# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 215 AAA_23 PF13476.1 202 0.0089 5.5 29.2 1 1 0.0019 0.013 4.9 29.2 93 202 64 194 6 202 0.61 # 1286 # 1930 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.326 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/a9f0f85e-5027-4f76-b1bd-2cae864dce59 # Target file: checkm_output/bins/pAB198069.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pAB198069.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/a9f0f85e-5027-4f76-b1bd-2cae864dce59 checkm_output/bins/pAB198069.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:35:12 2020 # [ok]