 - 253 RNA_helicase PF00910.17 107 3.2e-08 25.1 0.4 1 2 0.03 0.33 2.5 0.1 41 97 24 80 4 83 0.71 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_16 - 253 RNA_helicase PF00910.17 107 3.2e-08 25.1 0.4 2 2 7.9e-08 8.7e-07 20.5 0.0 1 74 103 187 103 206 0.86 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_19 - 182 RNA_helicase PF00910.17 107 0.00012 13.6 0.0 1 1 2e-05 0.00022 12.8 0.0 1 35 7 42 7 77 0.71 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 RNA_helicase PF00910.17 107 0.00015 13.3 0.0 1 1 2.7e-05 0.00029 12.4 0.0 1 24 7 31 7 78 0.68 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_5 - 640 EFG_IV PF03764.13 120 3.1e-26 82.7 0.0 1 1 3.5e-27 1.2e-25 80.8 0.0 1 120 416 532 416 532 0.98 # 3250 # 5169 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.403 1_19 - 182 AAA_24 PF13479.1 213 8.9e-05 13.5 0.2 1 1 2.3e-05 0.00025 12.0 0.0 5 23 6 24 2 43 0.83 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_16 - 253 AAA_24 PF13479.1 213 0.00014 12.8 1.3 1 1 6.6e-05 0.00073 10.5 0.5 2 24 99 121 98 233 0.75 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_8 - 182 AAA_24 PF13479.1 213 0.00015 12.7 0.3 1 1 3.2e-05 0.00035 11.5 0.0 5 22 6 23 2 39 0.86 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_16 - 253 NACHT PF05729.7 166 1.3e-05 16.3 0.2 1 1 4e-06 4.4e-05 14.5 0.1 3 40 103 134 101 200 0.78 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_19 - 182 NACHT PF05729.7 166 8.9e-05 13.5 0.0 1 1 1.6e-05 0.00017 12.6 0.0 1 29 5 33 5 64 0.75 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 NACHT PF05729.7 166 0.00028 11.9 0.0 1 1 5e-05 0.00056 10.9 0.0 1 32 5 36 5 57 0.75 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_16 - 253 AAA_25 PF13481.1 194 3.5e-07 21.1 0.4 1 2 0.034 0.38 1.4 0.0 123 158 13 50 3 75 0.73 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_16 - 253 AAA_25 PF13481.1 194 3.5e-07 21.1 0.4 2 2 1.1e-06 1.2e-05 16.1 0.0 29 61 96 128 83 148 0.87 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_19 - 182 AAA_25 PF13481.1 194 8.2e-06 16.6 0.4 1 1 2.4e-06 2.6e-05 15.0 0.3 32 55 3 26 1 40 0.88 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 AAA_25 PF13481.1 194 4.8e-05 14.1 0.9 1 1 2.5e-05 0.00027 11.7 0.3 32 51 3 22 1 28 0.86 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_19 - 182 IPT PF01745.11 233 0.00014 12.3 0.2 1 2 1.4e-05 0.00046 10.7 0.1 3 25 6 28 4 41 0.90 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_19 - 182 IPT PF01745.11 233 0.00014 12.3 0.2 2 2 0.047 1.5 -0.8 0.0 193 214 126 147 83 164 0.72 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_19 - 182 AAA_28 PF13521.1 163 1.1e-08 26.5 0.2 1 2 3.9e-09 6.4e-08 24.1 0.0 2 65 7 74 6 87 0.69 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_19 - 182 AAA_28 PF13521.1 163 1.1e-08 26.5 0.2 2 2 0.072 1.2 0.4 0.2 18 88 98 160 90 179 0.48 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_8 - 182 AAA_28 PF13521.1 163 5e-07 21.2 0.0 1 1 5.8e-08 9.6e-07 20.2 0.0 2 37 7 47 6 86 0.63 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_16 - 253 AAA_5 PF07728.9 139 2.7e-05 15.2 0.2 1 1 2.6e-06 8.6e-05 13.6 0.1 1 30 102 132 102 193 0.77 # 12115 # 12873 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.302 1_8 - 182 APS_kinase PF01583.15 157 8.5e-06 16.8 0.0 1 2 1.9e-05 0.00032 11.7 0.0 1 47 3 47 3 94 0.61 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_8 - 182 APS_kinase PF01583.15 157 8.5e-06 16.8 0.0 2 2 0.0069 0.11 3.4 0.0 45 78 119 152 98 174 0.83 # 6873 # 7418 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377 1_19 - 182 APS_kinase PF01583.15 157 1.5e-05 16.0 0.1 1 2 6.8e-06 0.00011 13.2 0.0 1 75 3 80 3 121 0.67 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 1_19 - 182 APS_kinase PF01583.15 157 1.5e-05 16.0 0.1 2 2 0.034 0.56 1.2 0.0 44 74 118 148 97 158 0.75 # 14842 # 15387 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.396 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/4d690063-a30c-4ff7-9dbe-67cde2b647ee # Target file: checkm_output/bins/pAY701528.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pAY701528.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/4d690063-a30c-4ff7-9dbe-67cde2b647ee checkm_output/bins/pAY701528.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:36:15 2020 # [ok]