# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 405 Seryl_tRNA_N PF02403.17 108 0.0026 5.8 22.9 1 3 0.092 0.28 -0.7 2.2 42 66 37 61 2 101 0.61 # 89 # 1303 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=7bp;gc_cont=0.328 1_2 - 405 Seryl_tRNA_N PF02403.17 108 0.0026 5.8 22.9 2 3 0.00015 0.00045 8.3 2.8 27 105 157 232 148 235 0.68 # 89 # 1303 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=7bp;gc_cont=0.328 1_2 - 405 Seryl_tRNA_N PF02403.17 108 0.0026 5.8 22.9 3 3 9e-05 0.00027 9.0 2.7 23 84 300 358 284 366 0.70 # 89 # 1303 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=7bp;gc_cont=0.328 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/4410f2c2-7d62-438a-ada4-ee9b774b9ff3 # Target file: checkm_output/bins/pAJ272266.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pAJ272266.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/4410f2c2-7d62-438a-ada4-ee9b774b9ff3 checkm_output/bins/pAJ272266.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:35:40 2020 # [ok]