#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
1_3                  -            371 AAA_21               PF13304.1    303    0.0044    5.3  28.9   1   2     0.027      0.11    0.7  10.0   115   231    64   164    30   198 0.55 # 541 # 1653 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.285
1_3                  -            371 AAA_21               PF13304.1    303    0.0044    5.3  28.9   2   2   6.1e-05   0.00025    9.4  12.3    34   196   189   342   172   362 0.82 # 541 # 1653 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.285
1_2                  -            104 Ribosomal_S2         PF00318.15   211   3.1e-06   14.8   1.6   1   1   9.2e-07   3.7e-06   14.6   1.6   103   160    19    91     7    98 0.77 # 230 # 541 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.282
#
# Program:         hmmsearch
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SEARCH
# Query file:      /tmp/db01867b-3b49-4693-aab5-1df6d086fd63
# Target file:     checkm_output/bins/pAAFJ01000019.1.assembled/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pAAFJ01000019.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/db01867b-3b49-4693-aab5-1df6d086fd63 checkm_output/bins/pAAFJ01000019.1.assembled/genes.faa 
# Current dir:     /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2
# Date:            Tue Jul  7 16:34:46 2020
# [ok]