# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 154 SSB PF00436.20 104 1e-27 84.1 0.1 1 1 4.5e-28 1.4e-27 83.7 0.1 1 103 1 104 1 105 0.98 # 277 # 738 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/7b7c0f95-dad3-4676-a9ff-015691c6f748 # Target file: checkm_output/bins/pAVFM02000076.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pAVFM02000076.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/7b7c0f95-dad3-4676-a9ff-015691c6f748 checkm_output/bins/pAVFM02000076.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:35:56 2020 # [ok]