# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_3 - 654 Methyltransf_26 PF13659.1 117 1.2e-14 43.1 0.0 1 1 4e-15 2e-14 42.4 0.0 3 116 312 422 310 423 0.84 # 834 # 2795 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.301 1_3 - 654 MTS PF05175.9 170 7.3e-07 17.4 0.0 1 1 3.1e-07 1.6e-06 16.3 0.0 32 142 310 423 302 443 0.76 # 834 # 2795 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.301 1_3 - 654 Eco57I PF07669.6 106 1.9e-10 29.8 0.3 1 1 1.5e-10 7.6e-10 27.9 0.3 3 104 372 473 369 475 0.84 # 834 # 2795 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.301 1_4 - 442 ResIII PF04851.10 184 3.5e-14 41.7 8.5 1 1 4e-13 2e-12 36.0 8.5 2 159 205 399 204 402 0.59 # 3218 # 4543 # 1 # ID=1_4;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.281 1_4 - 442 DEAD PF00270.24 169 1.4e-10 29.6 0.2 1 1 3.4e-09 1.7e-08 22.8 0.2 2 107 209 315 208 412 0.74 # 3218 # 4543 # 1 # ID=1_4;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.281 1_4 - 442 AAA_11 PF13086.1 236 1.9e-05 12.9 3.3 1 1 1.9e-05 9.3e-05 10.7 3.3 2 201 207 395 206 401 0.60 # 3218 # 4543 # 1 # ID=1_4;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.281 1_4 - 442 SNF2_N PF00176.18 299 8.7e-15 42.8 1.0 1 1 3.1e-15 1.5e-14 42.0 1.0 23 148 219 400 158 408 0.75 # 3218 # 4543 # 1 # ID=1_4;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.281 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/7d39ff3b-dd9e-4ccd-a3ab-7fccca81cc67 # Target file: checkm_output/bins/pAVFM02000073.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pAVFM02000073.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/7d39ff3b-dd9e-4ccd-a3ab-7fccca81cc67 checkm_output/bins/pAVFM02000073.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:35:54 2020 # [ok]