# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_4 - 221 AAA_21 PF13304.1 303 2.5e-13 41.1 6.7 1 1 2.5e-11 4.7e-10 30.4 6.7 4 300 38 194 36 197 0.65 # 3117 # 3779 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.262 2_4 - 221 SMC_N PF02463.14 220 1.5e-07 21.3 0.9 1 2 2.9e-05 0.00054 9.7 0.2 26 45 35 54 12 83 0.78 # 3117 # 3779 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.262 2_4 - 221 SMC_N PF02463.14 220 1.5e-07 21.3 0.9 2 2 1.9e-05 0.00037 10.3 0.0 149 203 143 197 133 210 0.89 # 3117 # 3779 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.262 2_4 - 221 AAA_23 PF13476.1 202 2.5e-05 15.2 6.5 1 1 3e-06 5.7e-05 14.0 6.4 11 66 24 78 9 208 0.51 # 3117 # 3779 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.262 2_1 - 412 AAA_13 PF13166.1 712 0.00059 8.8 33.0 1 2 0.00047 0.009 4.9 2.6 395 443 40 88 9 125 0.67 # 130 # 1365 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.348 2_1 - 412 AAA_13 PF13166.1 712 0.00059 8.8 33.0 2 2 1.7e-05 0.00032 9.7 22.6 312 482 211 388 175 405 0.77 # 130 # 1365 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.348 2_4 - 221 MMR_HSR1 PF01926.18 116 0.00023 11.7 2.0 1 1 5.2e-05 0.00098 9.7 2.0 3 35 37 68 35 219 0.60 # 3117 # 3779 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.262 2_4 - 221 ABC_tran PF00005.22 137 3.7e-30 95.6 0.0 1 1 2.7e-31 5.1e-30 95.1 0.0 1 137 23 163 23 163 0.90 # 3117 # 3779 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.262 2_4 - 221 SbcCD_C PF13558.1 90 0.0002 11.9 0.0 1 1 1.7e-05 0.00032 11.2 0.0 61 84 150 173 132 179 0.73 # 3117 # 3779 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.262 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/8cec15dd-0d60-4c14-80ee-58e38fd25ff0 # Target file: checkm_output/bins/pAJ871638.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pAJ871638.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/8cec15dd-0d60-4c14-80ee-58e38fd25ff0 checkm_output/bins/pAJ871638.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:35:46 2020 # [ok]