# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_8 - 252 DUF87 PF01935.12 229 0.044 3.0 15.2 1 2 0.014 0.13 1.5 0.6 119 184 69 152 36 165 0.53 # 6300 # 7055 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.470 1_8 - 252 DUF87 PF01935.12 229 0.044 3.0 15.2 2 2 0.0012 0.011 5.1 9.7 112 195 162 246 148 250 0.76 # 6300 # 7055 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.470 1_8 - 252 Val_tRNA-synt_C PF10458.4 66 0.011 5.4 17.1 1 5 0.003 0.027 4.2 0.0 10 32 5 27 2 30 0.92 # 6300 # 7055 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.470 1_8 - 252 Val_tRNA-synt_C PF10458.4 66 0.011 5.4 17.1 2 5 0.085 0.76 -0.5 0.1 4 19 64 79 63 94 0.70 # 6300 # 7055 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.470 1_8 - 252 Val_tRNA-synt_C PF10458.4 66 0.011 5.4 17.1 3 5 0.048 0.44 0.3 1.2 62 64 163 165 127 184 0.61 # 6300 # 7055 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.470 1_8 - 252 Val_tRNA-synt_C PF10458.4 66 0.011 5.4 17.1 4 5 0.037 0.33 0.7 0.5 9 26 166 183 158 198 0.62 # 6300 # 7055 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.470 1_8 - 252 Val_tRNA-synt_C PF10458.4 66 0.011 5.4 17.1 5 5 0.00057 0.0051 6.5 3.1 2 27 201 226 200 228 0.95 # 6300 # 7055 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.470 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/d186ef75-1a64-48f6-91b5-5ce2d963da57 # Target file: checkm_output/bins/pAJ577855.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pAJ577855.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/d186ef75-1a64-48f6-91b5-5ce2d963da57 checkm_output/bins/pAJ577855.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:35:45 2020 # [ok]