# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_9 - 195 MipZ PF09140.6 261 3.2e-10 29.1 1.5 1 1 4.2e-09 4.2e-08 22.1 1.5 5 138 5 116 1 128 0.79 # 6581 # 7165 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.595 1_9 - 195 ArsA_ATPase PF02374.10 305 8.1e-08 21.2 0.1 1 1 1.2e-08 1.2e-07 20.7 0.1 1 43 1 43 1 55 0.92 # 6581 # 7165 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.595 1_9 - 195 VirC1 PF07015.6 231 1.4e-12 36.8 0.1 1 1 4.2e-13 4.2e-12 35.2 0.1 4 128 3 121 1 126 0.84 # 6581 # 7165 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.595 1_9 - 195 CbiA PF01656.18 195 1.3e-19 60.0 0.0 1 1 3.1e-20 3.1e-19 58.7 0.0 2 190 4 164 3 169 0.75 # 6581 # 7165 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.595 1_9 - 195 AAA_31 PF13614.1 157 0.00011 11.8 0.0 1 2 0.00041 0.0041 6.7 0.0 8 40 8 40 2 51 0.81 # 6581 # 7165 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.595 1_9 - 195 AAA_31 PF13614.1 157 0.00011 11.8 0.0 2 2 0.0049 0.049 3.2 0.0 120 155 79 113 66 115 0.87 # 6581 # 7165 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.595 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/8b9fa565-9651-4acb-891e-cae4a9155043 # Target file: checkm_output/bins/pAY048596.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pAY048596.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/8b9fa565-9651-4acb-891e-cae4a9155043 checkm_output/bins/pAY048596.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:36:00 2020 # [ok]