# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 212 TraG-D_C PF12696.2 128 1.1e-05 13.7 0.1 1 1 5.5e-06 2.2e-05 12.7 0.1 5 80 51 127 48 162 0.78 # 1 # 636 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.296 1_1 - 212 AAA_10 PF12846.2 304 3.6e-18 54.3 0.1 1 1 1.1e-18 4.6e-18 53.9 0.1 176 304 6 131 1 131 0.95 # 1 # 636 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.296 1_1 - 212 TrwB_AAD_bind PF10412.4 386 2e-10 28.0 0.0 1 1 6e-11 2.4e-10 27.8 0.0 222 366 24 167 14 184 0.75 # 1 # 636 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.296 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/932c3239-2547-42bb-8da1-61f918ff4044 # Target file: checkm_output/bins/pAVFM02000080.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pAVFM02000080.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/932c3239-2547-42bb-8da1-61f918ff4044 checkm_output/bins/pAVFM02000080.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:35:59 2020 # [ok]