# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_9 - 773 AAA_22 PF13401.1 131 8.9e-06 16.1 0.0 1 1 2.7e-06 4.1e-05 14.0 0.0 5 100 428 540 424 569 0.65 # 5823 # 8141 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.726 1_9 - 773 FtsK_SpoIIIE PF01580.13 205 2.5e-34 108.7 0.0 1 1 3.1e-35 4.7e-34 107.8 0.0 20 205 410 576 401 576 0.92 # 5823 # 8141 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.726 1_9 - 773 AAA_10 PF12846.2 304 3.1e-10 30.1 0.2 1 2 6.4e-05 0.00096 8.8 0.1 3 38 429 465 427 484 0.74 # 5823 # 8141 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.726 1_9 - 773 AAA_10 PF12846.2 304 3.1e-10 30.1 0.2 2 2 4.1e-08 6.1e-07 19.3 0.0 193 294 485 602 474 607 0.82 # 5823 # 8141 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.726 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/0337c106-f943-4b90-a0b2-5abdb36c39f9 # Target file: checkm_output/bins/pAM087403.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pAM087403.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/0337c106-f943-4b90-a0b2-5abdb36c39f9 checkm_output/bins/pAM087403.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:35:47 2020 # [ok]