# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_23 - 428 MipZ PF09140.6 261 1.2e-06 20.5 0.0 1 2 5.5e-06 0.00051 11.9 0.0 2 27 117 142 116 176 0.84 # 25214 # 26497 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_23 - 428 MipZ PF09140.6 261 1.2e-06 20.5 0.0 2 2 0.00028 0.026 6.3 0.0 84 108 270 294 248 301 0.81 # 25214 # 26497 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 2_25 - 892 NB-ARC PF00931.17 287 0.00033 12.3 0.3 1 2 1.8e-05 0.0017 10.0 0.0 19 37 59 77 51 82 0.85 # 25933 # 28608 # 1 # ID=2_25;partial=00;start_type=GTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.725 2_25 - 892 NB-ARC PF00931.17 287 0.00033 12.3 0.3 2 2 0.045 4.1 -1.1 0.1 127 140 873 886 863 888 0.78 # 25933 # 28608 # 1 # ID=2_25;partial=00;start_type=GTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.725 2_17 - 678 AAA_22 PF13401.1 131 6e-06 19.3 0.0 1 1 5.1e-06 0.00016 14.7 0.0 3 127 97 267 93 270 0.71 # 15062 # 17095 # -1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 2_22 - 613 AAA_22 PF13401.1 131 9.4e-05 15.4 0.0 1 2 0.0013 0.041 6.9 0.0 6 28 41 63 35 129 0.87 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 2_22 - 613 AAA_22 PF13401.1 131 9.4e-05 15.4 0.0 2 2 0.0027 0.083 5.9 0.0 3 27 336 360 334 419 0.84 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 1_36 - 319 AAA_22 PF13401.1 131 0.00011 15.1 0.0 1 1 1.3e-05 0.00039 13.4 0.0 4 22 11 29 7 36 0.91 # 34527 # 35483 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.717 1_26 - 147 ATP_bind_2 PF03668.10 284 1.2e-10 33.7 0.0 1 1 2.4e-12 2.2e-10 32.8 0.0 175 280 23 121 3 125 0.88 # 28359 # 28799 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.721 1_36 - 319 AAA_17 PF13207.1 121 1.2e-05 18.9 0.3 1 1 1.3e-06 6.2e-05 16.6 0.3 2 77 14 81 13 185 0.60 # 34527 # 35483 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.717 2_22 - 613 AAA_17 PF13207.1 121 4.3e-05 17.2 1.0 1 2 0.00011 0.0051 10.5 0.8 3 23 43 63 40 336 0.88 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 2_22 - 613 AAA_17 PF13207.1 121 4.3e-05 17.2 1.0 2 2 0.017 0.81 3.4 0.0 3 47 341 389 339 483 0.55 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 1_2 - 886 Helicase_C PF00271.26 78 2.1e-07 23.6 0.1 1 1 9.2e-09 4.3e-07 22.6 0.1 11 77 371 448 366 449 0.90 # 1036 # 3693 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.696 2_17 - 678 Helicase_C PF00271.26 78 0.00036 13.2 0.0 1 1 2.2e-05 0.001 11.8 0.0 23 76 415 468 400 469 0.95 # 15062 # 17095 # -1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 1_23 - 428 ArsA_ATPase PF02374.10 305 6.7e-07 21.4 2.4 1 3 3.4e-07 3.2e-05 15.9 0.1 2 27 117 142 116 146 0.85 # 25214 # 26497 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_23 - 428 ArsA_ATPase PF02374.10 305 6.7e-07 21.4 2.4 2 3 0.0013 0.12 4.1 0.0 110 136 269 294 175 298 0.78 # 25214 # 26497 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_23 - 428 ArsA_ATPase PF02374.10 305 6.7e-07 21.4 2.4 3 3 0.087 8.1 -1.9 0.1 233 274 349 391 331 402 0.62 # 25214 # 26497 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_23 - 428 AAA_26 PF13500.1 199 9.9e-06 18.0 0.0 1 1 5.4e-07 5.1e-05 15.7 0.0 2 108 117 293 116 418 0.82 # 25214 # 26497 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 2_22 - 613 Zeta_toxin PF06414.7 201 4.4e-80 260.3 2.1 1 3 8.9e-48 4.1e-46 149.4 0.1 10 200 33 222 26 223 0.96 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 2_22 - 613 Zeta_toxin PF06414.7 201 4.4e-80 260.3 2.1 2 3 0.016 0.74 1.6 0.4 108 156 251 295 246 321 0.79 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 2_22 - 613 Zeta_toxin PF06414.7 201 4.4e-80 260.3 2.1 3 3 7.3e-35 3.4e-33 107.2 0.0 10 194 331 514 325 520 0.96 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 1_36 - 319 Zeta_toxin PF06414.7 201 1.1e-07 23.9 0.0 1 2 0.00015 0.007 8.2 0.0 17 35 12 30 2 43 0.84 # 34527 # 35483 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.717 1_36 - 319 Zeta_toxin PF06414.7 201 1.1e-07 23.9 0.0 2 2 3.4e-06 0.00016 13.6 0.0 79 179 59 151 53 164 0.86 # 34527 # 35483 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.717 2_22 - 613 AAA_16 PF13191.1 185 4.8e-09 29.2 1.1 1 2 4.7e-06 0.00011 15.0 0.1 17 119 31 133 19 183 0.63 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 2_22 - 613 AAA_16 PF13191.1 185 4.8e-09 29.2 1.1 2 2 4.3e-05 0.001 11.9 0.1 18 106 331 427 325 559 0.70 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 2_33 - 890 AAA_16 PF13191.1 185 5.5e-05 16.0 0.0 1 1 2.4e-06 5.5e-05 16.0 0.0 15 57 142 183 137 201 0.82 # 34334 # 37003 # 1 # ID=2_33;partial=00;start_type=GTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.739 1_36 - 319 AAA_16 PF13191.1 185 0.00012 14.9 0.6 1 1 1e-05 0.00024 13.9 0.6 24 43 11 30 5 178 0.87 # 34527 # 35483 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.717 2_25 - 892 AAA_16 PF13191.1 185 0.006 9.4 12.1 1 1 1.1e-05 0.00026 13.8 1.7 2 52 23 95 22 296 0.53 # 25933 # 28608 # 1 # ID=2_25;partial=00;start_type=GTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.725 1_36 - 319 AAA_23 PF13476.1 202 0.00032 13.9 0.0 1 1 5.3e-06 0.00049 13.2 0.0 18 36 10 28 4 29 0.89 # 34527 # 35483 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.717 2_22 - 613 AAA_18 PF13238.1 129 2.1e-05 17.7 0.0 1 2 0.00025 0.012 8.8 0.0 2 20 43 61 43 134 0.74 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 2_22 - 613 AAA_18 PF13238.1 129 2.1e-05 17.7 0.0 2 2 0.0013 0.06 6.5 0.0 1 80 340 421 340 448 0.75 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 1_36 - 319 AAA_18 PF13238.1 129 0.016 8.3 4.4 1 1 9.2e-05 0.0043 10.2 0.5 1 16 14 29 14 30 0.95 # 34527 # 35483 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.717 1_23 - 428 CbiA PF01656.18 195 1.8e-23 75.7 0.4 1 2 3.8e-10 3.5e-08 25.9 0.2 1 25 118 142 118 150 0.89 # 25214 # 26497 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_23 - 428 CbiA PF01656.18 195 1.8e-23 75.7 0.4 2 2 2e-16 1.8e-14 46.3 0.0 19 184 177 387 173 403 0.74 # 25214 # 26497 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_36 - 319 AAA_29 PF13555.1 62 4.9e-05 15.7 0.0 1 1 1.1e-06 0.0001 14.6 0.0 21 39 10 27 4 29 0.84 # 34527 # 35483 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.717 2_22 - 613 AAA PF00004.24 132 0.00063 12.8 0.0 1 2 0.00089 0.083 5.9 0.0 3 22 44 63 43 117 0.84 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 2_22 - 613 AAA PF00004.24 132 0.00063 12.8 0.0 2 2 0.0027 0.25 4.4 0.0 1 23 340 362 340 432 0.84 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 1_36 - 319 DUF258 PF03193.11 161 0.00011 14.2 0.0 1 1 2.1e-06 0.00019 13.4 0.0 35 54 11 30 2 64 0.82 # 34527 # 35483 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.717 1_23 - 428 AAA_31 PF13614.1 157 0.0002 14.1 0.1 1 2 0.0017 0.16 4.7 0.0 2 28 117 143 116 155 0.86 # 25214 # 26497 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_23 - 428 AAA_31 PF13614.1 157 0.0002 14.1 0.1 2 2 0.00061 0.057 6.1 0.0 107 129 274 296 259 302 0.86 # 25214 # 26497 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.639 1_36 - 319 AAA_33 PF13671.1 143 7.4e-21 67.3 0.1 1 1 3.7e-22 1.1e-20 66.7 0.1 1 135 13 139 13 147 0.86 # 34527 # 35483 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.717 2_22 - 613 AAA_33 PF13671.1 143 2.7e-06 20.1 9.6 1 2 2.7e-06 8.3e-05 15.3 0.1 3 122 43 170 41 179 0.78 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 2_22 - 613 AAA_33 PF13671.1 143 2.7e-06 20.1 9.6 2 2 0.0002 0.0061 9.2 0.0 2 120 340 464 339 481 0.74 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 2_25 - 892 AAA_33 PF13671.1 143 0.00033 13.3 0.0 1 1 4.9e-05 0.0015 11.2 0.0 1 24 61 84 61 92 0.89 # 25933 # 28608 # 1 # ID=2_25;partial=00;start_type=GTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.725 1_36 - 319 KTI12 PF08433.5 270 1.6e-06 20.2 0.0 1 1 7.6e-08 7e-06 18.2 0.0 3 131 13 134 12 176 0.81 # 34527 # 35483 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.717 2_22 - 613 AAA_30 PF13604.1 196 4.3e-06 19.2 1.3 1 2 1.1e-05 0.00052 12.4 1.1 9 51 29 72 27 151 0.67 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 2_22 - 613 AAA_30 PF13604.1 196 4.3e-06 19.2 1.3 2 2 0.0055 0.26 3.6 0.0 19 51 338 370 332 419 0.84 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 2_17 - 678 AAA_30 PF13604.1 196 0.0003 13.2 0.1 1 1 3.5e-05 0.0016 10.8 0.1 12 65 93 147 80 229 0.79 # 15062 # 17095 # -1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 1_36 - 319 ABC_tran PF00005.22 137 5.2e-05 16.4 0.0 1 1 1e-06 9.7e-05 15.5 0.0 8 29 8 29 4 31 0.87 # 34527 # 35483 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.717 2_22 - 613 AAA_19 PF13245.1 76 2.7e-07 23.1 1.8 1 2 8.1e-06 0.00025 13.6 0.7 3 37 30 65 28 105 0.75 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 2_22 - 613 AAA_19 PF13245.1 76 2.7e-07 23.1 1.8 2 2 0.0013 0.039 6.6 0.0 13 36 340 362 332 377 0.80 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 2_17 - 678 AAA_19 PF13245.1 76 4e-06 19.4 0.1 1 1 9.5e-07 2.9e-05 16.6 0.0 7 50 94 136 89 148 0.75 # 15062 # 17095 # -1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 1_2 - 886 AAA_19 PF13245.1 76 0.00054 12.5 2.4 1 1 2.3e-05 0.00073 12.1 0.4 17 51 40 69 30 91 0.82 # 1036 # 3693 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.696 1_36 - 319 AAA_10 PF12846.2 304 0.00021 13.6 0.0 1 1 3e-06 0.00028 13.1 0.0 1 38 11 51 11 79 0.85 # 34527 # 35483 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.717 1_2 - 886 ResIII PF04851.10 184 1.5e-16 53.5 0.0 1 1 1.1e-17 5.2e-16 51.8 0.0 23 183 31 211 4 212 0.76 # 1036 # 3693 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.696 2_17 - 678 ResIII PF04851.10 184 1.8e-10 33.7 0.0 1 1 8e-12 3.7e-10 32.7 0.0 1 74 76 152 76 266 0.77 # 15062 # 17095 # -1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 2_17 - 678 DEAD PF00270.24 169 3.3e-08 26.0 0.0 1 1 3.8e-09 1.8e-07 23.6 0.0 3 166 82 269 80 272 0.63 # 15062 # 17095 # -1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 1_2 - 886 DEAD PF00270.24 169 1.6e-07 23.7 0.0 1 1 1.7e-08 8e-07 21.5 0.0 19 133 38 183 26 213 0.61 # 1036 # 3693 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.696 1_36 - 319 CPT PF07931.7 174 0.00083 11.8 0.8 1 2 0.00016 0.014 7.8 0.2 3 19 13 29 11 34 0.92 # 34527 # 35483 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.717 1_36 - 319 CPT PF07931.7 174 0.00083 11.8 0.8 2 2 0.0072 0.67 2.3 0.0 81 135 72 128 60 162 0.71 # 34527 # 35483 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.717 2_22 - 613 ArgK PF03308.11 267 0.0014 10.1 1.5 1 2 4.7e-05 0.0044 8.6 0.1 14 62 17 72 10 73 0.67 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 2_22 - 613 ArgK PF03308.11 267 0.0014 10.1 1.5 2 2 0.048 4.5 -1.3 0.0 179 212 264 297 258 307 0.82 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 1_36 - 319 AAA_24 PF13479.1 213 0.0012 11.3 0.0 1 1 2.2e-05 0.002 10.5 0.0 6 32 14 40 10 79 0.88 # 34527 # 35483 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.717 2_17 - 678 UvrD-helicase PF00580.16 315 0.00032 12.8 0.4 1 1 7.6e-06 0.0007 11.7 0.0 9 47 94 132 88 141 0.82 # 15062 # 17095 # -1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.644 1_36 - 319 AAA_25 PF13481.1 194 8.1e-05 14.9 0.1 1 1 5.9e-06 0.00018 13.7 0.1 26 50 4 28 2 30 0.89 # 34527 # 35483 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.717 1_2 - 886 AAA_25 PF13481.1 194 0.00026 13.2 0.3 1 1 2.6e-05 0.00082 11.6 0.3 31 65 31 65 20 83 0.88 # 1036 # 3693 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.696 2_22 - 613 AAA_25 PF13481.1 194 0.0006 12.0 2.6 1 2 0.00044 0.014 7.6 0.0 33 58 39 63 28 129 0.88 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 2_22 - 613 AAA_25 PF13481.1 194 0.0006 12.0 2.6 2 2 0.019 0.58 2.3 1.2 56 120 194 262 187 305 0.54 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 1_36 - 319 AAA_28 PF13521.1 163 0.00014 14.6 0.1 1 2 9.8e-06 0.00091 12.0 0.0 2 17 14 29 13 79 0.95 # 34527 # 35483 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.717 1_36 - 319 AAA_28 PF13521.1 163 0.00014 14.6 0.1 2 2 0.064 6 -0.4 0.0 35 79 116 159 91 162 0.65 # 34527 # 35483 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.717 2_22 - 613 AAA_5 PF07728.9 139 0.00053 12.5 0.1 1 2 0.00029 0.027 7.0 0.0 5 26 45 66 43 77 0.83 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 2_22 - 613 AAA_5 PF07728.9 139 0.00053 12.5 0.1 2 2 0.0062 0.57 2.7 0.0 2 23 340 361 339 372 0.81 # 22751 # 24589 # 1 # ID=2_22;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.737 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/5f62d787-c39b-416a-8019-cd302b594c5a # Target file: checkm_output/bins/pAP005645.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pAP005645.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/5f62d787-c39b-416a-8019-cd302b594c5a checkm_output/bins/pAP005645.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:35:52 2020 # [ok]