# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 633 AIG1 PF04548.11 212 2.4e-06 13.2 0.0 1 1 6e-06 6e-06 11.8 0.0 32 62 49 79 41 107 0.83 # 1 # 1899 # 1 # ID=1_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 1_1 - 633 Septin PF00735.13 281 3e-06 12.7 0.1 1 1 5.4e-06 5.4e-06 11.9 0.1 9 77 6 80 2 88 0.68 # 1 # 1899 # 1 # ID=1_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 1_1 - 633 Miro PF08477.8 119 5.8e-08 19.7 0.0 1 1 1.4e-07 1.4e-07 18.5 0.0 9 119 11 129 4 129 0.75 # 1 # 1899 # 1 # ID=1_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 1_1 - 633 TIGR03594 TIGR03594 432 8.2e-11 27.5 0.2 1 3 0.072 0.072 -2.0 0.0 177 211 3 40 2 48 0.70 # 1 # 1899 # 1 # ID=1_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 1_1 - 633 TIGR03594 TIGR03594 432 8.2e-11 27.5 0.2 2 3 8.4e-09 8.4e-09 20.8 0.1 30 123 48 133 38 152 0.87 # 1 # 1899 # 1 # ID=1_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 1_1 - 633 TIGR03594 TIGR03594 432 8.2e-11 27.5 0.2 3 3 0.0015 0.0015 3.6 0.0 304 349 194 239 184 267 0.81 # 1 # 1899 # 1 # ID=1_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 1_1 - 633 MMR_HSR1 PF01926.18 116 2.3e-10 27.0 0.1 1 1 4.3e-10 4.3e-10 26.1 0.1 4 116 6 127 3 127 0.68 # 1 # 1899 # 1 # ID=1_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 1_1 - 633 GTP_EFTU_D2 PF03144.20 74 1.1e-10 28.1 0.0 1 1 2.3e-10 2.3e-10 27.0 0.0 3 60 263 314 261 321 0.90 # 1 # 1899 # 1 # ID=1_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 1_1 - 633 GTP_EFTU PF00009.22 188 3.9e-61 192.1 0.3 1 1 5.7e-61 5.7e-61 191.6 0.3 3 185 1 235 1 238 0.92 # 1 # 1899 # 1 # ID=1_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 1_1 - 633 EFG_IV PF03764.13 120 9.1e-28 82.7 0.0 1 1 3.4e-27 3.4e-27 80.9 0.0 1 120 414 530 414 530 0.98 # 1 # 1899 # 1 # ID=1_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/fd866851-ab51-40a2-9a7d-1917016b8288 # Target file: checkm_output/bins/pAY190525.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pAY190525.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/fd866851-ab51-40a2-9a7d-1917016b8288 checkm_output/bins/pAY190525.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:36:08 2020 # [ok]