# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 211 AAA_13 PF13166.1 712 0.0014 5.9 28.3 1 1 0.00036 0.0021 5.3 28.2 284 438 32 194 17 203 0.76 # 1361 # 1993 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=3bp;gc_cont=0.306 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/4ef688dc-caa5-4d32-b683-8b8c642975c8 # Target file: checkm_output/bins/pAF207855.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pAF207855.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/4ef688dc-caa5-4d32-b683-8b8c642975c8 checkm_output/bins/pAF207855.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:35:29 2020 # [ok]