# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_47 - 320 Mg_chelatase PF01078.16 207 0.00074 11.8 0.1 1 2 3.1e-05 0.0037 9.5 0.0 23 43 12 33 9 47 0.83 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_47 - 320 Mg_chelatase PF01078.16 207 0.00074 11.8 0.1 2 2 0.041 4.8 -0.6 0.0 14 32 91 113 79 115 0.68 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_74 - 237 Thymidylate_kin PF02223.12 186 1.7e-05 17.4 0.0 1 2 0.00011 0.013 8.0 0.0 3 18 63 78 61 88 0.91 # 57594 # 58304 # 1 # ID=1_74;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.667 1_74 - 237 Thymidylate_kin PF02223.12 186 1.7e-05 17.4 0.0 2 2 0.00017 0.02 7.4 0.0 120 149 157 190 141 217 0.74 # 57594 # 58304 # 1 # ID=1_74;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.667 1_93 - 867 IstB_IS21 PF01695.12 178 3.1e-06 19.8 0.0 1 1 1.7e-07 9.7e-06 18.2 0.0 33 92 29 88 8 96 0.76 # 74516 # 77116 # -1 # ID=1_93;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.671 1_47 - 320 IstB_IS21 PF01695.12 178 0.0013 11.3 0.5 1 2 9.4e-05 0.0055 9.2 0.1 47 65 12 30 9 37 0.85 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_47 - 320 IstB_IS21 PF01695.12 178 0.0013 11.3 0.5 2 2 0.072 4.2 -0.2 0.0 108 145 42 79 32 90 0.77 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_36 - 386 MipZ PF09140.6 261 3.7e-12 38.9 0.0 1 2 1.2e-09 1.4e-07 24.0 0.0 2 40 117 155 116 164 0.91 # 33954 # 35111 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.624 1_36 - 386 MipZ PF09140.6 261 3.7e-12 38.9 0.0 2 2 3.1e-06 0.00036 12.8 0.0 81 110 225 254 204 267 0.77 # 33954 # 35111 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.624 1_36 - 386 YhjQ PF06564.7 244 3.2e-07 23.0 0.3 1 1 1.3e-08 1.5e-06 20.9 0.0 10 44 124 158 118 167 0.91 # 33954 # 35111 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.624 1_75 - 338 CoaE PF01121.15 180 0.00021 13.8 0.0 1 1 3.3e-06 0.00038 13.0 0.0 5 40 154 190 150 197 0.84 # 58510 # 59523 # 1 # ID=1_75;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.671 1_47 - 320 AAA_22 PF13401.1 131 8.8e-05 15.8 0.0 1 1 1.2e-06 0.00014 15.1 0.0 5 26 13 34 9 99 0.87 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_39 - 140 ATP_bind_2 PF03668.10 284 1.6e-10 33.6 0.0 1 1 4.8e-12 2.8e-10 32.8 0.0 175 280 23 121 3 125 0.86 # 36937 # 37356 # -1 # ID=1_39;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.736 1_74 - 237 ATP_bind_2 PF03668.10 284 0.0006 12.0 0.0 1 1 1.5e-05 0.0009 11.5 0.0 4 26 59 81 57 88 0.91 # 57594 # 58304 # 1 # ID=1_74;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.667 1_76 - 190 SRP54 PF00448.17 196 0.00039 13.0 0.3 1 1 1e-05 0.00061 12.4 0.1 4 65 7 72 4 93 0.79 # 59520 # 60089 # 1 # ID=1_76;partial=00;start_type=GTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.711 1_74 - 237 SRP54 PF00448.17 196 0.00059 12.4 0.0 1 1 1.5e-05 0.00086 11.9 0.0 2 19 57 74 56 83 0.84 # 57594 # 58304 # 1 # ID=1_74;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.667 1_74 - 237 AAA_17 PF13207.1 121 1e-11 38.8 0.0 1 1 6.3e-13 1.8e-11 38.0 0.0 2 115 59 188 58 226 0.72 # 57594 # 58304 # 1 # ID=1_74;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.667 1_75 - 338 AAA_17 PF13207.1 121 1.3e-06 22.4 0.0 1 1 5.9e-07 1.7e-05 18.8 0.0 1 41 151 189 151 233 0.77 # 58510 # 59523 # 1 # ID=1_75;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.671 1_76 - 190 AAA_17 PF13207.1 121 1.9e-05 18.7 0.1 1 1 1.6e-06 4.5e-05 17.4 0.1 2 23 7 58 7 183 0.60 # 59520 # 60089 # 1 # ID=1_76;partial=00;start_type=GTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.711 1_47 - 320 AAA_17 PF13207.1 121 3.2e-05 17.9 0.6 1 1 2.7e-06 8e-05 16.6 0.6 2 17 15 30 14 101 0.88 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_2 - 831 Helicase_C PF00271.26 78 4.5e-07 22.9 0.2 1 1 8e-09 9.4e-07 21.8 0.2 10 77 313 391 309 392 0.91 # 1335 # 3827 # 1 # ID=1_2;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.714 1_36 - 386 ArsA_ATPase PF02374.10 305 8.1e-12 37.8 0.5 1 1 5.1e-13 5.9e-11 35.0 0.5 2 45 117 160 116 257 0.93 # 33954 # 35111 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.624 1_74 - 237 T2SE PF00437.15 272 0.0013 10.8 0.0 1 1 1.9e-05 0.0023 10.0 0.0 129 148 57 76 27 80 0.91 # 57594 # 58304 # 1 # ID=1_74;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.667 1_74 - 237 SKI PF01202.17 158 2.9e-06 20.3 0.0 1 1 6.4e-08 7.5e-06 19.0 0.0 2 122 66 193 65 202 0.79 # 57594 # 58304 # 1 # ID=1_74;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.667 1_36 - 386 AAA_26 PF13500.1 199 2.9e-05 16.9 0.9 1 2 3.7e-06 0.00043 13.0 0.2 11 31 126 146 121 149 0.91 # 33954 # 35111 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.624 1_36 - 386 AAA_26 PF13500.1 199 2.9e-05 16.9 0.9 2 2 0.024 2.8 0.6 0.0 173 196 331 354 307 357 0.69 # 33954 # 35111 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.624 1_74 - 237 Zeta_toxin PF06414.7 201 2.9e-13 42.5 0.0 1 1 2.4e-14 9.5e-13 40.8 0.0 14 160 54 206 44 228 0.80 # 57594 # 58304 # 1 # ID=1_74;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.667 1_75 - 338 Zeta_toxin PF06414.7 201 1.9e-05 16.9 0.0 1 1 9.6e-07 3.7e-05 16.0 0.0 14 37 147 170 135 182 0.86 # 58510 # 59523 # 1 # ID=1_75;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.671 1_47 - 320 Zeta_toxin PF06414.7 201 0.00017 13.9 0.3 1 1 3.7e-05 0.0014 10.8 0.3 14 57 10 47 2 164 0.61 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_77 - 280 F420_oxidored PF03807.12 96 1.5e-05 18.5 0.2 1 1 5.7e-07 6.7e-05 16.4 0.0 2 81 6 81 5 90 0.80 # 60097 # 60936 # -1 # ID=1_77;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.720 1_36 - 386 VirC1 PF07015.6 231 0.0013 10.9 0.0 1 1 2.7e-05 0.0032 9.6 0.0 4 45 118 159 116 162 0.88 # 33954 # 35111 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.624 1_36 - 386 Fer4_NifH PF00142.13 273 1.3e-07 24.2 0.0 1 2 7.6e-07 8.9e-05 14.8 0.0 8 45 124 161 116 172 0.87 # 33954 # 35111 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.624 1_36 - 386 Fer4_NifH PF00142.13 273 1.3e-07 24.2 0.0 2 2 0.00017 0.02 7.2 0.0 183 245 321 383 306 385 0.84 # 33954 # 35111 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.624 1_74 - 237 AAA_16 PF13191.1 185 1.8e-07 24.4 0.1 1 1 9.7e-09 3.8e-07 23.4 0.1 8 46 40 78 38 207 0.83 # 57594 # 58304 # 1 # ID=1_74;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.667 1_47 - 320 AAA_16 PF13191.1 185 2.7e-05 17.4 0.1 1 1 1.3e-06 5.3e-05 16.4 0.1 25 135 13 158 8 186 0.59 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_75 - 338 AAA_16 PF13191.1 185 0.00023 14.3 0.0 1 1 2.4e-05 0.00094 12.3 0.0 9 47 130 171 128 199 0.82 # 58510 # 59523 # 1 # ID=1_75;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.671 1_47 - 320 AAA_23 PF13476.1 202 0.0011 12.4 0.0 1 1 3.1e-05 0.0018 11.7 0.0 20 36 13 29 6 30 0.90 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_5 - 669 AAA_23 PF13476.1 202 0.0015 12.0 0.0 1 1 9.3e-05 0.0054 10.2 0.0 18 53 79 115 60 132 0.79 # 6115 # 8121 # 1 # ID=1_5;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.684 1_74 - 237 AAA_18 PF13238.1 129 3.9e-12 39.7 0.0 1 1 4.8e-13 1.4e-11 37.9 0.0 1 116 59 180 59 192 0.76 # 57594 # 58304 # 1 # ID=1_74;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.667 1_76 - 190 AAA_18 PF13238.1 129 3.8e-06 20.4 0.0 1 1 5.1e-07 1.5e-05 18.5 0.0 1 115 7 134 7 151 0.69 # 59520 # 60089 # 1 # ID=1_76;partial=00;start_type=GTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.711 1_75 - 338 AAA_18 PF13238.1 129 0.00072 13.0 0.1 1 1 7e-05 0.0021 11.5 0.1 1 22 152 173 152 284 0.76 # 58510 # 59523 # 1 # ID=1_75;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.671 1_47 - 320 AAA_18 PF13238.1 129 0.0011 12.4 0.0 1 1 7.8e-05 0.0023 11.4 0.0 1 16 15 30 15 53 0.94 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_93 - 867 SecA_DEAD PF07517.9 266 1.8e-05 17.2 0.0 1 1 2.5e-07 3e-05 16.5 0.0 74 139 22 91 13 113 0.79 # 74516 # 77116 # -1 # ID=1_93;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.671 1_36 - 386 CbiA PF01656.18 195 3.8e-28 91.3 0.0 1 1 1.8e-29 2.1e-27 88.9 0.0 1 184 118 345 118 358 0.71 # 33954 # 35111 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.624 1_47 - 320 AAA_29 PF13555.1 62 4e-05 16.3 0.0 1 1 8.5e-07 9.9e-05 15.0 0.0 24 39 13 28 6 30 0.84 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_47 - 320 AAA PF00004.24 132 0.00054 13.3 1.4 1 2 0.00029 0.017 8.5 0.1 1 16 15 30 15 33 0.93 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_47 - 320 AAA PF00004.24 132 0.00054 13.3 1.4 2 2 0.0087 0.51 3.7 0.2 60 122 36 95 31 105 0.79 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_74 - 237 AAA PF00004.24 132 0.0014 12.0 0.0 1 1 3.8e-05 0.0022 11.3 0.0 1 18 59 76 59 92 0.89 # 57594 # 58304 # 1 # ID=1_74;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.667 1_76 - 190 MMR_HSR1 PF01926.18 116 0.00067 12.8 0.0 1 1 7e-06 0.00082 12.5 0.0 2 58 7 83 6 149 0.68 # 59520 # 60089 # 1 # ID=1_76;partial=00;start_type=GTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.711 1_47 - 320 DUF258 PF03193.11 161 0.00011 14.6 0.0 1 1 1.4e-06 0.00017 14.0 0.0 35 67 12 44 4 66 0.81 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_77 - 280 NAD_binding_2 PF03446.10 163 1.6e-08 27.7 0.3 1 1 3.8e-10 4.5e-08 26.2 0.3 4 162 6 159 3 160 0.86 # 60097 # 60936 # -1 # ID=1_77;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.720 1_36 - 386 AAA_31 PF13614.1 157 4e-10 33.0 0.3 1 1 9.4e-11 1.1e-08 28.3 0.0 8 132 123 257 116 264 0.84 # 33954 # 35111 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.624 1_74 - 237 AAA_33 PF13671.1 143 1.5e-22 73.2 0.0 1 1 6.7e-24 2e-22 72.8 0.0 2 143 59 204 58 204 0.88 # 57594 # 58304 # 1 # ID=1_74;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.667 1_47 - 320 AAA_33 PF13671.1 143 1.6e-20 66.6 0.1 1 1 7.9e-22 2.3e-20 66.1 0.1 1 139 14 140 14 146 0.90 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_75 - 338 AAA_33 PF13671.1 143 3.5e-15 49.3 0.0 1 1 3e-16 8.8e-15 48.0 0.0 1 139 151 300 151 303 0.90 # 58510 # 59523 # 1 # ID=1_75;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.671 1_76 - 190 AAA_33 PF13671.1 143 1.6e-08 27.7 0.0 1 1 1.5e-09 4.5e-08 26.2 0.0 2 139 7 149 7 153 0.71 # 59520 # 60089 # 1 # ID=1_76;partial=00;start_type=GTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.711 1_47 - 320 KTI12 PF08433.5 270 4e-07 22.6 0.0 1 1 1.4e-08 8e-07 21.6 0.0 3 127 14 131 9 164 0.87 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_74 - 237 KTI12 PF08433.5 270 0.00049 12.5 0.0 1 1 1.6e-05 0.00094 11.5 0.0 4 125 59 189 57 209 0.74 # 57594 # 58304 # 1 # ID=1_74;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.667 1_77 - 280 NAD_Gly3P_dh_N PF01210.18 157 0.0024 10.8 2.8 1 1 0.00082 0.096 5.5 2.8 2 29 6 32 5 157 0.78 # 60097 # 60936 # -1 # ID=1_77;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.720 1_77 - 280 2-Hacid_dh_C PF02826.14 178 1.2e-06 20.9 0.0 1 1 1.6e-08 1.9e-06 20.2 0.0 36 100 3 70 1 75 0.87 # 60097 # 60936 # -1 # ID=1_77;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.720 1_58 - 768 FtsK_SpoIIIE PF01580.13 205 0.00059 12.5 0.0 1 1 1e-05 0.0012 11.5 0.0 13 62 342 392 333 396 0.83 # 45704 # 48007 # -1 # ID=1_58;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.716 1_74 - 237 dNK PF01712.14 146 0.0014 11.7 0.0 1 1 1.6e-05 0.0018 11.3 0.0 65 91 155 179 131 216 0.85 # 57594 # 58304 # 1 # ID=1_74;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.667 1_47 - 320 6PF2K PF01591.13 223 0.00047 12.4 0.0 1 2 0.01 1.2 1.2 0.0 12 31 11 30 2 35 0.84 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_47 - 320 6PF2K PF01591.13 223 0.00047 12.4 0.0 2 2 4.9e-05 0.0057 8.8 0.0 100 130 78 108 64 120 0.85 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_47 - 320 ABC_tran PF00005.22 137 3.5e-05 17.2 0.0 1 1 7e-07 8.2e-05 16.1 0.0 9 29 10 30 6 34 0.87 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_76 - 190 TIGR03263 TIGR03263 180 2.1e-05 17.0 0.0 1 1 6.7e-07 3.9e-05 16.1 0.0 4 135 7 133 4 155 0.86 # 59520 # 60089 # 1 # ID=1_76;partial=00;start_type=GTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.711 1_47 - 320 TIGR03263 TIGR03263 180 0.00027 13.4 0.0 1 1 7.2e-06 0.00042 12.8 0.0 2 21 13 32 12 42 0.86 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_58 - 768 AAA_10 PF12846.2 304 4.6e-08 25.9 0.9 1 2 0.0005 0.058 5.9 0.3 7 39 375 407 372 411 0.83 # 45704 # 48007 # -1 # ID=1_58;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.716 1_58 - 768 AAA_10 PF12846.2 304 4.6e-08 25.9 0.9 2 2 8.3e-08 9.7e-06 18.3 0.0 203 275 433 521 423 546 0.67 # 45704 # 48007 # -1 # ID=1_58;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.716 1_93 - 867 ResIII PF04851.10 184 1.3e-08 28.0 0.0 1 1 9.1e-10 5.3e-08 26.0 0.0 3 92 23 112 21 124 0.84 # 74516 # 77116 # -1 # ID=1_93;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.671 1_2 - 831 ResIII PF04851.10 184 9.8e-07 21.9 0.0 1 1 4.2e-08 2.5e-06 20.6 0.0 52 183 4 153 2 154 0.74 # 1335 # 3827 # 1 # ID=1_2;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.714 1_93 - 867 DEAD PF00270.24 169 3.6e-07 22.9 0.0 1 1 1.1e-08 1.2e-06 21.2 0.0 10 75 38 100 25 175 0.72 # 74516 # 77116 # -1 # ID=1_93;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.671 1_76 - 190 CPT PF07931.7 174 5.8e-12 38.7 1.5 1 1 1.9e-12 7.4e-11 35.1 1.5 4 172 7 179 5 181 0.67 # 59520 # 60089 # 1 # ID=1_76;partial=00;start_type=GTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.711 1_74 - 237 CPT PF07931.7 174 1.7e-05 17.6 0.0 1 2 0.00037 0.014 8.1 0.0 3 23 58 78 56 92 0.91 # 57594 # 58304 # 1 # ID=1_74;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.667 1_74 - 237 CPT PF07931.7 174 1.7e-05 17.6 0.0 2 2 0.00051 0.02 7.6 0.0 79 131 124 177 103 188 0.79 # 57594 # 58304 # 1 # ID=1_74;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.667 1_75 - 338 CPT PF07931.7 174 0.00012 14.8 0.0 1 1 5.7e-06 0.00022 14.0 0.0 3 125 151 277 149 295 0.75 # 58510 # 59523 # 1 # ID=1_75;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.671 1_77 - 280 IlvN PF07991.7 165 0.00017 14.1 0.0 1 1 2.7e-06 0.00031 13.3 0.0 5 77 4 78 1 86 0.87 # 60097 # 60936 # -1 # ID=1_77;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.720 1_41 - 161 tRNA_anti-codon PF01336.20 75 0.0008 12.4 0.0 1 1 1.2e-05 0.0014 11.6 0.0 33 74 49 95 7 96 0.72 # 37624 # 38106 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.708 1_47 - 320 AAA_24 PF13479.1 213 0.00024 13.8 0.0 1 1 3.5e-06 0.00041 13.1 0.0 6 33 15 42 12 63 0.84 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_74 - 237 NACHT PF05729.7 166 0.00097 11.9 0.0 1 1 1.4e-05 0.0017 11.2 0.0 2 22 58 78 57 97 0.84 # 57594 # 58304 # 1 # ID=1_74;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.667 1_47 - 320 AAA_25 PF13481.1 194 6.8e-05 15.5 1.4 1 2 2.3e-06 0.00027 13.5 0.1 30 50 9 29 2 37 0.83 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_47 - 320 AAA_25 PF13481.1 194 6.8e-05 15.5 1.4 2 2 0.052 6.1 -0.7 0.1 145 175 37 67 30 84 0.83 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_93 - 867 Helicase_C_2 PF13307.1 167 1.6e-10 34.3 0.0 1 1 2.7e-12 3.1e-10 33.4 0.0 9 164 347 486 340 492 0.76 # 74516 # 77116 # -1 # ID=1_93;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.671 1_74 - 237 AAA_28 PF13521.1 163 9.2e-07 22.1 0.0 1 1 1.3e-08 1.6e-06 21.3 0.0 2 61 59 120 58 155 0.76 # 57594 # 58304 # 1 # ID=1_74;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.667 1_47 - 320 AAA_5 PF07728.9 139 0.00066 12.5 0.1 1 2 2.1e-05 0.0025 10.7 0.0 2 18 15 31 14 35 0.92 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_47 - 320 AAA_5 PF07728.9 139 0.00066 12.5 0.1 2 2 0.099 12 -1.2 0.0 80 108 59 85 54 114 0.64 # 40231 # 41190 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.705 1_74 - 237 APS_kinase PF01583.15 157 7.9e-05 15.5 0.0 1 1 1.7e-06 0.00019 14.2 0.0 4 25 58 79 55 88 0.88 # 57594 # 58304 # 1 # ID=1_74;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.667 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/66520d2e-9d67-4f4b-8659-56d5ab74044e # Target file: checkm_output/bins/pAY211023.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pAY211023.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/66520d2e-9d67-4f4b-8659-56d5ab74044e checkm_output/bins/pAY211023.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:36:13 2020 # [ok]