#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
1_2                  -            197 MipZ                 PF09140.6    261   6.5e-11   30.4   1.3   1   1   1.9e-10   9.7e-10   26.5   1.3     2   115     2   117     1   119 0.66 # 242 # 832 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574
1_2                  -            197 SRP54                PF00448.17   196   3.5e-05   12.0   0.6   1   1   1.2e-05   5.8e-05   11.2   0.6    11    39    11    39     3    45 0.89 # 242 # 832 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574
1_2                  -            197 ArsA_ATPase          PF02374.10   305   4.8e-06   14.4   0.6   1   1   1.3e-06   6.3e-06   14.0   0.6     6    38     6    38     1    42 0.87 # 242 # 832 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574
1_2                  -            197 VirC1                PF07015.6    231   7.1e-11   30.2   0.0   1   1   2.3e-11   1.2e-10   29.5   0.0     3   120     2   115     1   167 0.89 # 242 # 832 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574
1_2                  -            197 Fer4_NifH            PF00142.13   273   3.9e-06   14.8   0.1   1   1   1.1e-06   5.6e-06   14.3   0.1     3    36     4    37     2    43 0.89 # 242 # 832 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574
1_2                  -            197 CbiA                 PF01656.18   195   5.6e-19   56.9   0.1   1   1     2e-19     1e-18   56.1   0.1     1   188     3   164     3   171 0.68 # 242 # 832 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574
1_2                  -            197 AAA_31               PF13614.1    157   8.5e-07   17.7   0.0   1   2   9.9e-07     5e-06   15.2   0.0     3    44     3    44     1    55 0.85 # 242 # 832 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574
1_2                  -            197 AAA_31               PF13614.1    157   8.5e-07   17.7   0.0   2   2     0.043      0.22    0.1   0.0   120   154    81   114    79   117 0.76 # 242 # 832 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574
1_2                  -            197 AAA_25               PF13481.1    194   1.9e-05   12.8   0.0   1   1   6.7e-06   3.3e-05   12.0   0.0    36    65     4    34     2   104 0.83 # 242 # 832 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574
#
# Program:         hmmsearch
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SEARCH
# Query file:      /tmp/3b0410bd-4376-40ce-8aa8-1699b729a3f8
# Target file:     checkm_output/bins/pAY061891.1.assembled/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pAY061891.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/3b0410bd-4376-40ce-8aa8-1699b729a3f8 checkm_output/bins/pAY061891.1.assembled/genes.faa 
# Current dir:     /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2
# Date:            Tue Jul  7 16:36:01 2020
# [ok]