# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_93 - 330 Mg_chelatase PF01078.16 207 0.00012 14.4 0.0 1 2 0.05 6 -0.9 0.0 40 59 84 103 81 128 0.82 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_93 - 330 Mg_chelatase PF01078.16 207 0.00012 14.4 0.0 2 2 4.8e-06 0.00058 12.2 0.0 7 50 145 188 139 242 0.82 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_45 - 278 Methyltransf_12 PF08242.7 99 3.4e-05 17.5 0.0 1 1 7.9e-07 9.5e-05 16.1 0.0 1 86 66 152 66 157 0.85 # 29936 # 30769 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_45 - 278 UPF0020 PF01170.13 180 5.8e-09 28.9 0.0 1 1 2.1e-10 1.3e-08 27.8 0.0 27 123 60 148 55 154 0.86 # 29936 # 30769 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_44 - 789 UPF0020 PF01170.13 180 1.3e-08 27.8 0.0 1 2 2e-05 0.0012 11.6 0.0 28 58 39 68 35 155 0.77 # 27573 # 29939 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_44 - 789 UPF0020 PF01170.13 180 1.3e-08 27.8 0.0 2 2 7.3e-06 0.00044 13.0 0.0 61 117 288 346 257 352 0.81 # 27573 # 29939 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_22 - 460 cobW PF02492.14 178 0.00039 13.0 0.0 1 1 6.2e-06 0.00075 12.1 0.0 5 33 54 83 51 90 0.86 # 12935 # 14314 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.314 1_5 - 168 Terminase_6 PF03237.10 384 0.00023 13.1 0.1 1 1 3.2e-06 0.00038 12.4 0.1 1 55 4 62 4 107 0.82 # 1496 # 1999 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.317 1_79 - 598 IstB_IS21 PF01695.12 178 2.9e-06 19.9 0.0 1 2 2.2e-06 0.00013 14.5 0.0 45 86 31 72 20 85 0.88 # 58195 # 59988 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.292 1_79 - 598 IstB_IS21 PF01695.12 178 2.9e-06 19.9 0.0 2 2 0.02 1.2 1.7 0.1 97 138 109 158 102 166 0.64 # 58195 # 59988 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.292 1_76 - 238 IstB_IS21 PF01695.12 178 0.00048 12.7 0.0 1 1 3.1e-05 0.0019 10.8 0.0 30 74 11 57 3 90 0.76 # 55084 # 55797 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.294 1_107 - 220 MipZ PF09140.6 261 5.7e-15 48.2 2.3 1 2 2e-12 2.4e-10 33.0 1.2 2 141 3 130 2 158 0.73 # 81818 # 82477 # 1 # ID=1_107;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_107 - 220 MipZ PF09140.6 261 5.7e-15 48.2 2.3 2 2 0.00013 0.016 7.4 0.0 212 257 174 214 145 217 0.89 # 81818 # 82477 # 1 # ID=1_107;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_45 - 278 Methyltransf_18 PF12847.2 112 6.4e-07 23.2 0.0 1 1 1.2e-08 1.4e-06 22.0 0.0 5 78 65 139 60 214 0.65 # 29936 # 30769 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_26 - 488 UvrD_C_2 PF13538.1 104 1.4e-11 37.6 0.0 1 1 3.8e-13 4.5e-11 36.0 0.0 37 103 370 466 333 467 0.71 # 16192 # 17655 # -1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_22 - 460 DUF87 PF01935.12 229 1.5e-07 24.6 0.5 1 1 6.4e-09 3.8e-07 23.3 0.1 12 154 39 205 27 288 0.60 # 12935 # 14314 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.314 1_93 - 330 DUF87 PF01935.12 229 9.7e-05 15.4 0.9 1 1 3.3e-06 0.0002 14.4 0.2 24 45 161 182 138 193 0.83 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_93 - 330 Septin PF00735.13 281 4.6e-05 15.7 0.0 1 1 6.3e-07 7.5e-05 15.0 0.0 5 32 161 188 157 209 0.79 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_93 - 330 AAA_22 PF13401.1 131 2e-06 21.1 0.0 1 1 1.4e-07 4.1e-06 20.2 0.0 7 54 163 221 159 253 0.77 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_22 - 460 AAA_22 PF13401.1 131 2e-05 17.9 0.0 1 1 2.7e-06 8e-05 16.0 0.0 4 68 49 105 46 216 0.68 # 12935 # 14314 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.314 1_64 - 838 AAA_22 PF13401.1 131 0.00015 15.1 0.1 1 2 0.0056 0.17 5.2 0.0 5 27 460 482 456 582 0.85 # 40861 # 43374 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.323 1_64 - 838 AAA_22 PF13401.1 131 0.00015 15.1 0.1 2 2 0.0028 0.085 6.2 0.0 89 121 671 708 632 714 0.71 # 40861 # 43374 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.323 1_109 - 1970 AAA_22 PF13401.1 131 0.0019 11.5 2.1 1 1 0.0012 0.035 7.4 2.1 72 101 1114 1156 974 1200 0.74 # 83095 # 89004 # 1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.308 1_107 - 220 ATP_bind_1 PF03029.12 238 0.00011 14.9 0.1 1 1 6.5e-06 0.00039 13.1 0.0 6 34 12 40 10 52 0.92 # 81818 # 82477 # 1 # ID=1_107;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_93 - 330 ATP_bind_1 PF03029.12 238 0.0002 14.1 0.0 1 1 5.9e-06 0.00036 13.3 0.0 1 22 165 186 165 193 0.86 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_45 - 278 Methyltransf_11 PF08241.7 95 6.2e-12 39.1 0.0 1 2 4.2e-10 5.1e-08 26.5 0.0 1 67 66 138 66 154 0.88 # 29936 # 30769 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_45 - 278 Methyltransf_11 PF08241.7 95 6.2e-12 39.1 0.0 2 2 3e-05 0.0036 11.0 0.0 40 93 155 209 142 211 0.80 # 29936 # 30769 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_106 - 141 RRM_1 PF00076.17 70 1.4e-05 17.9 0.6 1 2 4.4e-07 5.3e-05 16.0 0.1 6 62 7 68 5 70 0.88 # 81267 # 81689 # 1 # ID=1_106;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.329 1_106 - 141 RRM_1 PF00076.17 70 1.4e-05 17.9 0.6 2 2 0.075 9 -0.7 0.0 4 18 104 118 104 132 0.76 # 81267 # 81689 # 1 # ID=1_106;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.329 1_93 - 330 PRK PF00485.13 194 0.0008 12.1 0.0 1 1 1.1e-05 0.0014 11.4 0.0 2 23 163 184 162 222 0.82 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_107 - 220 SRP54 PF00448.17 196 0.00054 12.6 0.0 1 1 8.4e-06 0.001 11.7 0.0 11 72 12 71 9 99 0.73 # 81818 # 82477 # 1 # ID=1_107;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_45 - 278 N6_N4_Mtase PF01555.13 231 6.5e-28 90.9 0.2 1 2 2.3e-18 1.4e-16 53.8 0.0 135 230 11 100 1 101 0.82 # 29936 # 30769 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_45 - 278 N6_N4_Mtase PF01555.13 231 6.5e-28 90.9 0.2 2 2 9.1e-13 5.4e-11 35.5 0.2 1 73 132 238 132 277 0.80 # 29936 # 30769 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_44 - 789 N6_N4_Mtase PF01555.13 231 1.7e-17 56.8 7.2 1 3 1.3e-08 8e-07 21.9 0.0 171 223 20 71 8 76 0.90 # 27573 # 29939 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_44 - 789 N6_N4_Mtase PF01555.13 231 1.7e-17 56.8 7.2 2 3 0.072 4.3 -0.1 0.7 95 116 87 128 81 221 0.60 # 27573 # 29939 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_44 - 789 N6_N4_Mtase PF01555.13 231 1.7e-17 56.8 7.2 3 3 1.7e-12 1e-10 34.6 1.9 1 92 336 449 336 506 0.80 # 27573 # 29939 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_93 - 330 AAA_17 PF13207.1 121 5.2e-05 17.2 0.2 1 1 4.1e-06 0.00025 15.1 0.1 2 43 163 200 162 225 0.72 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_107 - 220 AAA_17 PF13207.1 121 0.00017 15.6 0.3 1 1 7.6e-06 0.00046 14.2 0.3 9 78 12 108 11 197 0.68 # 81818 # 82477 # 1 # ID=1_107;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_93 - 330 AAA_21 PF13304.1 303 6e-05 16.2 3.6 1 3 0.077 9.2 -0.8 0.1 42 82 6 45 2 85 0.61 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_93 - 330 AAA_21 PF13304.1 303 6e-05 16.2 3.6 2 3 0.03 3.6 0.5 0.2 137 180 104 147 90 160 0.44 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_93 - 330 AAA_21 PF13304.1 303 6e-05 16.2 3.6 3 3 8.7e-07 0.0001 15.4 0.0 3 59 164 201 162 282 0.73 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_93 - 330 Miro PF08477.8 119 6.7e-05 16.6 0.1 1 1 3e-06 0.00018 15.2 0.1 2 21 163 182 162 294 0.84 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_22 - 460 Miro PF08477.8 119 0.00057 13.6 0.0 1 1 8.8e-05 0.0053 10.4 0.0 3 25 53 75 51 101 0.82 # 12935 # 14314 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.314 1_93 - 330 MobB PF03205.9 140 6.9e-05 15.7 0.0 1 1 1.1e-06 0.00013 14.8 0.0 3 24 163 184 161 198 0.85 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_109 - 1970 Helicase_C PF00271.26 78 1.6e-10 34.0 0.0 1 1 7.8e-12 9.3e-10 31.5 0.0 9 78 1523 1594 1514 1594 0.87 # 83095 # 89004 # 1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.308 1_107 - 220 ArsA_ATPase PF02374.10 305 4.8e-07 22.2 0.3 1 2 2.2e-08 2.6e-06 19.8 0.0 8 48 9 49 1 72 0.85 # 81818 # 82477 # 1 # ID=1_107;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_107 - 220 ArsA_ATPase PF02374.10 305 4.8e-07 22.2 0.3 2 2 0.029 3.5 -0.3 0.2 142 202 118 161 113 186 0.48 # 81818 # 82477 # 1 # ID=1_107;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_26 - 488 PhoH PF02562.11 205 3.2e-06 19.7 0.0 1 2 0.00019 0.011 8.0 0.0 6 51 4 44 1 62 0.73 # 16192 # 17655 # -1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_26 - 488 PhoH PF02562.11 205 3.2e-06 19.7 0.0 2 2 0.00012 0.0072 8.7 0.0 118 179 191 246 186 266 0.76 # 16192 # 17655 # -1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_76 - 238 PhoH PF02562.11 205 5.6e-06 18.9 0.0 1 1 1.7e-07 1e-05 18.0 0.0 18 52 29 63 12 66 0.86 # 55084 # 55797 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.294 1_93 - 330 T2SE PF00437.15 272 5.8e-63 205.4 0.0 1 1 6.1e-65 7.3e-63 205.1 0.0 7 268 15 311 10 315 0.94 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_22 - 460 Zeta_toxin PF06414.7 201 0.00081 11.7 0.0 1 1 1.4e-05 0.0017 10.6 0.0 20 50 53 85 45 103 0.88 # 12935 # 14314 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.314 1_93 - 330 SMC_N PF02463.14 220 0.00047 12.6 0.1 1 1 7.4e-06 0.00089 11.7 0.1 7 44 146 180 137 207 0.77 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_107 - 220 VirC1 PF07015.6 231 8.1e-06 18.2 0.1 1 2 9.7e-05 0.012 7.8 0.0 1 40 1 40 1 58 0.86 # 81818 # 82477 # 1 # ID=1_107;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_107 - 220 VirC1 PF07015.6 231 8.1e-06 18.2 0.1 2 2 5.1e-05 0.0062 8.8 0.0 87 152 83 149 67 213 0.76 # 81818 # 82477 # 1 # ID=1_107;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_22 - 460 Arch_ATPase PF01637.13 234 8.8e-05 15.4 0.5 1 1 5.4e-06 0.00064 12.6 0.4 23 58 52 87 43 241 0.73 # 12935 # 14314 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.314 1_22 - 460 AAA_16 PF13191.1 185 7.4e-05 15.9 0.0 1 1 6.8e-06 0.00027 14.1 0.0 21 54 46 80 41 104 0.80 # 12935 # 14314 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.314 1_93 - 330 AAA_16 PF13191.1 185 0.00024 14.3 0.0 1 1 9e-06 0.00036 13.7 0.0 23 63 159 204 148 314 0.76 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_64 - 838 AAA_16 PF13191.1 185 0.00073 12.7 0.0 1 1 3.4e-05 0.0014 11.8 0.0 19 149 454 578 442 699 0.76 # 40861 # 43374 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.323 1_93 - 330 AAA_23 PF13476.1 202 4.8e-06 20.1 1.3 1 2 0.076 9.1 -0.3 1.0 97 136 117 138 28 152 0.49 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_93 - 330 AAA_23 PF13476.1 202 4.8e-06 20.1 1.3 2 2 4e-08 4.8e-06 20.1 1.3 5 38 147 179 141 181 0.87 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_93 - 330 AAA_18 PF13238.1 129 0.00014 15.3 0.1 1 1 3.7e-06 0.00045 13.7 0.0 1 18 163 180 163 238 0.78 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_107 - 220 CbiA PF01656.18 195 1.1e-11 37.6 0.1 1 1 4.7e-13 1.9e-11 36.9 0.1 5 189 8 176 4 182 0.72 # 81818 # 82477 # 1 # ID=1_107;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_64 - 838 CbiA PF01656.18 195 0.00013 14.5 0.0 1 1 7.9e-06 0.00031 13.3 0.0 7 88 467 572 464 587 0.57 # 40861 # 43374 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.323 1_79 - 598 CbiA PF01656.18 195 0.00064 12.3 0.5 1 1 0.00026 0.01 8.4 0.5 1 29 35 63 35 136 0.82 # 58195 # 59988 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.292 1_45 - 278 Methyltransf_25 PF13649.1 101 2.1e-07 24.5 0.0 1 1 3.6e-09 4.4e-07 23.4 0.0 1 74 65 138 65 206 0.81 # 29936 # 30769 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_79 - 598 KaiC PF06745.8 227 4.9e-05 15.7 0.1 1 1 2.8e-06 0.00017 13.9 0.0 16 78 30 90 23 214 0.73 # 58195 # 59988 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.292 1_76 - 238 KaiC PF06745.8 227 0.00016 14.0 0.0 1 1 3.2e-06 0.00019 13.7 0.0 16 145 27 164 18 217 0.66 # 55084 # 55797 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.294 1_22 - 460 AAA_14 PF13173.1 128 4.2e-05 16.6 0.2 1 2 7.6e-05 0.0031 10.6 0.0 6 37 53 85 49 214 0.90 # 12935 # 14314 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.314 1_22 - 460 AAA_14 PF13173.1 128 4.2e-05 16.6 0.2 2 2 0.029 1.2 2.3 0.0 64 99 311 344 251 364 0.75 # 12935 # 14314 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.314 1_93 - 330 AAA_14 PF13173.1 128 0.00018 14.6 0.0 1 1 1.1e-05 0.00045 13.3 0.0 3 55 161 212 160 278 0.76 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_107 - 220 AAA_14 PF13173.1 128 0.0012 11.9 6.8 1 1 0.00022 0.0088 9.1 6.8 13 68 13 86 11 217 0.82 # 81818 # 82477 # 1 # ID=1_107;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_93 - 330 GvpD PF07088.6 484 0.00064 11.2 0.0 1 1 6.5e-06 0.00078 10.9 0.0 8 40 158 190 150 257 0.84 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_93 - 330 AAA_29 PF13555.1 62 3.1e-05 16.7 0.0 1 1 6.5e-07 7.8e-05 15.4 0.0 12 41 152 178 139 184 0.74 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_79 - 598 AAA PF00004.24 132 0.0006 13.2 0.1 1 2 6.3e-05 0.0076 9.6 0.0 2 105 37 166 36 178 0.65 # 58195 # 59988 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.292 1_79 - 598 AAA PF00004.24 132 0.0006 13.2 0.1 2 2 0.061 7.3 -0.0 0.0 54 74 416 434 380 456 0.78 # 58195 # 59988 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.292 1_22 - 460 Bac_DnaA PF00308.13 219 0.00049 12.9 0.0 1 1 1e-05 0.0012 11.7 0.0 30 57 45 72 39 83 0.82 # 12935 # 14314 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.314 1_5 - 168 TK PF00265.13 176 4.6e-22 71.6 1.3 1 1 8.9e-24 1.1e-21 70.4 1.3 3 176 2 162 1 162 0.80 # 1496 # 1999 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.317 1_26 - 488 UvrD_C PF13361.1 351 1.1e-13 44.5 1.2 1 2 0.00051 0.061 5.9 0.2 2 44 252 295 251 316 0.73 # 16192 # 17655 # -1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_26 - 488 UvrD_C PF13361.1 351 1.1e-13 44.5 1.2 2 2 9e-16 1.1e-13 44.5 1.2 236 347 352 467 328 469 0.71 # 16192 # 17655 # -1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_93 - 330 Sigma54_activat PF00158.21 168 0.00059 12.5 0.0 1 1 1.2e-05 0.0015 11.2 0.0 12 43 150 181 142 200 0.81 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_45 - 278 N6_Mtase PF02384.11 311 4.9e-05 15.7 0.0 1 1 6.5e-07 7.8e-05 15.0 0.0 36 136 53 142 45 168 0.80 # 29936 # 30769 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_93 - 330 DUF258 PF03193.11 161 0.00086 11.7 0.0 1 1 9.4e-06 0.0011 11.3 0.0 22 57 146 182 125 262 0.83 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_95 - 607 TraG-D_C PF12696.2 128 1.2e-29 96.0 0.0 1 1 6e-31 2.4e-29 95.0 0.0 2 127 414 535 413 536 0.87 # 72090 # 73910 # 1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 460 TraG-D_C PF12696.2 128 1.8e-13 43.7 0.3 1 1 9.3e-15 3.7e-13 42.6 0.3 3 85 311 392 309 422 0.84 # 12935 # 14314 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.314 1_64 - 838 TraG-D_C PF12696.2 128 2e-06 20.9 0.1 1 1 1.9e-07 7.6e-06 19.0 0.1 3 123 672 788 670 790 0.63 # 40861 # 43374 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.323 1_107 - 220 AAA_31 PF13614.1 157 1.9e-08 27.6 0.7 1 3 2.5e-06 0.00029 13.9 0.0 2 42 3 43 2 50 0.90 # 81818 # 82477 # 1 # ID=1_107;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_107 - 220 AAA_31 PF13614.1 157 1.9e-08 27.6 0.7 2 3 0.00015 0.018 8.2 0.1 106 153 66 114 58 118 0.80 # 81818 # 82477 # 1 # ID=1_107;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_107 - 220 AAA_31 PF13614.1 157 1.9e-08 27.6 0.7 3 3 0.012 1.5 1.9 0.1 106 134 139 170 126 178 0.78 # 81818 # 82477 # 1 # ID=1_107;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_93 - 330 AAA_33 PF13671.1 143 0.00077 12.5 0.0 1 1 1e-05 0.0012 11.9 0.0 2 20 163 181 163 261 0.85 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_79 - 598 DnaB_C PF03796.10 259 2.3e-05 16.5 0.0 1 2 1.5e-06 9e-05 14.6 0.0 13 112 27 131 19 157 0.79 # 58195 # 59988 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.292 1_79 - 598 DnaB_C PF03796.10 259 2.3e-05 16.5 0.0 2 2 0.017 1 1.2 0.0 124 185 115 177 98 180 0.71 # 58195 # 59988 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.292 1_76 - 238 DnaB_C PF03796.10 259 0.00038 12.5 0.1 1 1 1.3e-05 0.0008 11.5 0.1 18 108 29 115 16 120 0.67 # 55084 # 55797 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.294 1_45 - 278 Methyltransf_26 PF13659.1 117 2.2e-18 59.6 0.0 1 1 8.2e-20 3.3e-18 59.0 0.0 3 102 64 193 62 215 0.75 # 29936 # 30769 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_109 - 1970 Methyltransf_26 PF13659.1 117 6.5e-15 48.4 0.0 1 1 1.7e-15 6.6e-14 45.1 0.0 3 116 224 331 222 332 0.84 # 83095 # 89004 # 1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.308 1_44 - 789 Methyltransf_26 PF13659.1 117 4.8e-11 35.9 0.0 1 1 4.7e-12 1.9e-10 34.0 0.0 2 116 41 415 40 416 0.74 # 27573 # 29939 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_26 - 488 AAA_30 PF13604.1 196 2.5e-07 23.6 0.0 1 2 1.2e-07 1.5e-05 17.8 0.0 2 79 3 79 2 95 0.76 # 16192 # 17655 # -1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_26 - 488 AAA_30 PF13604.1 196 2.5e-07 23.6 0.0 2 2 0.003 0.36 3.5 0.0 98 133 197 228 169 275 0.72 # 16192 # 17655 # -1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_106 - 141 RRM_6 PF14259.1 70 0.0009 12.4 0.1 1 1 2.1e-05 0.0025 11.0 0.0 6 60 7 66 5 71 0.84 # 81267 # 81689 # 1 # ID=1_106;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.329 1_93 - 330 FtsK_SpoIIIE PF01580.13 205 5.2e-07 22.5 0.0 1 1 1.8e-08 1.1e-06 21.4 0.0 30 59 148 181 127 183 0.79 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_22 - 460 FtsK_SpoIIIE PF01580.13 205 4.7e-05 16.1 0.0 1 1 1.5e-06 8.8e-05 15.2 0.0 39 86 47 92 12 106 0.80 # 12935 # 14314 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.314 1_45 - 278 MTS PF05175.9 170 8.5e-08 24.9 0.0 1 1 2.1e-09 1.2e-07 24.4 0.0 23 166 54 208 46 212 0.76 # 29936 # 30769 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_109 - 1970 MTS PF05175.9 170 1.3e-05 17.8 0.0 1 1 8.6e-07 5.2e-05 15.8 0.0 83 140 266 330 216 343 0.67 # 83095 # 89004 # 1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.308 1_93 - 330 Dynamin_N PF00350.18 168 0.00038 13.5 0.0 1 2 0.038 4.6 0.2 0.0 31 107 94 115 22 155 0.60 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_93 - 330 Dynamin_N PF00350.18 168 0.00038 13.5 0.0 2 2 2.1e-05 0.0025 10.8 0.0 1 32 163 192 163 220 0.88 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_70 - 251 RecA PF00154.16 323 6.1e-05 15.3 0.1 1 1 8.6e-07 0.0001 14.6 0.1 279 313 22 56 11 66 0.89 # 49088 # 49840 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.275 1_50 - 144 UPF0146 PF03686.8 127 0.00015 14.7 0.0 1 1 2e-06 0.00024 14.1 0.0 30 73 50 96 45 99 0.83 # 32826 # 33257 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.312 1_93 - 330 ABC_tran PF00005.22 137 8.3e-07 22.5 0.0 1 1 3.2e-08 1.9e-06 21.4 0.0 8 51 157 201 150 229 0.84 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_22 - 460 ABC_tran PF00005.22 137 0.00023 14.7 0.1 1 1 1.1e-05 0.00066 13.2 0.1 15 80 53 171 47 350 0.76 # 12935 # 14314 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.314 1_45 - 278 Cons_hypoth95 PF03602.10 183 3.6e-05 16.4 0.0 1 1 1.1e-06 6.6e-05 15.5 0.0 42 127 61 144 52 163 0.75 # 29936 # 30769 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_44 - 789 Cons_hypoth95 PF03602.10 183 3.7e-05 16.3 0.0 1 2 0.00011 0.0064 9.0 0.0 34 77 28 73 19 105 0.80 # 27573 # 29939 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_44 - 789 Cons_hypoth95 PF03602.10 183 3.7e-05 16.3 0.0 2 2 0.003 0.18 4.3 0.0 106 125 327 346 288 354 0.71 # 27573 # 29939 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_109 - 1970 Eco57I PF07669.6 106 1.3e-10 34.8 0.6 1 1 3.8e-11 4.6e-09 29.8 0.1 2 103 281 381 280 384 0.73 # 83095 # 89004 # 1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.308 1_26 - 488 AAA_19 PF13245.1 76 2.8e-06 20.2 0.0 1 1 4.9e-08 5.9e-06 19.2 0.0 11 75 17 76 9 77 0.89 # 16192 # 17655 # -1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_26 - 488 Helicase_RecD PF05127.9 177 0.00034 13.5 0.5 1 2 0.006 0.72 2.6 0.0 2 46 21 65 20 94 0.67 # 16192 # 17655 # -1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_26 - 488 Helicase_RecD PF05127.9 177 0.00034 13.5 0.5 2 2 0.00013 0.015 8.1 0.0 77 156 179 255 132 266 0.73 # 16192 # 17655 # -1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_64 - 838 AAA_10 PF12846.2 304 1.6e-54 178.5 1.5 1 1 1.1e-55 2.5e-54 177.9 0.5 1 303 459 761 459 762 0.93 # 40861 # 43374 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.323 1_83 - 924 AAA_10 PF12846.2 304 5.7e-34 111.0 0.2 1 1 4.1e-35 9.9e-34 110.2 0.2 2 299 546 841 545 845 0.81 # 61575 # 64346 # 1 # ID=1_83;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.308 1_22 - 460 AAA_10 PF12846.2 304 1.7e-21 70.0 0.4 1 1 1.4e-22 3.3e-21 69.1 0.4 3 298 51 385 50 391 0.62 # 12935 # 14314 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.314 1_93 - 330 AAA_10 PF12846.2 304 1.6e-05 17.6 0.0 1 1 9.8e-07 2.4e-05 17.0 0.0 2 23 161 182 160 221 0.88 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_95 - 607 AAA_10 PF12846.2 304 8.2e-05 15.3 0.0 1 1 7.4e-06 0.00018 14.2 0.0 33 301 161 497 133 500 0.67 # 72090 # 73910 # 1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.331 1_26 - 488 AAA_12 PF13087.1 200 0.001 11.6 1.2 1 1 6.9e-05 0.0083 8.6 1.2 8 194 241 465 236 467 0.54 # 16192 # 17655 # -1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_109 - 1970 ResIII PF04851.10 184 2.1e-09 30.6 5.1 1 1 6.9e-11 2.1e-09 30.6 5.1 3 182 959 1198 957 1200 0.59 # 83095 # 89004 # 1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.308 1_26 - 488 ResIII PF04851.10 184 4.2e-05 16.6 3.1 1 2 8.7e-06 0.00026 14.0 0.0 27 80 18 72 3 97 0.79 # 16192 # 17655 # -1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_26 - 488 ResIII PF04851.10 184 4.2e-05 16.6 3.1 2 2 0.076 2.3 1.2 0.0 137 155 170 201 101 206 0.70 # 16192 # 17655 # -1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_93 - 330 ResIII PF04851.10 184 0.00013 15.0 0.2 1 1 9e-06 0.00027 14.0 0.1 5 47 142 182 137 226 0.82 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_64 - 838 ResIII PF04851.10 184 0.0037 10.2 9.2 1 1 2.1e-05 0.00064 12.7 0.8 23 162 457 685 416 709 0.65 # 40861 # 43374 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.323 1_45 - 278 Methyltransf_31 PF13847.1 152 2e-11 36.9 0.1 1 1 5.6e-13 3.3e-11 36.1 0.2 2 106 60 209 59 251 0.81 # 29936 # 30769 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_44 - 789 Methyltransf_31 PF13847.1 152 0.00024 13.9 0.2 1 2 4.1e-06 0.00024 13.9 0.2 39 122 301 420 293 482 0.78 # 27573 # 29939 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_44 - 789 Methyltransf_31 PF13847.1 152 0.00024 13.9 0.2 2 2 0.065 3.9 0.2 0.2 49 117 648 725 637 765 0.66 # 27573 # 29939 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_64 - 838 Zot PF05707.7 193 4.2e-05 16.2 0.0 1 1 1e-06 0.00012 14.7 0.0 83 129 673 716 656 748 0.85 # 40861 # 43374 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.323 1_26 - 488 Viral_helicase1 PF01443.13 234 4.1e-13 42.5 0.3 1 3 0.0002 0.024 7.3 0.0 2 55 20 75 19 82 0.72 # 16192 # 17655 # -1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_26 - 488 Viral_helicase1 PF01443.13 234 4.1e-13 42.5 0.3 2 3 1.6e-09 1.9e-07 23.9 0.1 44 198 175 330 133 332 0.73 # 16192 # 17655 # -1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_26 - 488 Viral_helicase1 PF01443.13 234 4.1e-13 42.5 0.3 3 3 0.00015 0.018 7.6 0.0 186 230 409 464 356 467 0.76 # 16192 # 17655 # -1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_25 - 87 APG12 PF04110.8 87 0.00072 12.9 0.0 1 1 7.6e-06 0.00091 12.6 0.0 34 78 24 68 8 72 0.82 # 15925 # 16185 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.349 1_109 - 1970 DEAD PF00270.24 169 4.7e-07 22.6 1.5 1 1 5.9e-08 3.6e-06 19.7 0.7 7 163 968 1199 961 1206 0.70 # 83095 # 89004 # 1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.308 1_93 - 330 DEAD PF00270.24 169 0.00013 14.7 0.0 1 1 3.6e-06 0.00022 13.9 0.0 13 36 159 181 144 243 0.69 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_93 - 330 DUF815 PF05673.8 250 0.00018 13.6 0.0 1 1 2.3e-06 0.00027 13.0 0.0 10 75 115 182 107 208 0.79 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_45 - 278 PrmA PF06325.8 295 0.00093 11.5 0.0 1 1 1.2e-05 0.0014 10.9 0.0 158 231 58 137 48 154 0.76 # 29936 # 30769 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_22 - 460 DUF853 PF05872.7 504 2.4e-05 15.9 0.0 1 1 4.3e-07 5.1e-05 14.9 0.0 12 66 40 94 28 124 0.77 # 12935 # 14314 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.314 1_95 - 607 TrwB_AAD_bind PF10412.4 386 6.2e-22 70.8 0.0 1 2 2.8e-06 8.5e-05 14.4 0.0 44 122 158 248 131 271 0.73 # 72090 # 73910 # 1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.331 1_95 - 607 TrwB_AAD_bind PF10412.4 386 6.2e-22 70.8 0.0 2 2 2e-18 5.9e-17 54.4 0.0 165 379 329 548 307 551 0.82 # 72090 # 73910 # 1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 460 TrwB_AAD_bind PF10412.4 386 4.8e-21 67.9 0.0 1 1 4.7e-22 1.4e-20 66.4 0.0 10 371 44 426 38 435 0.75 # 12935 # 14314 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.314 1_64 - 838 TrwB_AAD_bind PF10412.4 386 6.7e-14 44.4 0.0 1 2 1.6e-09 4.8e-08 25.1 0.0 2 124 446 574 445 605 0.72 # 40861 # 43374 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.323 1_64 - 838 TrwB_AAD_bind PF10412.4 386 6.7e-14 44.4 0.0 2 2 5e-07 1.5e-05 16.9 0.0 221 286 648 717 639 798 0.71 # 40861 # 43374 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.323 1_93 - 330 TrwB_AAD_bind PF10412.4 386 0.0002 13.2 0.0 1 1 1.1e-05 0.00032 12.5 0.0 16 40 161 185 154 213 0.86 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_26 - 488 AAA_11 PF13086.1 236 6.9e-05 15.6 0.5 1 3 0.0017 0.2 4.3 0.0 17 47 16 51 4 96 0.69 # 16192 # 17655 # -1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_26 - 488 AAA_11 PF13086.1 236 6.9e-05 15.6 0.5 2 3 8.5e-05 0.01 8.5 0.0 185 228 185 227 170 227 0.90 # 16192 # 17655 # -1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_26 - 488 AAA_11 PF13086.1 236 6.9e-05 15.6 0.5 3 3 0.09 11 -1.4 0.1 100 133 364 397 267 449 0.58 # 16192 # 17655 # -1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_95 - 607 T4SS-DNA_transf PF02534.9 469 8.8e-112 367.1 0.0 1 1 2e-113 1.2e-111 366.7 0.0 2 461 93 572 82 578 0.86 # 72090 # 73910 # 1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 460 T4SS-DNA_transf PF02534.9 469 1.3e-17 56.6 0.5 1 1 3e-19 1.8e-17 56.1 0.5 40 384 33 387 7 405 0.81 # 12935 # 14314 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.314 1_22 - 460 ArgK PF03308.11 267 0.00028 12.8 0.0 1 1 5.3e-06 0.00064 11.7 0.0 33 67 53 85 30 90 0.82 # 12935 # 14314 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.314 1_93 - 330 Pox_A32 PF04665.7 241 5.2e-05 15.8 0.2 1 1 8.5e-07 0.0001 14.8 0.1 15 36 162 183 148 213 0.86 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_45 - 278 Methyltransf_23 PF13489.1 161 0.00021 14.2 0.0 1 1 1.8e-05 0.0011 11.9 0.0 11 67 53 109 40 203 0.72 # 29936 # 30769 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_109 - 1970 Methyltransf_23 PF13489.1 161 0.00044 13.2 0.1 1 1 3.4e-05 0.0021 11.0 0.0 23 84 222 287 194 350 0.83 # 83095 # 89004 # 1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.308 1_93 - 330 RNA_helicase PF00910.17 107 8.1e-05 16.0 0.0 1 1 2.4e-06 0.00029 14.2 0.0 1 21 163 183 163 223 0.85 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_93 - 330 UPF0079 PF02367.12 123 1.1e-05 18.3 0.0 1 1 1.6e-07 1.9e-05 17.5 0.0 6 45 151 190 146 206 0.87 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_36 - 149 LepA_C PF06421.7 108 0.00054 13.0 0.1 1 1 8.4e-06 0.001 12.2 0.1 40 89 87 136 69 143 0.88 # 23946 # 24392 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.293 1_107 - 220 AAA_24 PF13479.1 213 0.00044 13.0 0.1 1 1 9.1e-06 0.0011 11.7 0.1 12 77 11 88 9 92 0.75 # 81818 # 82477 # 1 # ID=1_107;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_26 - 488 UvrD-helicase PF00580.16 315 4.5e-14 45.5 17.8 1 2 1.5e-06 0.00017 14.1 0.2 1 33 3 36 3 125 0.77 # 16192 # 17655 # -1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_26 - 488 UvrD-helicase PF00580.16 315 4.5e-14 45.5 17.8 2 2 4.7e-14 5.6e-12 38.7 1.7 246 311 182 244 129 250 0.72 # 16192 # 17655 # -1 # ID=1_26;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.294 1_93 - 330 NACHT PF05729.7 166 8.2e-05 15.5 0.0 1 1 2.4e-06 0.00014 14.7 0.0 3 22 163 182 161 185 0.91 # 70370 # 71359 # 1 # ID=1_93;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_76 - 238 NACHT PF05729.7 166 0.00032 13.6 0.0 1 1 1.2e-05 0.00072 12.4 0.0 9 95 39 146 32 184 0.64 # 55084 # 55797 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.294 1_76 - 238 AAA_25 PF13481.1 194 1.3e-22 73.3 0.0 1 1 2.7e-24 1.6e-22 73.0 0.0 31 193 28 183 12 184 0.84 # 55084 # 55797 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.294 1_79 - 598 AAA_25 PF13481.1 194 1.8e-22 72.8 0.0 1 1 5.6e-24 3.4e-22 71.9 0.0 30 193 30 175 27 176 0.90 # 58195 # 59988 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.292 1_45 - 278 Methyltransf_15 PF09445.5 164 5.2e-07 22.5 0.1 1 1 1.4e-08 1.6e-06 20.9 0.0 2 80 63 141 62 144 0.90 # 29936 # 30769 # 1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294 1_109 - 1970 SNF2_N PF00176.18 299 3.7e-19 61.7 0.2 1 1 1.2e-20 1.4e-18 59.8 0.2 26 204 975 1235 953 1297 0.79 # 83095 # 89004 # 1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.308 1_114 - 152 ABC_tran_2 PF12848.2 85 0.00015 14.8 3.9 1 1 2e-06 0.00024 14.1 3.9 23 58 109 144 94 151 0.80 # 91131 # 91586 # 1 # ID=1_114;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.285 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/242862e3-e3ca-4817-a929-5eec4aa7aabc # Target file: checkm_output/bins/pAAFJ01000010.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pAAFJ01000010.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/242862e3-e3ca-4817-a929-5eec4aa7aabc checkm_output/bins/pAAFJ01000010.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/combined/rfplasmid_combined_jellynew2 # Date: Tue Jul 7 16:34:46 2020 # [ok]