# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 72 IstB_IS21 PF01695.12 178 1e-07 18.9 0.0 1 1 5.3e-08 1.1e-07 18.8 0.0 45 85 31 71 19 72 0.92 # 1 # 216 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.310 1_1 - 72 CbiA PF01656.18 195 6.3e-06 13.0 0.0 1 1 4.1e-06 8.2e-06 12.7 0.0 1 29 35 63 35 64 0.90 # 1 # 216 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.310 1_1 - 72 AAA_29 PF13555.1 62 9.5e-06 12.6 0.0 1 1 6.9e-06 1.4e-05 12.1 0.0 16 37 27 47 21 50 0.83 # 1 # 216 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.310 1_1 - 72 AAA_25 PF13481.1 194 1.2e-08 22.0 0.0 1 1 6.8e-09 1.4e-08 21.7 0.0 30 60 30 61 22 71 0.86 # 1 # 216 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.310 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/8a6797a7-bd63-4948-8ac1-a02db4245aab # Target file: checkm_output/bins/pAAFL01000034.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pAAFL01000034.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/8a6797a7-bd63-4948-8ac1-a02db4245aab checkm_output/bins/pAAFL01000034.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:35:02 2020 # [ok]