# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_4 - 502 Mg_chelatase PF01078.16 207 8.9e-06 14.9 0.1 1 2 7.5e-05 0.0009 8.3 0.1 27 49 33 55 29 61 0.89 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 Mg_chelatase PF01078.16 207 8.9e-06 14.9 0.1 2 2 0.0017 0.021 3.9 0.0 18 43 342 367 334 398 0.90 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 cobW PF02492.14 178 6.3e-06 15.6 0.9 1 2 0.0022 0.026 3.8 0.4 3 18 31 46 29 61 0.85 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 cobW PF02492.14 178 6.3e-06 15.6 0.9 2 2 4.2e-05 0.0005 9.4 0.0 4 21 350 367 348 375 0.83 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 Thymidylate_kin PF02223.12 186 3.5e-05 13.1 0.2 1 2 0.00037 0.0045 6.3 0.0 3 23 35 55 33 63 0.84 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 Thymidylate_kin PF02223.12 186 3.5e-05 13.1 0.2 2 2 0.002 0.024 3.9 0.0 3 17 353 367 351 369 0.88 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_6 - 198 DUF4430 PF14478.1 68 0.00071 9.6 3.5 1 2 0.0051 0.061 3.4 1.1 34 66 63 98 38 100 0.76 # 4945 # 5538 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 1_6 - 198 DUF4430 PF14478.1 68 0.00071 9.6 3.5 2 2 0.00056 0.0067 6.5 0.0 44 65 101 122 99 124 0.92 # 4945 # 5538 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 1_2 - 195 MipZ PF09140.6 261 8.8e-10 27.9 2.2 1 1 1.6e-08 1.9e-07 20.2 2.2 5 137 5 115 1 129 0.78 # 412 # 996 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.597 1_4 - 502 CoaE PF01121.15 180 8.9e-06 15.1 1.6 1 2 0.00052 0.0062 5.8 0.1 3 22 31 50 29 91 0.88 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 CoaE PF01121.15 180 8.9e-06 15.1 1.6 2 2 0.00016 0.0019 7.5 0.0 3 77 349 421 347 430 0.87 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 NB-ARC PF00931.17 287 6.9e-05 11.6 0.7 1 2 0.00023 0.0028 6.4 0.1 21 37 30 46 22 53 0.88 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 NB-ARC PF00931.17 287 6.9e-05 11.6 0.7 2 2 0.0021 0.026 3.2 0.0 22 40 349 367 339 372 0.86 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_22 PF13401.1 131 2.2e-11 33.9 0.1 1 2 1.1e-05 0.00013 12.1 0.3 4 125 28 193 24 199 0.61 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_22 PF13401.1 131 2.2e-11 33.9 0.1 2 2 2.2e-07 2.7e-06 17.5 0.0 9 112 351 473 347 488 0.81 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 ATP_bind_1 PF03029.12 238 8.5e-05 12.0 1.5 1 2 0.0014 0.017 4.5 0.3 2 21 34 53 33 60 0.84 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 ATP_bind_1 PF03029.12 238 8.5e-05 12.0 1.5 2 2 0.00045 0.0054 6.1 0.1 2 17 352 367 351 371 0.88 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 SRP54 PF00448.17 196 2.5e-06 17.0 0.5 1 2 0.00031 0.0037 6.6 0.3 6 28 33 55 29 61 0.84 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 SRP54 PF00448.17 196 2.5e-06 17.0 0.5 2 2 0.00014 0.0016 7.8 0.0 4 22 349 367 346 371 0.87 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_15 PF13175.1 415 0.00012 11.1 1.0 1 3 0.0006 0.0072 5.2 0.0 17 42 23 48 17 90 0.82 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_15 PF13175.1 415 0.00012 11.1 1.0 2 3 0.067 0.81 -1.6 0.0 262 296 88 121 66 128 0.74 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_15 PF13175.1 415 0.00012 11.1 1.0 3 3 0.0035 0.043 2.6 0.0 27 42 351 366 342 395 0.88 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_17 PF13207.1 121 6.3e-12 36.3 0.1 1 2 5.9e-08 7.1e-07 20.0 0.2 4 77 33 116 32 269 0.71 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_17 PF13207.1 121 6.3e-12 36.3 0.1 2 2 7e-06 8.4e-05 13.3 0.0 4 64 351 415 348 495 0.72 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_21 PF13304.1 303 1e-22 71.2 7.3 1 3 2.6e-13 3.1e-12 36.9 0.7 1 303 30 198 30 198 0.79 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_21 PF13304.1 303 1e-22 71.2 7.3 2 3 7.4e-05 0.00089 9.1 0.4 4 16 351 363 351 368 0.91 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_21 PF13304.1 303 1e-22 71.2 7.3 3 3 8.5e-09 1e-07 22.0 0.0 219 301 410 489 378 491 0.84 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 Miro PF08477.8 119 5.5e-08 23.3 0.0 1 2 0.00061 0.0073 6.8 0.0 4 28 33 56 31 126 0.73 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 Miro PF08477.8 119 5.5e-08 23.3 0.0 2 2 9.6e-06 0.00012 12.6 0.0 1 25 348 372 348 412 0.78 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 MobB PF03205.9 140 4.2e-06 16.4 0.3 1 2 0.00027 0.0033 7.1 0.2 5 21 33 49 30 60 0.88 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 MobB PF03205.9 140 4.2e-06 16.4 0.3 2 2 0.00034 0.0041 6.8 0.0 2 21 348 367 347 373 0.88 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_2 - 195 ArsA_ATPase PF02374.10 305 7.1e-08 21.6 0.0 1 1 7.4e-09 8.9e-08 21.3 0.0 1 44 1 44 1 80 0.89 # 412 # 996 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.597 1_4 - 502 G-alpha PF00503.15 389 9.3e-06 14.3 0.7 1 2 4.1e-05 0.00049 8.7 0.0 63 87 33 57 32 208 0.86 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 G-alpha PF00503.15 389 9.3e-06 14.3 0.7 2 2 0.0011 0.013 3.9 0.4 59 78 347 366 222 372 0.69 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 SMC_N PF02463.14 220 1.3e-16 50.4 2.8 1 4 4.8e-07 5.8e-06 15.5 0.2 19 41 23 45 19 51 0.87 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 SMC_N PF02463.14 220 1.3e-16 50.4 2.8 2 4 4.3e-09 5.2e-08 22.2 0.1 136 213 137 208 75 213 0.80 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 SMC_N PF02463.14 220 1.3e-16 50.4 2.8 3 4 0.00054 0.0065 5.6 0.0 28 44 350 366 340 370 0.84 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 SMC_N PF02463.14 220 1.3e-16 50.4 2.8 4 4 0.0017 0.02 4.0 0.0 136 202 428 490 388 499 0.81 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_2 - 195 VirC1 PF07015.6 231 1.3e-12 37.1 0.1 1 1 3.1e-13 3.8e-12 35.6 0.1 4 128 3 121 1 126 0.85 # 412 # 996 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.597 1_4 - 502 AAA_16 PF13191.1 185 8.7e-09 25.5 1.1 1 2 3.1e-07 3.7e-06 16.9 0.0 27 185 31 190 15 190 0.67 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_16 PF13191.1 185 8.7e-09 25.5 1.1 2 2 0.00076 0.0092 5.9 0.2 29 51 351 373 344 483 0.62 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_23 PF13476.1 202 1.1e-09 28.8 0.1 1 2 8.2e-07 9.8e-06 15.9 0.0 9 38 18 47 15 121 0.90 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_23 PF13476.1 202 1.1e-09 28.8 0.1 2 2 3.7e-05 0.00045 10.5 0.0 25 37 352 364 319 368 0.83 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_18 PF13238.1 129 1.7e-07 21.5 0.0 1 2 1.6e-05 0.0002 11.6 0.0 3 24 33 77 32 131 0.64 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_18 PF13238.1 129 1.7e-07 21.5 0.0 2 2 0.00045 0.0054 7.0 0.0 3 21 351 369 349 422 0.83 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_13 PF13166.1 712 2.9e-05 12.5 6.6 1 3 8.1e-06 9.7e-05 10.8 0.1 23 39 35 51 19 80 0.85 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_13 PF13166.1 712 2.9e-05 12.5 6.6 2 3 0.012 0.15 0.3 0.4 112 166 218 271 188 326 0.54 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_13 PF13166.1 712 2.9e-05 12.5 6.6 3 3 0.0015 0.018 3.3 0.1 23 36 353 366 352 374 0.83 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_2 - 195 CbiA PF01656.18 195 1.8e-19 59.8 0.0 1 1 4.5e-20 5.3e-19 58.2 0.0 2 190 4 164 3 169 0.76 # 412 # 996 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.597 1_4 - 502 AAA_14 PF13173.1 128 2.5e-06 17.3 0.0 1 3 0.00034 0.0041 7.0 0.0 6 39 32 71 28 146 0.64 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_14 PF13173.1 128 2.5e-06 17.3 0.0 2 3 0.047 0.57 0.0 0.0 58 110 152 204 114 222 0.59 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_14 PF13173.1 128 2.5e-06 17.3 0.0 3 3 0.00064 0.0077 6.1 0.0 7 25 351 369 346 414 0.86 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_29 PF13555.1 62 6.9e-10 28.4 0.8 1 2 7.3e-07 8.8e-06 15.2 0.2 24 39 29 44 18 56 0.79 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_29 PF13555.1 62 6.9e-10 28.4 0.8 2 2 1.4e-05 0.00016 11.1 0.0 26 41 349 364 342 368 0.84 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA PF00004.24 132 1.1e-05 15.5 0.0 1 2 0.00012 0.0014 8.8 0.0 3 31 33 61 31 97 0.77 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA PF00004.24 132 1.1e-05 15.5 0.0 2 2 0.003 0.037 4.2 0.0 3 20 351 368 349 416 0.85 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 MMR_HSR1 PF01926.18 116 2.5e-06 17.4 0.0 1 3 0.00039 0.0047 6.9 0.0 3 21 32 50 30 122 0.83 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 MMR_HSR1 PF01926.18 116 2.5e-06 17.4 0.0 2 3 0.041 0.5 0.3 0.0 81 104 174 200 150 228 0.77 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 MMR_HSR1 PF01926.18 116 2.5e-06 17.4 0.0 3 3 0.00075 0.009 5.9 0.0 2 21 349 368 348 403 0.85 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 DUF258 PF03193.11 161 2.1e-07 20.2 0.0 1 2 9.1e-06 0.00011 11.3 0.0 26 66 19 59 8 66 0.85 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 DUF258 PF03193.11 161 2.1e-07 20.2 0.0 2 2 0.00031 0.0038 6.3 0.0 36 58 347 369 328 395 0.87 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_2 - 195 AAA_31 PF13614.1 157 0.00014 11.8 0.0 1 2 0.00043 0.0051 6.7 0.0 8 40 8 40 2 48 0.80 # 412 # 996 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.597 1_2 - 195 AAA_31 PF13614.1 157 0.00014 11.8 0.0 2 2 0.0051 0.061 3.2 0.0 120 155 79 113 67 115 0.87 # 412 # 996 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.597 1_4 - 502 AAA_33 PF13671.1 143 4.9e-10 29.4 0.4 1 3 3.9e-06 4.7e-05 13.2 0.3 4 110 33 196 31 261 0.63 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_33 PF13671.1 143 4.9e-10 29.4 0.4 2 3 0.064 0.77 -0.5 0.0 35 66 241 261 174 294 0.63 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_33 PF13671.1 143 4.9e-10 29.4 0.4 3 3 1.3e-05 0.00016 11.5 0.0 4 37 351 384 349 449 0.73 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_30 PF13604.1 196 0.0055 6.2 9.8 1 2 0.00025 0.003 7.0 0.6 18 49 28 59 22 196 0.85 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_30 PF13604.1 196 0.0055 6.2 9.8 2 2 0.0014 0.017 4.6 0.1 19 39 348 367 340 369 0.78 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 FtsK_SpoIIIE PF01580.13 205 2.4e-06 17.0 0.4 1 2 0.0013 0.016 4.5 0.1 44 58 34 48 9 51 0.87 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 FtsK_SpoIIIE PF01580.13 205 2.4e-06 17.0 0.4 2 2 3.3e-05 0.00039 9.8 0.0 42 58 350 366 340 371 0.84 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 Dynamin_N PF00350.18 168 1.3e-05 15.0 0.3 1 2 0.00027 0.0032 7.2 0.1 3 31 33 60 32 192 0.76 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 Dynamin_N PF00350.18 168 1.3e-05 15.0 0.3 2 2 0.0014 0.016 4.9 0.0 4 22 352 370 349 380 0.85 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 ABC_tran PF00005.22 137 2.6e-40 127.8 0.8 1 2 8.6e-26 1e-24 77.3 0.0 12 137 29 166 19 166 0.84 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 ABC_tran PF00005.22 137 2.6e-40 127.8 0.8 2 2 9.5e-15 1.1e-13 41.5 0.0 11 137 346 459 340 459 0.81 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_19 PF13245.1 76 2.7e-06 17.1 1.5 1 2 0.00022 0.0027 7.5 0.1 10 36 28 53 22 70 0.81 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_19 PF13245.1 76 2.7e-06 17.1 1.5 2 2 0.00025 0.003 7.3 0.1 11 32 348 367 340 369 0.79 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_10 PF12846.2 304 4.2e-07 19.5 0.8 1 2 9.8e-05 0.0012 8.2 0.1 6 22 33 49 28 70 0.84 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_10 PF12846.2 304 4.2e-07 19.5 0.8 2 2 5.4e-05 0.00065 9.0 0.0 7 28 352 373 350 385 0.88 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 SbcCD_C PF13558.1 90 1.8e-12 37.0 0.1 1 2 3.6e-08 4.3e-07 19.8 0.1 25 89 130 181 112 182 0.83 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 SbcCD_C PF13558.1 90 1.8e-12 37.0 0.1 2 2 5.5e-06 6.6e-05 12.8 0.0 26 88 422 473 414 475 0.80 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 DUF3584 PF12128.3 1201 0.013 2.6 11.0 1 3 0.0036 0.044 0.8 0.2 20 36 31 47 29 52 0.87 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 DUF3584 PF12128.3 1201 0.013 2.6 11.0 2 3 0.0034 0.041 0.9 2.1 277 493 223 273 162 323 0.53 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 DUF3584 PF12128.3 1201 0.013 2.6 11.0 3 3 0.00016 0.0019 5.4 0.1 18 34 347 363 341 366 0.87 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 PduV-EutP PF10662.4 143 3.1e-05 13.4 0.0 1 2 0.0014 0.017 4.5 0.1 6 23 33 50 31 63 0.91 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 PduV-EutP PF10662.4 143 3.1e-05 13.4 0.0 2 2 0.00039 0.0047 6.3 0.0 3 28 348 373 346 377 0.89 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 RNA_helicase PF00910.17 107 6.9e-06 16.2 0.1 1 2 0.00028 0.0033 7.6 0.1 3 19 33 49 32 69 0.84 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 RNA_helicase PF00910.17 107 6.9e-06 16.2 0.1 2 2 0.0011 0.013 5.6 0.0 3 20 351 368 349 397 0.86 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 UPF0079 PF02367.12 123 1.3e-05 14.8 0.1 1 2 0.0012 0.015 4.9 0.0 19 49 32 63 23 135 0.81 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 UPF0079 PF02367.12 123 1.3e-05 14.8 0.1 2 2 0.00023 0.0027 7.3 0.1 18 38 349 369 335 373 0.88 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 NACHT PF05729.7 166 1.1e-08 24.8 0.0 1 2 0.00013 0.0015 8.1 0.1 5 21 33 49 30 54 0.90 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 NACHT PF05729.7 166 1.1e-08 24.8 0.0 2 2 2.4e-06 2.8e-05 13.7 0.0 3 22 349 368 347 424 0.91 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_25 PF13481.1 194 3.9e-06 16.3 4.3 1 2 2.4e-05 0.00029 10.1 0.9 34 55 29 50 4 190 0.89 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_25 PF13481.1 194 3.9e-06 16.3 4.3 2 2 0.00031 0.0037 6.6 0.1 34 54 347 367 316 483 0.81 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 ABC_tran_2 PF12848.2 85 0.0023 7.8 6.8 1 1 0.00053 0.0064 6.4 6.8 2 64 205 272 204 297 0.71 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_28 PF13521.1 163 3.5e-07 20.2 0.5 1 2 0.00011 0.0013 8.6 0.0 4 21 33 50 32 119 0.87 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_28 PF13521.1 163 3.5e-07 20.2 0.5 2 2 8.8e-05 0.0011 8.9 0.0 2 22 349 369 348 389 0.84 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_5 PF07728.9 139 1.6e-05 14.6 0.5 1 2 0.00011 0.0013 8.4 0.1 4 23 33 52 32 62 0.87 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 1_4 - 502 AAA_5 PF07728.9 139 1.6e-05 14.6 0.5 2 2 0.0034 0.041 3.5 0.0 4 20 351 367 348 369 0.88 # 2223 # 3728 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.577 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/510a715f-5cd1-46a9-a853-1c6ff0081dc7 # Target file: checkm_output/bins/pAY263990.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pAY263990.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/510a715f-5cd1-46a9-a853-1c6ff0081dc7 checkm_output/bins/pAY263990.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:36:13 2020 # [ok]