# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_3 - 94 AAA_21 PF13304.1 303 0.00028 9.7 10.7 1 1 5.6e-05 0.00033 9.5 10.7 80 162 6 88 2 92 0.93 # 822 # 1103 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.202 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/ba4c9648-5007-4f74-b082-00f3eb53b832 # Target file: checkm_output/bins/pAAFL01000030.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pAAFL01000030.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/ba4c9648-5007-4f74-b082-00f3eb53b832 checkm_output/bins/pAAFL01000030.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:34:59 2020 # [ok]