# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_8 - 196 MipZ PF09140.6 261 7.8e-09 24.4 2.5 1 1 1.8e-07 1.6e-06 16.8 2.5 5 138 5 117 1 133 0.76 # 6614 # 7201 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.600 1_8 - 196 ArsA_ATPase PF02374.10 305 3.3e-07 19.0 0.1 1 1 5.2e-08 4.7e-07 18.5 0.1 1 43 1 44 1 58 0.84 # 6614 # 7201 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.600 1_8 - 196 VirC1 PF07015.6 231 9.1e-13 37.2 0.1 1 1 3e-13 2.7e-12 35.7 0.1 4 128 3 122 1 127 0.83 # 6614 # 7201 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.600 1_8 - 196 CbiA PF01656.18 195 4e-19 58.2 0.0 1 1 1.2e-19 1.1e-18 56.8 0.0 2 190 4 165 3 170 0.75 # 6614 # 7201 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.600 1_8 - 196 AAA_31 PF13614.1 157 2.5e-05 13.7 0.1 1 2 0.00011 0.00095 8.6 0.0 8 39 8 40 2 49 0.80 # 6614 # 7201 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.600 1_8 - 196 AAA_31 PF13614.1 157 2.5e-05 13.7 0.1 2 2 0.0051 0.046 3.2 0.0 120 155 80 114 68 116 0.87 # 6614 # 7201 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.600 1_8 - 196 NAD_binding_10 PF13460.1 183 0.00012 11.6 2.0 1 2 0.034 0.31 0.5 0.7 5 28 10 33 9 46 0.89 # 6614 # 7201 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.600 1_8 - 196 NAD_binding_10 PF13460.1 183 0.00012 11.6 2.0 2 2 2.9e-05 0.00026 10.5 0.0 25 120 62 161 42 175 0.73 # 6614 # 7201 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.600 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/862fc128-a79b-42c2-ad7d-c813e89c4cb9 # Target file: checkm_output/bins/pAF364477.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pAF364477.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/862fc128-a79b-42c2-ad7d-c813e89c4cb9 checkm_output/bins/pAF364477.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:35:33 2020 # [ok]