# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 3_2 - 147 RepL PF05732.6 165 1.2e-66 214.7 4.4 1 1 3.2e-68 1.4e-66 214.5 4.4 13 148 1 136 1 144 0.97 # 1879 # 2319 # -1 # ID=3_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.324 1_27 - 797 TIGR00963 TIGR00963 787 3e-207 681.8 29.1 1 2 3.3e-176 1.4e-174 573.7 4.4 1 473 24 500 24 502 0.97 # 30539 # 32929 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.306 1_27 - 797 TIGR00963 TIGR00963 787 3e-207 681.8 29.1 2 2 1.8e-37 7.7e-36 114.9 16.6 511 784 501 767 500 771 0.78 # 30539 # 32929 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.306 1_1 - 264 ArsA_ATPase PF02374.10 305 4.4e-11 34.0 0.3 1 1 2.4e-12 1.1e-10 32.8 0.3 3 137 3 134 1 137 0.70 # 570 # 1361 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 1_1 - 264 AAA_18 PF13238.1 129 0.00012 14.2 0.0 1 1 8.9e-06 0.00039 12.5 0.0 8 103 12 134 11 138 0.71 # 570 # 1361 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 1_21 - 848 AAA_13 PF13166.1 712 9.5e-39 125.0 59.5 1 2 2.2e-40 9.5e-39 125.0 59.5 9 602 90 701 83 735 0.74 # 22944 # 25487 # -1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.267 1_21 - 848 AAA_13 PF13166.1 712 9.5e-39 125.0 59.5 2 2 0.022 0.95 -0.6 2.1 359 452 756 844 694 847 0.47 # 22944 # 25487 # -1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.267 3_1 - 245 Methyltransf_11 PF08241.7 95 2.5e-06 19.7 0.0 1 1 1.1e-07 4.8e-06 18.8 0.0 2 60 36 94 35 99 0.91 # 437 # 1171 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.256 1_17 - 1025 tRNA-synt_1 PF00133.17 601 1.2e-242 797.9 4.6 1 1 4.6e-244 2e-242 797.1 4.6 2 601 12 625 11 625 0.99 # 14838 # 17912 # 1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_33 - 75 DUF1836 PF08876.6 105 3.8e-05 15.2 11.8 1 3 0.00013 0.0058 8.2 1.1 62 87 3 28 1 32 0.76 # 40881 # 41105 # -1 # ID=1_33;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.373 1_33 - 75 DUF1836 PF08876.6 105 3.8e-05 15.2 11.8 2 3 0.00012 0.0051 8.4 2.0 60 87 28 55 25 59 0.75 # 40881 # 41105 # -1 # ID=1_33;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.373 1_33 - 75 DUF1836 PF08876.6 105 3.8e-05 15.2 11.8 3 3 0.00011 0.0047 8.5 3.1 64 88 41 65 35 74 0.49 # 40881 # 41105 # -1 # ID=1_33;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.373 1_11 - 102 GST_N_3 PF13417.1 75 1.5e-05 17.0 0.0 1 1 4.4e-07 1.9e-05 16.6 0.0 1 51 19 70 19 78 0.91 # 9785 # 10090 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.255 1_1 - 264 YhjQ PF06564.7 244 2.7e-12 38.2 0.0 1 1 8.3e-14 3.6e-12 37.8 0.0 1 152 1 159 1 165 0.85 # 570 # 1361 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 3_2 - 147 HTH_Crp_2 PF13545.1 76 8.1e-07 20.6 0.2 1 1 2.9e-08 1.3e-06 20.0 0.2 30 67 66 103 48 110 0.88 # 1879 # 2319 # -1 # ID=3_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.324 3_1 - 245 Methyltransf_4 PF02390.12 197 7.6e-06 16.8 0.3 1 2 1.7e-07 7.6e-06 16.8 0.3 20 97 31 101 4 104 0.77 # 437 # 1171 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.256 3_1 - 245 Methyltransf_4 PF02390.12 197 7.6e-06 16.8 0.3 2 2 0.093 4.1 -1.9 0.1 136 159 187 207 168 229 0.62 # 437 # 1171 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.256 1_17 - 1025 tRNA-synt_1e PF01406.14 301 8.1e-08 23.4 0.0 1 2 0.019 0.85 0.3 0.0 9 48 34 73 27 75 0.83 # 14838 # 17912 # 1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_17 - 1025 tRNA-synt_1e PF01406.14 301 8.1e-08 23.4 0.0 2 2 2.7e-08 1.2e-06 19.5 0.0 242 299 573 632 556 634 0.75 # 14838 # 17912 # 1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_21 - 848 TIGR00611 TIGR00611 365 1.5e-08 25.6 4.8 1 2 3e-05 0.0013 9.3 0.1 16 46 90 123 87 127 0.88 # 22944 # 25487 # -1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.267 1_21 - 848 TIGR00611 TIGR00611 365 1.5e-08 25.6 4.8 2 2 1.1e-07 5e-06 17.2 0.3 264 339 597 670 473 693 0.71 # 22944 # 25487 # -1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.267 3_1 - 245 Methyltransf_31 PF13847.1 152 7.6e-06 17.3 2.8 1 1 2.9e-07 1.3e-05 16.6 2.6 2 76 29 98 28 225 0.74 # 437 # 1171 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.256 3_2 - 147 FUR PF01475.14 120 2.3e-05 16.1 0.1 1 2 0.015 0.65 1.7 0.0 80 103 2 25 1 38 0.71 # 1879 # 2319 # -1 # ID=3_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.324 3_2 - 147 FUR PF01475.14 120 2.3e-05 16.1 0.1 2 2 7.7e-06 0.00034 12.3 0.1 11 60 46 96 41 99 0.77 # 1879 # 2319 # -1 # ID=3_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.324 1_21 - 848 AAA_23 PF13476.1 202 1.7e-06 20.2 20.0 1 1 3.9e-08 1.7e-06 20.2 20.0 9 197 86 305 71 345 0.53 # 22944 # 25487 # -1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.267 1_22 - 203 HTH_22 PF13309.1 64 2.2e-06 19.2 2.0 1 2 0.00089 0.039 5.6 0.2 3 41 109 147 107 149 0.93 # 25699 # 26307 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.328 1_22 - 203 HTH_22 PF13309.1 64 2.2e-06 19.2 2.0 2 2 8.9e-06 0.00039 12.0 0.0 44 61 177 194 172 195 0.94 # 25699 # 26307 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.328 1_9 - 796 Ribosomal_S13 PF00416.17 107 0.00088 11.5 3.7 1 2 0.0031 0.14 4.5 0.2 11 55 89 135 79 162 0.72 # 6963 # 9350 # -1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 1_9 - 796 Ribosomal_S13 PF00416.17 107 0.00088 11.5 3.7 2 2 0.00046 0.02 7.2 0.5 5 60 627 681 623 708 0.85 # 6963 # 9350 # -1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 1_15 - 225 MULE PF10551.4 93 8e-05 14.6 0.0 1 1 8.3e-06 0.00018 13.4 0.0 19 77 92 147 63 161 0.83 # 13762 # 14436 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_24 - 225 MULE PF10551.4 93 0.00027 12.9 0.0 1 1 2.7e-05 0.0006 11.8 0.0 19 77 92 147 63 161 0.83 # 26937 # 27611 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_15 - 225 HEM4 PF02602.10 231 0.0002 12.3 0.0 1 1 1.6e-05 0.00035 11.6 0.0 125 154 24 53 9 70 0.79 # 13762 # 14436 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_24 - 225 HEM4 PF02602.10 231 0.0002 12.3 0.0 1 1 1.6e-05 0.00035 11.6 0.0 125 154 24 53 8 70 0.79 # 26937 # 27611 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_26 - 504 Glycos_transf_1 PF00534.15 172 2.5e-23 74.1 0.3 1 1 1.9e-24 8.3e-23 72.4 0.2 18 155 323 458 312 475 0.93 # 29009 # 30520 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.301 1_17 - 1025 tRNA-synt_1_2 PF13603.1 185 5.9e-05 14.1 0.0 1 1 4.4e-06 0.00019 12.5 0.0 103 144 297 338 199 368 0.71 # 14838 # 17912 # 1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.288 2_1 - 335 HTH_36 PF13730.1 55 4.9e-07 21.6 1.0 1 1 6.5e-08 1.4e-06 20.1 1.0 2 55 24 74 23 74 0.88 # 1 # 1005 # 1 # ID=2_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.264 3_2 - 147 HTH_36 PF13730.1 55 0.00021 13.2 0.0 1 1 1.7e-05 0.00038 12.4 0.0 26 54 65 93 48 94 0.84 # 1879 # 2319 # -1 # ID=3_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.324 1_9 - 796 Hydrolase PF00702.21 215 2.8e-58 189.6 6.5 1 1 1.1e-59 5e-58 188.7 6.5 1 215 490 702 490 702 0.95 # 6963 # 9350 # -1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 1_31 - 398 TIGR00967 TIGR00967 414 9e-40 128.1 30.9 1 1 3e-41 1.3e-39 127.6 30.9 2 409 12 385 11 390 0.81 # 36566 # 37759 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_27 - 797 Helicase_C PF00271.26 78 2.5e-05 15.9 0.0 1 1 1.9e-06 8.2e-05 14.2 0.0 34 78 482 534 430 534 0.86 # 30539 # 32929 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.306 1_6 - 176 Acetyltransf_4 PF13420.1 155 5.4e-21 66.9 0.6 1 1 1.5e-22 6.6e-21 66.6 0.6 4 152 7 163 5 165 0.85 # 5280 # 5807 # -1 # ID=1_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.265 1_17 - 1025 PhnA_Zn_Ribbon PF08274.7 30 0.00017 13.1 2.6 1 2 0.00027 0.012 7.2 0.4 19 29 451 461 450 462 0.90 # 14838 # 17912 # 1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_17 - 1025 PhnA_Zn_Ribbon PF08274.7 30 0.00017 13.1 2.6 2 2 0.0012 0.055 5.1 0.1 13 26 486 499 484 500 0.88 # 14838 # 17912 # 1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_1 - 264 AAA_31 PF13614.1 157 1.7e-16 52.3 0.4 1 1 1e-17 4.5e-16 50.9 0.4 2 150 3 156 2 163 0.81 # 570 # 1361 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 3_1 - 245 RrnaAD PF00398.15 262 1.8e-75 245.0 4.4 1 1 4.6e-77 2e-75 244.9 4.4 1 262 1 244 1 244 0.97 # 437 # 1171 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.256 3_1 - 245 MTS PF05175.9 170 1.4e-05 16.3 0.0 1 1 4.8e-07 2.1e-05 15.7 0.0 25 113 24 109 14 125 0.83 # 437 # 1171 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.256 1_24 - 225 AAA_17 PF13207.1 121 1.7e-06 20.6 1.0 1 1 1.7e-07 2.5e-06 20.1 1.0 23 113 24 122 20 206 0.85 # 26937 # 27611 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_15 - 225 AAA_17 PF13207.1 121 2.3e-06 20.2 1.3 1 1 2.2e-07 3.2e-06 19.7 1.3 23 113 24 122 20 205 0.85 # 13762 # 14436 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_1 - 264 AAA_17 PF13207.1 121 0.00029 13.4 0.4 1 1 6.6e-05 0.00096 11.8 0.1 9 64 12 71 10 149 0.52 # 570 # 1361 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 1_17 - 1025 tRNA-synt_1g PF09334.6 391 1e-25 81.9 7.9 1 4 3.1e-12 1.4e-10 32.1 0.2 10 135 44 188 41 199 0.75 # 14838 # 17912 # 1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_17 - 1025 tRNA-synt_1g PF09334.6 391 1e-25 81.9 7.9 2 4 0.03 1.3 -0.8 0.0 47 118 303 374 299 379 0.90 # 14838 # 17912 # 1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_17 - 1025 tRNA-synt_1g PF09334.6 391 1e-25 81.9 7.9 3 4 2.1e-05 0.00091 9.6 0.2 164 238 377 450 364 461 0.80 # 14838 # 17912 # 1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_17 - 1025 tRNA-synt_1g PF09334.6 391 1e-25 81.9 7.9 4 4 1e-14 4.4e-13 40.3 0.3 244 387 508 644 497 646 0.75 # 14838 # 17912 # 1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.288 3_1 - 245 DOT1 PF08123.8 205 1.4e-05 16.2 1.3 1 2 1.9e-06 8.2e-05 13.7 0.0 29 91 17 77 13 116 0.83 # 437 # 1171 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.256 3_1 - 245 DOT1 PF08123.8 205 1.4e-05 16.2 1.3 2 2 0.016 0.68 0.9 0.6 78 133 180 229 169 236 0.57 # 437 # 1171 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.256 1_13 - 570 DDE_Tnp_1_6 PF13751.1 125 2.3e-32 103.4 0.7 1 2 0.054 1.2 0.9 1.5 39 71 217 248 207 281 0.68 # 11362 # 13071 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.289 1_13 - 570 DDE_Tnp_1_6 PF13751.1 125 2.3e-32 103.4 0.7 2 2 1e-33 2.3e-32 103.4 0.7 1 124 392 518 392 519 0.94 # 11362 # 13071 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.289 2_5 - 169 DDE_Tnp_1_6 PF13751.1 125 7.2e-11 34.0 1.8 1 1 4.6e-12 1e-10 33.5 1.8 1 74 78 153 78 162 0.82 # 2205 # 2711 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.272 1_17 - 1025 tRNA-synt_1f PF01921.13 360 8.1e-09 26.3 0.0 1 2 0.013 0.58 0.4 0.0 8 59 18 70 14 82 0.79 # 14838 # 17912 # 1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_17 - 1025 tRNA-synt_1f PF01921.13 360 8.1e-09 26.3 0.0 2 2 2.2e-09 9.6e-08 22.7 0.0 273 335 576 638 539 668 0.72 # 14838 # 17912 # 1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_11 - 102 ArsC PF03960.10 110 2.7e-05 16.0 0.4 1 1 1e-06 4.6e-05 15.3 0.3 1 41 20 60 20 65 0.90 # 9785 # 10090 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.255 1_31 - 398 FUSC PF04632.7 650 0.00034 10.8 2.1 1 1 1.3e-05 0.00057 10.1 2.1 405 488 118 200 94 220 0.78 # 36566 # 37759 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.267 1_22 - 203 HTH_29 PF13551.1 112 2.6e-06 19.3 0.1 1 1 3.1e-07 1.3e-05 17.1 0.0 4 34 168 197 166 200 0.91 # 25699 # 26307 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.328 3_2 - 147 MarR PF01047.17 59 6e-05 14.5 0.3 1 1 2.3e-06 0.0001 13.8 0.3 19 50 66 97 52 99 0.86 # 1879 # 2319 # -1 # ID=3_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.324 3_1 - 245 Methyltransf_12 PF08242.7 99 0.00032 13.0 0.2 1 1 1.9e-05 0.00086 11.6 0.0 2 56 36 88 35 114 0.83 # 437 # 1171 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.256 3_2 - 147 HTH_20 PF12840.2 61 2.8e-05 15.7 0.0 1 1 1e-06 4.4e-05 15.0 0.0 25 56 65 96 52 99 0.93 # 1879 # 2319 # -1 # ID=3_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.324 1_6 - 176 Acetyltransf_3 PF13302.1 142 4.7e-19 60.7 0.0 1 1 1.3e-20 5.6e-19 60.5 0.0 6 141 6 145 2 146 0.88 # 5280 # 5807 # -1 # ID=1_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.265 1_6 - 176 FR47 PF08445.5 86 2.9e-07 22.0 0.0 1 1 1.1e-08 5e-07 21.2 0.0 23 80 88 148 74 154 0.84 # 5280 # 5807 # -1 # ID=1_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.265 3_2 - 147 HTH_24 PF13412.1 48 1.1e-07 23.0 1.5 1 2 0.0052 0.23 2.7 0.0 5 21 45 61 43 65 0.89 # 1879 # 2319 # -1 # ID=3_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.324 3_2 - 147 HTH_24 PF13412.1 48 1.1e-07 23.0 1.5 2 2 3.6e-08 1.6e-06 19.2 0.4 18 48 65 95 64 95 0.96 # 1879 # 2319 # -1 # ID=3_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.324 1_21 - 848 AAA_21 PF13304.1 303 2.2e-07 22.8 64.4 1 3 0.058 2.6 -0.4 2.2 127 192 14 76 2 93 0.55 # 22944 # 25487 # -1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.267 1_21 - 848 AAA_21 PF13304.1 303 2.2e-07 22.8 64.4 2 3 5.7e-06 0.00025 12.8 18.1 1 207 99 296 99 311 0.57 # 22944 # 25487 # -1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.267 1_21 - 848 AAA_21 PF13304.1 303 2.2e-07 22.8 64.4 3 3 0.00048 0.021 6.5 36.0 15 302 458 676 248 677 0.67 # 22944 # 25487 # -1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.267 1_15 - 225 DDE_Tnp_IS240 PF13610.1 140 2.6e-44 142.4 3.5 1 1 1.6e-45 3.6e-44 141.9 3.5 3 139 72 203 70 204 0.95 # 13762 # 14436 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_24 - 225 DDE_Tnp_IS240 PF13610.1 140 3.2e-44 142.1 2.7 1 1 2e-45 4.5e-44 141.6 2.7 3 139 72 203 70 204 0.95 # 26937 # 27611 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_22 - 203 HTH_7 PF02796.10 45 4.8e-22 69.4 0.4 1 1 1.1e-23 4.8e-22 69.4 0.4 1 45 147 199 147 199 0.96 # 25699 # 26307 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.328 1_6 - 176 Acetyltransf_8 PF13523.1 152 3.2e-13 41.6 0.0 1 1 6.3e-14 2.8e-12 38.5 0.0 3 141 6 150 4 156 0.75 # 5280 # 5807 # -1 # ID=1_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.265 1_27 - 797 DEAD PF00270.24 169 4e-11 34.4 1.2 1 1 3.4e-12 1.5e-10 32.5 0.0 10 132 88 217 80 236 0.81 # 30539 # 32929 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.306 1_9 - 796 Hydrolase_6 PF13344.1 101 9.8e-06 17.2 0.5 1 1 1.8e-06 8.1e-05 14.3 0.1 6 51 612 657 609 698 0.82 # 6963 # 9350 # -1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 1_21 - 848 AAA_16 PF13191.1 185 0.00014 13.6 0.0 1 2 0.00013 0.0057 8.4 0.0 24 48 97 121 89 210 0.85 # 22944 # 25487 # -1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.267 1_21 - 848 AAA_16 PF13191.1 185 0.00014 13.6 0.0 2 2 0.014 0.6 1.8 0.1 136 184 617 667 485 668 0.77 # 22944 # 25487 # -1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.267 1_22 - 203 HTH_23 PF13384.1 50 4.6e-08 24.4 0.6 1 1 8.6e-09 9.5e-08 23.4 0.1 6 39 164 197 159 199 0.89 # 25699 # 26307 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.328 1_24 - 225 HTH_23 PF13384.1 50 6.5e-06 17.5 1.2 1 1 8.2e-06 9e-05 13.9 0.1 28 41 41 54 40 57 0.92 # 26937 # 27611 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_15 - 225 HTH_23 PF13384.1 50 7.1e-06 17.4 1.4 1 1 8.2e-06 9e-05 13.9 0.1 28 41 41 54 40 57 0.92 # 13762 # 14436 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 3_2 - 147 HTH_23 PF13384.1 50 0.00026 12.4 0.0 1 1 4.6e-05 0.0005 11.5 0.0 19 45 66 91 56 96 0.88 # 1879 # 2319 # -1 # ID=3_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.324 1_9 - 796 DUF1687 PF07955.6 133 0.003 9.3 3.9 1 3 0.093 4.1 -0.8 0.1 72 106 29 65 19 71 0.80 # 6963 # 9350 # -1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 1_9 - 796 DUF1687 PF07955.6 133 0.003 9.3 3.9 2 3 0.00023 0.01 7.6 0.5 28 114 91 173 82 175 0.78 # 6963 # 9350 # -1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 1_9 - 796 DUF1687 PF07955.6 133 0.003 9.3 3.9 3 3 0.04 1.8 0.3 0.0 30 115 619 699 605 709 0.65 # 6963 # 9350 # -1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 1_11 - 102 SH3BGR PF04908.10 99 6.1e-05 14.7 0.0 1 1 1.6e-06 7e-05 14.6 0.0 20 54 28 62 21 100 0.78 # 9785 # 10090 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.255 1_9 - 796 Hydrolase_3 PF08282.7 254 5.9e-10 30.8 9.7 1 3 0.036 1.6 -0.1 0.6 82 140 89 154 20 169 0.64 # 6963 # 9350 # -1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 1_9 - 796 Hydrolase_3 PF08282.7 254 5.9e-10 30.8 9.7 2 3 7.9e-07 3.5e-05 15.2 0.2 15 58 620 663 614 666 0.91 # 6963 # 9350 # -1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 1_9 - 796 Hydrolase_3 PF08282.7 254 5.9e-10 30.8 9.7 3 3 3.5e-08 1.5e-06 19.6 0.3 197 242 677 722 671 724 0.91 # 6963 # 9350 # -1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 1_6 - 176 Acetyltransf_7 PF13508.1 79 2.2e-08 26.0 0.0 1 1 7.2e-10 3.2e-08 25.5 0.0 11 77 68 145 58 147 0.74 # 5280 # 5807 # -1 # ID=1_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.265 1_6 - 176 Acetyltransf_10 PF13673.1 117 9.7e-05 14.3 0.0 1 1 3.4e-06 0.00015 13.7 0.0 29 117 36 145 12 145 0.68 # 5280 # 5807 # -1 # ID=1_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.265 1_22 - 203 HTH_11 PF08279.7 55 5.6e-05 14.6 0.2 1 1 9.5e-06 0.00021 12.7 0.1 7 34 170 194 166 195 0.78 # 25699 # 26307 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.328 3_2 - 147 HTH_11 PF08279.7 55 0.00014 13.3 0.2 1 1 1.2e-05 0.00026 12.4 0.2 16 43 65 92 49 100 0.82 # 1879 # 2319 # -1 # ID=3_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.324 1_15 - 225 Arg_repressor PF01316.16 70 0.00013 13.3 0.0 1 1 1.8e-05 0.00041 11.7 0.0 24 48 30 54 25 74 0.81 # 13762 # 14436 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_24 - 225 Arg_repressor PF01316.16 70 0.00013 13.2 0.0 1 1 1.8e-05 0.00041 11.7 0.0 24 48 30 54 25 74 0.81 # 26937 # 27611 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_1 - 264 MipZ PF09140.6 261 1.4e-06 19.3 0.3 1 1 4.3e-07 1.9e-05 15.6 0.3 2 43 3 45 2 156 0.70 # 570 # 1361 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 1_22 - 203 HTH_28 PF13518.1 52 6.1e-09 27.6 0.0 1 1 1.4e-09 1.6e-08 26.3 0.0 4 34 167 197 166 200 0.94 # 25699 # 26307 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.328 3_2 - 147 HTH_28 PF13518.1 52 3.6e-05 15.5 0.0 1 1 8.5e-06 9.4e-05 14.2 0.0 1 41 44 93 44 99 0.82 # 1879 # 2319 # -1 # ID=3_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.324 1_24 - 225 HTH_28 PF13518.1 52 3.7e-05 15.5 0.4 1 1 1.5e-05 0.00017 13.4 0.4 15 36 31 54 16 55 0.80 # 26937 # 27611 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_15 - 225 HTH_28 PF13518.1 52 4e-05 15.4 0.4 1 1 1.6e-05 0.00018 13.3 0.4 15 36 31 54 17 55 0.80 # 13762 # 14436 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_9 - 796 HAD PF12710.2 192 9e-19 60.1 0.0 1 1 4e-20 1.7e-18 59.2 0.0 1 191 493 698 493 699 0.66 # 6963 # 9350 # -1 # ID=1_9;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 1_11 - 102 Glutaredoxin PF00462.19 60 3.3e-13 41.3 0.0 1 1 1e-14 4.4e-13 40.8 0.0 2 51 18 67 17 76 0.95 # 9785 # 10090 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.255 1_1 - 264 VirC1 PF07015.6 231 4.2e-05 14.4 0.2 1 2 3.9e-06 0.00017 12.4 0.0 1 39 1 40 1 53 0.76 # 570 # 1361 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 1_1 - 264 VirC1 PF07015.6 231 4.2e-05 14.4 0.2 2 2 0.073 3.2 -1.6 0.0 83 111 123 152 95 165 0.75 # 570 # 1361 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 3_1 - 245 Methyltransf_26 PF13659.1 117 6.7e-09 27.6 0.0 1 1 2e-10 8.8e-09 27.2 0.0 2 81 32 105 31 148 0.90 # 437 # 1171 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.256 1_15 - 225 HTH_Tnp_4 PF13613.1 53 8e-05 14.0 0.3 1 1 1.3e-05 0.00029 12.2 0.3 30 49 41 60 18 63 0.84 # 13762 # 14436 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_24 - 225 HTH_Tnp_4 PF13613.1 53 8.3e-05 13.9 0.3 1 1 1.4e-05 0.0003 12.1 0.3 30 49 41 60 20 63 0.84 # 26937 # 27611 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_1 - 264 Fer4_NifH PF00142.13 273 5.1e-06 17.5 0.0 1 1 2.2e-07 9.5e-06 16.6 0.0 8 50 10 53 3 84 0.78 # 570 # 1361 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 1_26 - 504 TIGR03999 TIGR03999 375 2.4e-14 44.4 0.1 1 1 8e-16 3.5e-14 43.8 0.1 210 374 331 501 321 502 0.81 # 29009 # 30520 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.301 3_1 - 245 PCMT PF01135.14 210 1.6e-06 19.5 0.0 1 1 1e-07 4.6e-06 18.0 0.0 53 126 10 80 3 86 0.86 # 437 # 1171 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.256 1_22 - 203 CENP-B_N PF04218.8 53 1.5e-06 19.4 2.3 1 2 0.00037 0.016 6.4 0.3 13 35 117 139 115 142 0.85 # 25699 # 26307 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.328 1_22 - 203 CENP-B_N PF04218.8 53 1.5e-06 19.4 2.3 2 2 4.7e-06 0.00021 12.5 0.1 16 44 169 197 166 201 0.80 # 25699 # 26307 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.328 3_2 - 147 GntR PF00392.16 64 9.9e-05 13.6 0.0 1 1 4.6e-06 0.0002 12.6 0.0 17 59 57 99 45 100 0.87 # 1879 # 2319 # -1 # ID=3_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.324 1_17 - 1025 TIGR00422 TIGR00422 863 2.2e-140 460.6 24.0 1 3 1.9e-41 8.6e-40 127.8 1.3 5 237 5 238 1 265 0.92 # 14838 # 17912 # 1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_17 - 1025 TIGR00422 TIGR00422 863 2.2e-140 460.6 24.0 2 3 3.2e-106 1.4e-104 342.1 8.8 256 841 294 897 287 915 0.91 # 14838 # 17912 # 1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_17 - 1025 TIGR00422 TIGR00422 863 2.2e-140 460.6 24.0 3 3 0.0077 0.34 0.1 0.5 731 791 948 1006 938 1022 0.80 # 14838 # 17912 # 1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_26 - 504 Glyco_trans_1_4 PF13692.1 135 1.5e-10 33.1 0.0 1 1 8.8e-12 3.9e-10 31.8 0.0 7 123 325 447 321 468 0.80 # 29009 # 30520 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.301 1_11 - 102 DUF836 PF05768.9 81 1.7e-05 16.9 0.1 1 1 4.4e-07 1.9e-05 16.7 0.1 1 47 16 58 16 85 0.89 # 9785 # 10090 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.255 1_22 - 203 TetR_N PF00440.18 47 0.00011 13.6 0.1 1 1 6.1e-06 0.00027 12.4 0.1 15 35 174 194 174 195 0.94 # 25699 # 26307 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.328 1_17 - 1025 Zn-ribbon_8 PF09723.5 42 0.00028 12.6 0.3 1 1 4.5e-05 0.002 9.9 0.0 14 40 480 505 478 506 0.89 # 14838 # 17912 # 1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.288 1_24 - 225 rve PF00665.21 120 3.1e-18 57.8 0.9 1 2 0.086 1.9 0.4 0.0 83 102 30 49 17 52 0.88 # 26937 # 27611 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_24 - 225 rve PF00665.21 120 3.1e-18 57.8 0.9 2 2 7.7e-19 1.7e-17 55.4 0.4 2 117 66 174 65 176 0.93 # 26937 # 27611 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_15 - 225 rve PF00665.21 120 3.6e-18 57.6 0.6 1 2 0.083 1.8 0.5 0.0 83 102 30 49 12 52 0.89 # 13762 # 14436 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_15 - 225 rve PF00665.21 120 3.6e-18 57.6 0.6 2 2 1.1e-18 2.4e-17 54.9 0.4 2 117 66 174 65 176 0.93 # 13762 # 14436 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_22 - 203 HTH_Tnp_1 PF01527.15 76 0.00024 12.9 0.1 1 2 0.054 1.2 1.0 0.0 6 36 107 137 106 144 0.77 # 25699 # 26307 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.328 1_22 - 203 HTH_Tnp_1 PF01527.15 76 0.00024 12.9 0.1 2 2 0.00013 0.0029 9.4 0.0 15 42 168 194 164 198 0.87 # 25699 # 26307 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.328 1_24 - 225 HTH_Tnp_1 PF01527.15 76 0.0031 9.3 3.9 1 1 0.00016 0.0035 9.1 0.3 24 47 29 54 5 68 0.70 # 26937 # 27611 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_22 - 203 HTH_38 PF13936.1 44 7.9e-06 17.2 2.5 1 2 0.067 3 -0.6 0.2 6 20 121 135 114 143 0.58 # 25699 # 26307 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.328 1_22 - 203 HTH_38 PF13936.1 44 7.9e-06 17.2 2.5 2 2 2.2e-07 9.5e-06 16.9 0.2 15 39 170 194 159 198 0.91 # 25699 # 26307 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.328 3_1 - 245 Methyltransf_23 PF13489.1 161 2.3e-05 15.9 0.0 1 1 1.5e-06 6.4e-05 14.5 0.0 11 67 17 78 8 119 0.71 # 437 # 1171 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.256 1_6 - 176 Acetyltransf_1 PF00583.19 83 4.3e-15 47.3 0.0 1 1 1.5e-16 6.7e-15 46.7 0.0 5 82 69 145 65 146 0.92 # 5280 # 5807 # -1 # ID=1_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.265 1_13 - 570 DDE_Tnp_1 PF01609.16 213 4.7e-38 122.6 0.1 1 1 2.1e-39 4.7e-38 122.6 0.1 7 213 267 515 261 515 0.95 # 11362 # 13071 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.289 2_5 - 169 DDE_Tnp_1 PF01609.16 213 3.1e-11 34.9 0.2 1 1 2.3e-12 5.1e-11 34.2 0.2 67 166 9 154 2 164 0.88 # 2205 # 2711 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.272 1_22 - 203 HTH_40 PF14493.1 91 6.2e-05 15.0 0.1 1 1 4.1e-06 0.00018 13.5 0.1 7 31 169 193 165 195 0.92 # 25699 # 26307 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.328 1_22 - 203 HTH_3 PF01381.17 55 0.00034 12.2 0.5 1 1 1.9e-05 0.00084 11.0 0.0 7 29 173 195 170 198 0.88 # 25699 # 26307 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.328 1_15 - 225 DDE_3 PF13358.1 146 3.8e-06 18.5 0.4 1 1 3.2e-07 7.1e-06 17.6 0.3 26 95 74 144 58 205 0.75 # 13762 # 14436 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_24 - 225 DDE_3 PF13358.1 146 4.6e-06 18.2 0.3 1 1 4.5e-07 1e-05 17.1 0.2 26 95 74 143 60 198 0.76 # 26937 # 27611 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_15 - 225 DDE_Tnp_IS66 PF03050.9 271 1.9e-07 22.2 3.7 1 2 2.2e-08 4.8e-07 20.9 1.1 16 97 21 96 7 134 0.76 # 13762 # 14436 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_15 - 225 DDE_Tnp_IS66 PF03050.9 271 1.9e-07 22.2 3.7 2 2 0.015 0.33 1.8 0.1 243 263 163 183 155 190 0.79 # 13762 # 14436 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_24 - 225 DDE_Tnp_IS66 PF03050.9 271 2.5e-07 21.9 3.9 1 2 2.4e-08 5.4e-07 20.8 1.1 18 97 23 96 8 136 0.76 # 26937 # 27611 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_24 - 225 DDE_Tnp_IS66 PF03050.9 271 2.5e-07 21.9 3.9 2 2 0.017 0.38 1.6 0.1 243 264 163 184 158 190 0.81 # 26937 # 27611 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 3_2 - 147 FaeA PF04703.7 62 0.00024 13.0 0.1 1 1 9.1e-06 0.0004 12.3 0.1 13 47 62 96 44 100 0.77 # 1879 # 2319 # -1 # ID=3_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.324 2_1 - 335 TrmB PF01978.14 68 0.00024 12.6 0.1 1 1 1.6e-05 0.00069 11.1 0.0 23 56 45 78 28 93 0.89 # 1 # 1005 # 1 # ID=2_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.264 1_1 - 264 CbiA PF01656.18 195 4.4e-31 99.5 0.4 1 1 1.2e-32 5.5e-31 99.2 0.4 1 193 4 225 4 227 0.80 # 570 # 1361 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 1_21 - 848 ABC_tran PF00005.22 137 0.042 5.9 20.3 1 2 7.3e-05 0.0032 9.5 2.4 12 42 98 127 89 345 0.80 # 22944 # 25487 # -1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.267 1_21 - 848 ABC_tran PF00005.22 137 0.042 5.9 20.3 2 2 0.011 0.46 2.5 6.8 44 125 545 625 391 642 0.70 # 22944 # 25487 # -1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.267 1_6 - 176 TIGR01575 TIGR01575 132 3.1e-12 38.3 0.1 1 1 9.7e-14 4.2e-12 37.8 0.1 38 122 66 155 28 162 0.83 # 5280 # 5807 # -1 # ID=1_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.265 3_2 - 147 Rrf2 PF02082.15 83 0.00021 13.2 0.3 1 1 9.4e-06 0.00041 12.2 0.2 17 61 56 100 40 104 0.83 # 1879 # 2319 # -1 # ID=3_2;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.324 3_1 - 245 Methyltransf_18 PF12847.2 112 9.5e-08 24.4 0.0 1 1 3e-09 1.3e-07 23.9 0.0 3 66 32 91 30 151 0.76 # 437 # 1171 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.256 1_27 - 797 SecA_DEAD PF07517.9 266 1.5e-97 317.7 1.3 1 1 3.4e-99 1.5e-97 317.7 1.3 7 265 8 385 2 386 0.96 # 30539 # 32929 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.306 1_21 - 848 SMC_N PF02463.14 220 0.00022 12.2 0.2 1 2 4.9e-06 0.00022 12.2 0.2 17 41 90 114 80 136 0.82 # 22944 # 25487 # -1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.267 1_21 - 848 SMC_N PF02463.14 220 0.00022 12.2 0.2 2 2 0.023 0.99 0.3 29.4 135 203 290 676 204 688 0.73 # 22944 # 25487 # -1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.267 1_21 - 848 AAA_29 PF13555.1 62 0.00012 13.3 0.6 1 1 1.1e-05 0.00048 11.4 0.6 22 38 98 112 68 127 0.71 # 22944 # 25487 # -1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.267 3_1 - 245 Methyltransf_25 PF13649.1 101 0.0003 12.9 0.0 1 1 1.5e-05 0.00064 11.9 0.0 1 69 34 96 34 121 0.83 # 437 # 1171 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.256 1_17 - 1025 TIGR00392 TIGR00392 861 3.2e-288 949.9 16.5 1 1 9.5e-290 4.2e-288 949.5 16.5 10 857 7 825 1 828 0.97 # 14838 # 17912 # 1 # ID=1_17;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.288 3_1 - 245 NodS PF05401.6 201 1.3e-05 16.4 0.0 1 1 4.8e-07 2.1e-05 15.7 0.0 44 107 31 94 9 115 0.84 # 437 # 1171 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.256 3_1 - 245 TIGR00755 TIGR00755 256 1e-47 154.0 1.2 1 1 2.9e-49 1.3e-47 153.6 1.2 6 254 7 237 3 239 0.88 # 437 # 1171 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.256 1_21 - 848 DUF948 PF06103.6 90 0.0026 9.4 7.1 1 2 0.00099 0.043 5.5 0.2 54 76 289 311 236 316 0.82 # 22944 # 25487 # -1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.267 1_21 - 848 DUF948 PF06103.6 90 0.0026 9.4 7.1 2 2 0.0017 0.073 4.8 0.3 22 63 479 518 476 530 0.84 # 22944 # 25487 # -1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.267 1_24 - 225 HTH_32 PF13565.1 77 3.9e-08 25.8 0.6 1 2 6.6e-07 1.4e-05 17.6 0.1 49 76 26 50 12 51 0.87 # 26937 # 27611 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_24 - 225 HTH_32 PF13565.1 77 3.9e-08 25.8 0.6 2 2 0.002 0.044 6.4 0.0 28 63 135 171 102 183 0.72 # 26937 # 27611 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_15 - 225 HTH_32 PF13565.1 77 1e-07 24.5 0.7 1 2 6.3e-07 1.4e-05 17.6 0.1 49 76 26 50 11 51 0.86 # 13762 # 14436 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_15 - 225 HTH_32 PF13565.1 77 1e-07 24.5 0.7 2 2 0.0051 0.11 5.1 0.0 29 63 136 171 100 183 0.73 # 13762 # 14436 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/550e1a9e-1345-4346-bdea-c6a08fa44478 # Target file: checkm_output/bins/pGCA_900086615.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_900086615.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/550e1a9e-1345-4346-bdea-c6a08fa44478 checkm_output/bins/pGCA_900086615.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/Staphylococcus/training_20210111 # Date: Mon Jan 11 14:55:41 2021 # [ok]