# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_28 - 489 AAA_19 PF13245.1 76 4.4e-07 21.4 0.0 1 2 4.4e-06 0.0002 12.9 0.0 14 33 35 53 30 60 0.87 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_19 PF13245.1 76 4.4e-07 21.4 0.0 2 2 0.0011 0.05 5.2 0.0 13 35 328 348 319 386 0.80 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 DUF258 PF03193.11 161 7.9e-10 29.9 0.1 1 2 2.5e-06 0.00011 13.2 0.0 36 67 32 63 1 73 0.78 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 DUF258 PF03193.11 161 7.9e-10 29.9 0.1 2 2 1.1e-06 4.8e-05 14.3 0.0 20 58 308 347 290 436 0.85 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_26 - 204 GerE PF00196.14 58 0.00023 12.3 0.1 1 1 1e-05 0.00044 11.4 0.1 11 35 168 192 166 197 0.93 # 23234 # 23845 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 2_7 - 548 XdhC_C PF13478.1 136 8.2e-05 14.7 0.0 1 1 4.7e-06 0.00021 13.4 0.0 1 49 253 302 253 321 0.79 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 TIGR01978 TIGR01978 243 1.2e-21 68.7 5.8 1 4 2e-06 9e-05 13.4 0.2 27 70 32 79 7 97 0.72 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR01978 TIGR01978 243 1.2e-21 68.7 5.8 2 4 1e-06 4.6e-05 14.3 0.0 143 229 101 185 88 200 0.81 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR01978 TIGR01978 243 1.2e-21 68.7 5.8 3 4 1.2e-08 5.1e-07 20.7 0.0 4 50 302 348 299 366 0.88 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR01978 TIGR01978 243 1.2e-21 68.7 5.8 4 4 1e-08 4.5e-07 20.9 0.0 127 210 394 472 347 479 0.65 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_7 - 548 TIGR01292 TIGR01292 300 1.2e-22 71.4 5.7 1 1 1.4e-22 6.1e-21 65.8 5.7 1 294 86 408 86 413 0.76 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 AAA_18 PF13238.1 129 1.7e-07 23.3 3.9 1 2 1.6e-05 0.00069 11.7 0.3 1 42 34 81 34 167 0.81 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_18 PF13238.1 129 1.7e-07 23.3 3.9 2 2 1.5e-05 0.00067 11.7 0.0 1 23 327 359 327 469 0.76 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_1 - 726 PHP PF02811.14 175 0.00016 13.2 0.2 1 2 3.7e-06 0.00016 13.2 0.2 1 133 24 162 24 201 0.64 # 109 # 2286 # 1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 1_1 - 726 PHP PF02811.14 175 0.00016 13.2 0.2 2 2 0.056 2.5 -0.4 0.5 145 169 311 335 223 480 0.70 # 109 # 2286 # 1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 2_7 - 548 NAD_binding_7 PF13241.1 103 4.1e-05 15.6 0.1 1 2 0.00053 0.023 6.7 0.0 10 38 88 116 84 177 0.90 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 NAD_binding_7 PF13241.1 103 4.1e-05 15.6 0.1 2 2 0.00075 0.033 6.3 0.0 8 45 251 307 244 360 0.56 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_25 - 140 MarR_2 PF12802.2 62 9.2e-14 42.7 0.0 1 1 2.7e-15 1.2e-13 42.4 0.0 1 61 29 87 29 88 0.95 # 22462 # 22881 # 1 # ID=1_25;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.264 2_7 - 548 FAD_oxidored PF12831.2 428 1.3e-12 39.2 1.3 1 2 1.3e-09 5.6e-08 23.9 0.3 1 45 87 130 87 195 0.80 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 FAD_oxidored PF12831.2 428 1.3e-12 39.2 1.3 2 2 1.1e-06 5e-05 14.2 0.0 78 147 281 347 240 349 0.74 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 TIGR00275 TIGR00275 401 5.2e-08 23.5 8.7 1 3 8.6e-06 0.00038 10.7 2.4 2 31 89 118 88 126 0.90 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 TIGR00275 TIGR00275 401 5.2e-08 23.5 8.7 2 3 0.021 0.94 -0.4 0.0 140 160 203 223 195 239 0.83 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 TIGR00275 TIGR00275 401 5.2e-08 23.5 8.7 3 3 5.5e-07 2.4e-05 14.7 0.1 76 160 262 349 239 357 0.81 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 Thymidylate_kin PF02223.12 186 0.081 4.0 13.4 1 2 0.00025 0.011 6.8 0.3 3 23 38 58 37 66 0.88 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Thymidylate_kin PF02223.12 186 0.081 4.0 13.4 2 2 0.0012 0.053 4.6 0.0 3 21 331 349 329 356 0.89 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR03598 TIGR03598 186 7.2e-05 14.0 4.6 1 3 0.00013 0.0055 7.8 0.0 12 43 25 56 19 82 0.82 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR03598 TIGR03598 186 7.2e-05 14.0 4.6 2 3 0.097 4.3 -1.6 3.5 143 178 217 252 185 276 0.57 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR03598 TIGR03598 186 7.2e-05 14.0 4.6 3 3 0.0014 0.06 4.4 0.0 18 41 324 347 310 356 0.85 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Ras PF00071.17 162 4e-06 18.0 3.4 1 2 1.6e-05 0.00035 11.7 0.1 1 44 33 77 33 86 0.85 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Ras PF00071.17 162 4e-06 18.0 3.4 2 2 0.00098 0.021 5.9 0.0 2 18 327 343 326 378 0.86 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_1 - 726 Ras PF00071.17 162 0.00032 11.9 2.3 1 1 2.9e-05 0.00063 10.9 0.0 3 35 268 299 267 317 0.88 # 109 # 2286 # 1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 1_28 - 489 AAA_24 PF13479.1 213 4.6e-05 14.8 1.1 1 2 0.00033 0.015 6.6 0.1 5 25 33 54 30 57 0.85 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_24 PF13479.1 213 4.6e-05 14.8 1.1 2 2 0.00053 0.023 6.0 0.1 5 21 326 342 324 348 0.87 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_25 - 140 HTH_Crp_2 PF13545.1 76 0.00026 12.6 0.0 1 1 9.9e-06 0.00044 11.8 0.0 32 67 51 91 42 99 0.82 # 22462 # 22881 # 1 # ID=1_25;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.264 2_3 - 136 HTH_17 PF12728.2 51 0.0001 14.3 0.0 1 1 4.9e-06 0.00022 13.3 0.0 2 41 3 43 2 46 0.79 # 718 # 1125 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_28 - 489 AAA_22 PF13401.1 131 2.5e-13 42.1 2.9 1 2 3.8e-06 8.3e-05 14.5 0.0 7 107 34 143 32 158 0.61 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_22 PF13401.1 131 2.5e-13 42.1 2.9 2 2 6.5e-10 1.4e-08 26.7 0.0 5 120 325 460 319 470 0.78 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_1 - 726 AAA_22 PF13401.1 131 2.8e-07 22.5 0.0 1 2 1.6e-07 3.4e-06 19.0 0.0 4 87 264 341 259 354 0.82 # 109 # 2286 # 1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 1_1 - 726 AAA_22 PF13401.1 131 2.8e-07 22.5 0.0 2 2 0.083 1.8 0.5 0.0 76 101 602 629 537 660 0.62 # 109 # 2286 # 1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 2_3 - 136 MerR-DNA-bind PF09278.6 65 2.8e-17 54.7 1.5 1 1 9.3e-19 4.1e-17 54.2 1.5 2 65 47 110 46 110 0.97 # 718 # 1125 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_28 - 489 FtsK_SpoIIIE PF01580.13 205 2e-05 15.9 0.2 1 2 0.00092 0.04 5.1 0.0 40 59 33 52 12 58 0.83 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 FtsK_SpoIIIE PF01580.13 205 2e-05 15.9 0.2 2 2 0.00011 0.0049 8.1 0.0 28 58 314 344 298 348 0.80 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_7 - 548 K_oxygenase PF13434.1 341 3.3e-10 31.1 1.5 1 3 0.0086 0.38 1.3 0.0 3 25 86 108 85 118 0.82 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 K_oxygenase PF13434.1 341 3.3e-10 31.1 1.5 2 3 8.3e-09 3.6e-07 21.0 0.0 140 232 205 290 190 302 0.83 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 K_oxygenase PF13434.1 341 3.3e-10 31.1 1.5 3 3 0.00033 0.014 5.9 0.2 119 160 310 351 294 385 0.66 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_3 - 136 MerR PF00376.18 38 5.5e-18 56.1 0.1 1 1 1.9e-19 8.2e-18 55.5 0.1 1 38 4 41 4 41 0.99 # 718 # 1125 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_28 - 489 TIGR00611 TIGR00611 365 5.8e-08 23.6 10.2 1 3 2.1e-05 0.00091 9.8 0.0 27 87 35 95 11 118 0.83 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR00611 TIGR00611 365 5.8e-08 23.6 10.2 2 3 0.012 0.51 0.8 0.0 291 328 109 146 107 168 0.81 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR00611 TIGR00611 365 5.8e-08 23.6 10.2 3 3 1.7e-07 7.4e-06 16.7 0.1 15 45 315 346 303 351 0.86 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Herpes_TK PF00693.13 281 0.00019 12.4 1.8 1 2 0.0058 0.26 2.1 0.0 1 34 38 71 38 83 0.77 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Herpes_TK PF00693.13 281 0.00019 12.4 1.8 2 2 5.9e-05 0.0026 8.6 0.0 1 42 331 370 331 400 0.81 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR00436 TIGR00436 270 0.0002 12.2 7.1 1 3 0.00024 0.011 6.5 0.1 2 23 33 54 32 61 0.90 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR00436 TIGR00436 270 0.0002 12.2 7.1 2 3 0.027 1.2 -0.2 3.0 100 160 194 260 156 322 0.55 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR00436 TIGR00436 270 0.0002 12.2 7.1 3 3 0.00039 0.017 5.8 0.0 2 26 326 350 325 397 0.90 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Arch_ATPase PF01637.13 234 8.8e-08 23.8 5.2 1 3 7e-05 0.0031 8.9 0.0 24 147 35 147 22 157 0.57 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Arch_ATPase PF01637.13 234 8.8e-08 23.8 5.2 2 3 0.021 0.91 0.8 1.5 51 101 186 236 160 277 0.51 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Arch_ATPase PF01637.13 234 8.8e-08 23.8 5.2 3 3 2.4e-06 0.00011 13.7 0.0 25 101 329 410 321 479 0.73 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_7 - 548 DAO PF01266.19 358 2.5e-08 24.8 0.7 1 2 1e-06 4.5e-05 14.1 0.1 1 35 87 121 87 223 0.79 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 DAO PF01266.19 358 2.5e-08 24.8 0.7 2 2 3.3e-05 0.0014 9.2 0.1 152 205 296 352 253 444 0.78 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 Arf PF00025.16 175 0.00019 12.5 1.8 1 2 0.00011 0.005 7.8 0.0 16 40 33 57 22 81 0.77 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Arf PF00025.16 175 0.00019 12.5 1.8 2 2 0.0045 0.2 2.6 0.0 16 35 326 345 314 372 0.80 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR00041 TIGR00041 196 0.022 5.9 11.6 1 2 0.00014 0.0063 7.6 0.3 8 32 35 59 32 68 0.82 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR00041 TIGR00041 196 0.022 5.9 11.6 2 2 0.00096 0.042 4.9 0.0 5 28 325 348 321 362 0.86 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 NB-ARC PF00931.17 287 9.2e-10 29.5 0.2 1 2 5.8e-06 0.00025 11.6 0.0 18 119 30 136 21 149 0.73 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 NB-ARC PF00931.17 287 9.2e-10 29.5 0.2 2 2 5.7e-07 2.5e-05 14.9 0.1 22 46 327 352 311 484 0.62 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_7 - 548 TIGR01317 TIGR01317 485 2.2e-13 41.2 0.6 1 3 0.0003 0.013 5.6 0.0 145 185 87 127 45 137 0.80 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 TIGR01317 TIGR01317 485 2.2e-13 41.2 0.6 2 3 0.0025 0.11 2.6 0.0 142 178 249 285 241 288 0.90 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 TIGR01317 TIGR01317 485 2.2e-13 41.2 0.6 3 3 2.1e-11 9.1e-10 29.3 0.1 376 472 314 408 297 412 0.81 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 AAA_23 PF13476.1 202 9.4e-07 21.1 26.4 1 1 1.6e-07 7.1e-06 18.2 0.0 22 40 327 345 310 435 0.91 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Mg_chelatase PF01078.16 207 2.8e-05 15.1 0.0 1 2 0.0005 0.022 5.6 0.0 24 116 33 130 10 148 0.66 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Mg_chelatase PF01078.16 207 2.8e-05 15.1 0.0 2 2 0.00036 0.016 6.1 0.0 4 43 306 345 303 375 0.82 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_26 - 204 HTH_22 PF13309.1 64 2.7e-07 22.1 0.9 1 3 0.027 1.2 0.8 0.0 23 38 71 86 62 95 0.84 # 23234 # 23845 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_26 - 204 HTH_22 PF13309.1 64 2.7e-07 22.1 0.9 2 3 0.0014 0.061 4.9 0.1 3 41 109 147 107 149 0.93 # 23234 # 23845 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_26 - 204 HTH_22 PF13309.1 64 2.7e-07 22.1 0.9 3 3 4.4e-06 0.0002 12.9 0.0 43 61 176 194 171 195 0.94 # 23234 # 23845 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Bac_DnaA PF00308.13 219 1.1e-05 16.8 0.1 1 2 0.00062 0.027 5.8 0.1 30 59 27 56 10 70 0.83 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Bac_DnaA PF00308.13 219 1.1e-05 16.8 0.1 2 2 0.00011 0.0049 8.2 0.0 39 68 329 358 324 374 0.84 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR03594 TIGR03594 432 0.0088 6.4 10.7 1 2 0.00012 0.0055 7.1 0.0 177 199 33 55 12 62 0.78 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR03594 TIGR03594 432 0.0088 6.4 10.7 2 2 0.00069 0.03 4.6 0.0 2 23 326 347 325 352 0.78 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_7 - 548 Pyr_redox_2 PF07992.9 201 1.5e-41 134.2 0.0 1 1 8.3e-43 3.6e-41 133.0 0.0 1 197 87 390 87 394 0.93 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 4_1 - 225 MULE PF10551.4 93 5.6e-05 15.1 0.0 1 1 2.8e-06 0.00012 14.0 0.0 19 77 92 147 64 161 0.84 # 43 # 717 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 2_4 - 118 Thioredoxin_2 PF13098.1 112 2.4e-08 25.9 0.0 1 1 7.8e-10 3.4e-08 25.5 0.0 4 63 45 101 42 111 0.85 # 1142 # 1495 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.384 4_1 - 225 HEM4 PF02602.10 231 0.0002 12.4 0.1 1 1 8.7e-06 0.00038 11.4 0.1 125 154 24 53 9 72 0.80 # 43 # 717 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_11 - 315 HTH_36 PF13730.1 55 8e-08 24.2 0.5 1 1 4.3e-09 1.9e-07 23.0 0.5 2 54 32 95 31 96 0.85 # 8777 # 9721 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.279 1_25 - 140 Penicillinase_R PF03965.11 115 0.00021 13.2 0.0 1 1 6.6e-06 0.00029 12.7 0.0 1 59 31 85 31 130 0.80 # 22462 # 22881 # 1 # ID=1_25;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.264 1_28 - 489 SRP54 PF00448.17 196 2.6e-05 15.4 8.6 1 2 3e-05 0.0013 9.9 0.4 3 28 33 58 31 67 0.85 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 SRP54 PF00448.17 196 2.6e-05 15.4 8.6 2 2 2.7e-05 0.0012 10.1 0.0 3 23 326 346 324 374 0.81 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_33 PF13671.1 143 1.6e-07 23.1 0.3 1 2 2.6e-05 0.0011 10.6 0.0 3 38 35 75 34 103 0.79 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_33 PF13671.1 143 1.6e-07 23.1 0.3 2 2 6.3e-05 0.0028 9.3 0.0 2 22 327 347 327 397 0.81 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR01039 TIGR01039 462 2.4e-05 14.7 0.1 1 2 0.00029 0.013 5.7 0.0 145 174 32 60 15 71 0.75 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR01039 TIGR01039 462 2.4e-05 14.7 0.1 2 2 0.00013 0.0059 6.8 0.0 109 168 291 348 274 354 0.72 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_30 PF13604.1 196 1.1e-05 16.8 4.0 1 2 3.4e-05 0.0015 9.9 0.0 22 49 35 62 25 113 0.85 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_30 PF13604.1 196 1.1e-05 16.8 4.0 2 2 0.00032 0.014 6.7 0.0 22 43 328 349 320 375 0.82 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Miro PF08477.8 119 5.1e-11 34.9 0.1 1 2 1.3e-07 3e-06 19.5 0.0 1 49 33 80 33 104 0.76 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Miro PF08477.8 119 5.1e-11 34.9 0.1 2 2 5.8e-05 0.0013 11.0 0.0 2 20 327 345 326 365 0.88 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_1 - 726 Miro PF08477.8 119 0.00023 13.4 1.2 1 1 5.7e-05 0.0013 11.1 0.1 3 34 268 299 267 400 0.78 # 109 # 2286 # 1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 2_7 - 548 3HCDH_N PF02737.13 180 1.1e-05 17.0 0.1 1 1 2.4e-07 1.1e-05 17.0 0.1 2 85 253 339 252 341 0.81 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 AAA_17 PF13207.1 121 1e-09 31.0 0.8 1 2 8e-06 0.00018 14.1 0.7 1 23 33 55 33 244 0.78 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_17 PF13207.1 121 1e-09 31.0 0.8 2 2 2.5e-05 0.00054 12.5 0.0 2 20 327 345 326 448 0.66 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 4_1 - 225 AAA_17 PF13207.1 121 4.4e-06 19.3 1.4 1 1 3e-07 6.5e-06 18.8 1.4 23 113 24 122 20 206 0.85 # 43 # 717 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_28 - 489 Pox_A32 PF04665.7 241 6.4e-07 20.6 0.1 1 2 3.1e-05 0.0014 9.7 0.0 8 35 25 53 19 58 0.80 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Pox_A32 PF04665.7 241 6.4e-07 20.6 0.1 2 2 0.00014 0.006 7.6 0.0 15 37 326 348 317 350 0.91 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Sigma54_activat PF00158.21 168 9.8e-06 16.9 0.1 1 2 0.00097 0.043 5.0 0.0 23 52 32 61 12 76 0.80 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Sigma54_activat PF00158.21 168 9.8e-06 16.9 0.1 2 2 5.4e-05 0.0024 9.1 0.0 9 46 311 348 305 362 0.87 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_4 - 118 Thioredoxin_9 PF14595.1 129 2.5e-05 15.6 0.0 1 1 6.9e-07 3e-05 15.3 0.0 36 90 41 96 25 111 0.76 # 1142 # 1495 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.384 1_25 - 140 B-block_TFIIIC PF04182.7 75 2.6e-05 15.8 0.7 1 2 0.0075 0.33 2.7 0.1 29 48 12 31 3 47 0.83 # 22462 # 22881 # 1 # ID=1_25;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.264 1_25 - 140 B-block_TFIIIC PF04182.7 75 2.6e-05 15.8 0.7 2 2 1.1e-05 0.00046 11.8 0.1 25 54 54 83 47 113 0.82 # 22462 # 22881 # 1 # ID=1_25;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.264 1_24 - 324 ADH_N PF08240.7 109 2.2e-11 35.3 0.0 1 2 4.2e-11 1.8e-09 29.1 0.0 2 61 29 86 28 91 0.90 # 21367 # 22338 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 1_24 - 324 ADH_N PF08240.7 109 2.2e-11 35.3 0.0 2 2 0.0023 0.1 4.2 0.0 87 109 91 113 87 113 0.86 # 21367 # 22338 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 1_6 - 116 HTH_34 PF13601.1 80 0.00016 13.5 0.2 1 1 1.1e-05 0.00024 12.9 0.2 2 49 44 91 43 96 0.93 # 6178 # 6525 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.256 1_25 - 140 HTH_34 PF13601.1 80 0.00016 13.5 0.1 1 1 1.4e-05 0.00031 12.5 0.1 4 63 37 95 34 106 0.87 # 22462 # 22881 # 1 # ID=1_25;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.264 1_26 - 204 HTH_29 PF13551.1 112 1.3e-06 20.3 0.3 1 2 0.071 3.1 -0.2 0.0 21 55 116 150 104 164 0.66 # 23234 # 23845 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_26 - 204 HTH_29 PF13551.1 112 1.3e-06 20.3 0.3 2 2 2.5e-07 1.1e-05 17.3 0.0 4 34 168 197 166 199 0.91 # 23234 # 23845 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 2_7 - 548 Lycopene_cycl PF05834.7 374 3.1e-05 14.7 1.0 1 2 0.00031 0.014 6.0 0.4 1 33 87 117 87 120 0.91 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 Lycopene_cycl PF05834.7 374 3.1e-05 14.7 1.0 2 2 0.00016 0.0069 7.0 0.0 64 143 273 351 268 372 0.81 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_25 - 140 MarR PF01047.17 59 7.7e-15 46.2 0.0 1 1 2.6e-16 1.1e-14 45.7 0.0 1 59 31 89 31 89 0.98 # 22462 # 22881 # 1 # ID=1_25;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.264 2_4 - 118 DUF953 PF06110.6 119 6.2e-07 20.7 0.0 1 1 2e-08 8.7e-07 20.2 0.0 36 82 56 102 29 106 0.82 # 1142 # 1495 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.384 1_6 - 116 HTH_20 PF12840.2 61 2.7e-05 15.7 0.0 1 1 7.7e-07 3.4e-05 15.4 0.0 15 57 48 89 34 93 0.87 # 6178 # 6525 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.256 2_7 - 548 FG-GAP PF01839.18 34 3.4e-05 15.3 1.8 1 1 2e-06 8.9e-05 14.0 1.8 8 31 78 97 76 98 0.89 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 ArgK PF03308.11 267 0.0079 6.7 6.9 1 3 0.014 0.63 0.4 0.1 31 55 33 57 27 66 0.80 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ArgK PF03308.11 267 0.0079 6.7 6.9 2 3 0.089 3.9 -2.2 0.8 181 217 215 251 197 284 0.45 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ArgK PF03308.11 267 0.0079 6.7 6.9 3 3 3.1e-05 0.0013 9.2 0.1 5 52 304 347 300 352 0.84 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_6 - 116 HTH_5 PF01022.15 47 1.7e-17 54.6 1.6 1 1 6.8e-19 3e-17 53.9 1.6 1 45 41 86 41 88 0.95 # 6178 # 6525 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.256 1_24 - 324 TIGR02817 TIGR02817 336 2.7e-18 57.8 0.0 1 1 9.2e-20 4.1e-18 57.3 0.0 26 215 25 218 9 231 0.85 # 21367 # 22338 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 2_7 - 548 Pyr_redox_3 PF13738.1 203 2.1e-16 52.3 0.5 1 2 5.2e-13 2.3e-11 35.9 0.0 1 200 89 283 89 286 0.63 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 Pyr_redox_3 PF13738.1 203 2.1e-16 52.3 0.5 2 2 2e-06 8.6e-05 14.4 0.1 82 147 291 357 287 390 0.70 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_25 - 140 HTH_24 PF13412.1 48 8.3e-05 13.8 0.0 1 1 3.4e-06 0.00015 12.9 0.0 8 48 38 78 32 78 0.89 # 22462 # 22881 # 1 # ID=1_25;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.264 1_28 - 489 AAA_21 PF13304.1 303 5.8e-20 64.1 8.3 1 4 8.1e-06 0.00035 12.3 1.1 3 19 35 51 34 57 0.92 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_21 PF13304.1 303 5.8e-20 64.1 8.3 2 4 4.2e-08 1.8e-06 19.8 0.0 236 303 102 163 67 163 0.83 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_21 PF13304.1 303 5.8e-20 64.1 8.3 3 4 3.2e-08 1.4e-06 20.1 0.0 3 21 328 346 327 363 0.86 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_21 PF13304.1 303 5.8e-20 64.1 8.3 4 4 4.9e-06 0.00022 13.0 0.2 232 302 405 469 360 470 0.70 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_7 - 548 FAD_binding_2 PF00890.19 417 3.8e-09 27.5 7.0 1 3 4.8e-10 2.1e-08 25.1 2.7 1 36 87 121 87 128 0.91 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 FAD_binding_2 PF00890.19 417 3.8e-09 27.5 7.0 2 3 0.0019 0.085 3.3 0.1 141 204 291 351 251 366 0.76 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 FAD_binding_2 PF00890.19 417 3.8e-09 27.5 7.0 3 3 0.08 3.5 -2.0 0.0 374 402 360 390 356 397 0.77 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 4_1 - 225 DDE_Tnp_IS240 PF13610.1 140 3.5e-44 141.9 2.5 1 1 1.1e-45 4.9e-44 141.5 2.5 3 139 72 203 70 204 0.95 # 43 # 717 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_28 - 489 TIGR03263 TIGR03263 180 0.012 6.7 8.9 1 4 0.0032 0.14 3.2 0.1 6 25 36 55 32 64 0.81 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR03263 TIGR03263 180 0.012 6.7 8.9 2 4 0.04 1.8 -0.4 0.8 87 151 161 219 141 230 0.58 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR03263 TIGR03263 180 0.012 6.7 8.9 3 4 0.078 3.5 -1.3 0.1 130 149 253 272 224 285 0.67 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR03263 TIGR03263 180 0.012 6.7 8.9 4 4 0.00037 0.016 6.2 0.0 4 31 327 354 324 361 0.84 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_7 - 548 UDPG_MGDP_dh_N PF03721.9 185 4.7e-05 14.6 0.0 1 1 2.5e-06 0.00011 13.4 0.0 2 39 252 289 251 354 0.75 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 IstB_IS21 PF01695.12 178 1.1e-07 23.2 0.1 1 2 0.0001 0.0044 8.2 0.0 42 70 26 54 3 82 0.78 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 IstB_IS21 PF01695.12 178 1.1e-07 23.2 0.1 2 2 9.5e-06 0.00042 11.5 0.0 46 70 323 347 307 366 0.84 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_26 - 204 HTH_7 PF02796.10 45 2.2e-23 73.7 1.3 1 1 6e-25 2.6e-23 73.4 0.2 1 44 147 198 147 199 0.95 # 23234 # 23845 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 SbcCD_C PF13558.1 90 0.00024 12.8 7.3 1 2 0.0048 0.21 3.4 0.1 30 77 100 134 94 146 0.58 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 SbcCD_C PF13558.1 90 0.00024 12.8 7.3 2 2 3.8e-05 0.0017 10.1 0.1 23 84 400 448 367 454 0.71 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_25 - 140 DUF2250 PF10007.4 93 0.00012 13.7 0.0 1 1 4.4e-06 0.00019 13.1 0.0 7 58 32 83 26 113 0.89 # 22462 # 22881 # 1 # ID=1_25;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.264 2_6 - 129 ATP-synt_8 PF00895.15 54 0.00055 11.9 0.9 1 2 0.079 3.5 -0.2 0.2 16 29 30 43 26 49 0.76 # 2260 # 2646 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.424 2_6 - 129 ATP-synt_8 PF00895.15 54 0.00055 11.9 0.9 2 2 3.9e-05 0.0017 10.3 0.0 8 47 73 112 69 119 0.57 # 2260 # 2646 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.424 2_7 - 548 2-Hacid_dh_C PF02826.14 178 0.00029 11.7 0.3 1 3 0.077 3.4 -1.5 0.0 38 67 87 116 57 127 0.86 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 2-Hacid_dh_C PF02826.14 178 0.00029 11.7 0.3 2 3 4.5e-05 0.002 9.0 0.0 37 70 251 284 237 304 0.83 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 2-Hacid_dh_C PF02826.14 178 0.00029 11.7 0.3 3 3 0.065 2.9 -1.3 0.0 47 108 293 355 291 373 0.62 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_4 - 163 Peptidase_M50 PF02163.17 192 0.048 4.3 11.1 1 1 0.0036 0.16 2.6 11.1 117 142 35 119 8 124 0.66 # 3975 # 4463 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.186 1_28 - 489 ATP_bind_1 PF03029.12 238 2.6e-05 15.6 1.1 1 4 0.0013 0.057 4.6 0.0 2 28 37 63 36 81 0.85 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ATP_bind_1 PF03029.12 238 2.6e-05 15.6 1.1 2 4 0.03 1.3 0.2 0.1 63 119 248 305 192 315 0.77 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ATP_bind_1 PF03029.12 238 2.6e-05 15.6 1.1 3 4 0.00042 0.019 6.2 0.0 2 23 330 351 329 392 0.89 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ATP_bind_1 PF03029.12 238 2.6e-05 15.6 1.1 4 4 0.069 3 -1.0 0.0 134 168 432 466 416 481 0.81 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_14 PF13173.1 128 1.1e-09 30.1 4.5 1 2 2.4e-05 0.00052 11.7 0.3 4 42 33 81 30 174 0.57 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_14 PF13173.1 128 1.1e-09 30.1 4.5 2 2 6.4e-07 1.4e-05 16.8 0.1 2 57 324 382 323 484 0.67 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_1 - 726 AAA_14 PF13173.1 128 0.018 6.7 12.2 1 2 3.2e-05 0.0007 11.3 0.3 4 72 266 335 263 384 0.65 # 109 # 2286 # 1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 1_1 - 726 AAA_14 PF13173.1 128 0.018 6.7 12.2 2 2 0.02 0.43 2.3 0.4 21 72 573 624 546 659 0.63 # 109 # 2286 # 1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 2_7 - 548 Thi4 PF01946.12 230 0.00017 12.5 0.2 1 1 9.7e-06 0.00043 11.1 0.2 17 56 85 123 74 140 0.80 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 AAA PF00004.24 132 2.5e-09 29.2 0.6 1 2 1.3e-06 5.9e-05 15.1 0.0 2 28 35 61 34 138 0.62 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA PF00004.24 132 2.5e-09 29.2 0.6 2 2 1.8e-05 0.00077 11.4 0.0 2 23 328 349 327 396 0.79 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_10 PF12846.2 304 2.9e-07 21.9 0.6 1 2 1.5e-05 0.00032 11.9 0.1 5 160 35 217 33 246 0.65 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_10 PF12846.2 304 2.9e-07 21.9 0.6 2 2 0.0003 0.0066 7.6 0.0 2 24 325 347 324 350 0.88 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_1 - 726 AAA_10 PF12846.2 304 3.9e-06 18.2 1.9 1 1 2.6e-06 5.6e-05 14.4 1.9 5 263 268 656 266 666 0.58 # 109 # 2286 # 1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.260 1_28 - 489 AAA_16 PF13191.1 185 9.2e-11 33.8 1.4 1 3 6.8e-05 0.003 9.3 0.0 27 52 34 61 28 100 0.73 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_16 PF13191.1 185 9.2e-11 33.8 1.4 2 3 0.025 1.1 0.9 1.4 48 130 172 249 159 284 0.53 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_16 PF13191.1 185 9.2e-11 33.8 1.4 3 3 4.2e-08 1.8e-06 19.8 0.0 12 51 313 351 310 425 0.74 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_24 - 324 Epimerase PF01370.16 236 0.00013 13.1 0.1 1 1 4.1e-06 0.00018 12.7 0.1 1 39 152 191 152 247 0.82 # 21367 # 22338 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 2_7 - 548 Pyr_redox PF00070.22 80 5.6e-25 79.4 2.2 1 2 7.3e-05 0.0032 9.7 0.5 2 31 88 117 87 119 0.95 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 Pyr_redox PF00070.22 80 5.6e-25 79.4 2.2 2 2 2.9e-23 1.3e-21 68.7 0.1 1 72 252 323 252 334 0.93 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_24 - 324 NmrA PF05368.8 233 6e-06 17.4 0.6 1 1 3.2e-07 1.4e-05 16.1 0.6 1 52 152 205 152 264 0.90 # 21367 # 22338 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 1_26 - 204 HTH_23 PF13384.1 50 2.6e-09 28.4 0.4 1 1 2.5e-10 5.4e-09 27.3 0.1 4 39 162 197 159 201 0.89 # 23234 # 23845 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 4_1 - 225 HTH_23 PF13384.1 50 4e-05 15.0 3.8 1 1 5.4e-06 0.00012 13.5 0.7 28 41 41 54 40 69 0.93 # 43 # 717 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_28 - 489 DUF3584 PF12128.3 1201 0.025 3.5 24.7 1 3 0.0017 0.076 1.9 0.4 21 37 35 51 31 52 0.85 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 DUF3584 PF12128.3 1201 0.025 3.5 24.7 2 3 0.00069 0.03 3.2 13.9 350 531 184 275 155 316 0.49 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 DUF3584 PF12128.3 1201 0.025 3.5 24.7 3 3 0.00023 0.01 4.8 0.1 21 35 328 342 322 344 0.86 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 T2SE PF00437.15 272 1.6e-07 22.1 2.7 1 2 4.4e-06 0.00019 12.1 0.0 131 170 34 70 25 93 0.77 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 T2SE PF00437.15 272 1.6e-07 22.1 2.7 2 2 2.6e-05 0.0011 9.5 0.7 115 153 311 349 188 354 0.66 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_4 - 118 TIGR01068 TIGR01068 101 2.9e-08 25.3 0.1 1 1 9.8e-10 4.3e-08 24.8 0.1 12 63 44 95 23 98 0.91 # 1142 # 1495 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.384 1_28 - 489 PduV-EutP PF10662.4 143 7e-08 23.8 0.7 1 3 2e-05 0.00089 10.5 0.1 2 24 32 54 31 70 0.89 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 PduV-EutP PF10662.4 143 7e-08 23.8 0.7 2 3 0.049 2.2 -0.5 0.0 47 73 140 168 120 202 0.80 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 PduV-EutP PF10662.4 143 7e-08 23.8 0.7 3 3 5.5e-05 0.0024 9.1 0.0 2 23 325 346 324 364 0.88 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ATP-synt_ab PF00006.20 215 1.8e-06 19.3 0.1 1 2 3.9e-05 0.0017 9.6 0.0 16 44 32 60 28 271 0.89 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ATP-synt_ab PF00006.20 215 1.8e-06 19.3 0.1 2 2 0.00014 0.006 7.8 0.0 13 39 322 348 315 363 0.87 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_12 - 257 TIGR02168 TIGR02168 1181 1.7e-07 20.7 33.5 1 1 4.5e-09 2e-07 20.5 33.5 253 434 48 230 20 247 0.83 # 10165 # 10935 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.268 1_24 - 324 DapB_N PF01113.15 124 4.6e-06 18.3 0.2 1 2 0.042 1.9 0.2 0.0 92 103 121 132 115 142 0.84 # 21367 # 22338 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 1_24 - 324 DapB_N PF01113.15 124 4.6e-06 18.3 0.2 2 2 1.1e-06 4.8e-05 15.1 0.2 3 97 152 242 150 250 0.78 # 21367 # 22338 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 1_26 - 204 HTH_11 PF08279.7 55 0.00013 13.4 0.1 1 1 2e-05 0.00044 11.7 0.1 18 34 178 194 166 195 0.80 # 23234 # 23845 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_12 - 257 HTH_11 PF08279.7 55 0.00019 12.8 0.0 1 1 3.6e-05 0.0008 10.9 0.0 21 40 7 26 3 30 0.87 # 10165 # 10935 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.268 1_28 - 489 UPF0079 PF02367.12 123 9.6e-06 17.0 0.1 1 2 0.0011 0.047 5.1 0.1 18 40 34 56 21 64 0.82 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 UPF0079 PF02367.12 123 9.6e-06 17.0 0.1 2 2 5.4e-05 0.0024 9.3 0.0 6 41 315 351 310 375 0.83 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 NACHT PF05729.7 166 2.2e-12 38.7 0.0 1 2 6.5e-07 2.9e-05 15.5 0.0 3 33 34 64 32 137 0.72 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 NACHT PF05729.7 166 2.2e-12 38.7 0.0 2 2 1.4e-08 6e-07 21.0 0.0 3 71 327 392 325 435 0.83 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 4_1 - 225 Arg_repressor PF01316.16 70 8.1e-05 13.9 0.0 1 1 5.7e-06 0.00025 12.4 0.0 24 49 30 55 25 74 0.75 # 43 # 717 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 2_4 - 118 AhpC-TSA PF00578.16 124 7.9e-10 30.3 0.0 1 1 2.4e-11 1e-09 29.9 0.0 3 86 26 109 25 115 0.84 # 1142 # 1495 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.384 1_28 - 489 Septin PF00735.13 281 2.2e-05 15.3 2.1 1 3 0.00017 0.0074 7.0 0.1 7 38 34 64 29 102 0.75 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Septin PF00735.13 281 2.2e-05 15.3 2.1 2 3 0.075 3.3 -1.7 0.5 89 103 198 212 162 225 0.57 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 Septin PF00735.13 281 2.2e-05 15.3 2.1 3 3 0.00024 0.011 6.5 0.0 6 27 326 347 323 368 0.89 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_8 - 217 Sigma70_r3 PF04539.11 78 0.00014 13.5 0.1 1 1 8.2e-06 0.00036 12.2 0.1 23 43 42 62 37 67 0.90 # 4429 # 5079 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.531 1_28 - 489 TrwB_AAD_bind PF10412.4 386 1.2e-05 15.8 0.8 1 2 0.00015 0.0065 6.8 0.1 17 38 33 54 25 62 0.84 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TrwB_AAD_bind PF10412.4 386 1.2e-05 15.8 0.8 2 2 0.00015 0.0066 6.8 0.1 16 39 325 348 323 351 0.90 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 GTP_EFTU PF00009.22 188 1.4e-05 16.4 1.5 1 2 0.00051 0.022 5.9 0.0 5 33 33 61 30 84 0.77 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 GTP_EFTU PF00009.22 188 1.4e-05 16.4 1.5 2 2 7.5e-05 0.0033 8.6 0.0 5 37 326 358 324 386 0.81 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_26 - 204 HTH_28 PF13518.1 52 2e-08 25.9 0.1 1 1 2.6e-09 5.8e-08 24.5 0.1 4 34 167 197 166 198 0.94 # 23234 # 23845 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 4_1 - 225 HTH_28 PF13518.1 52 3.8e-05 15.5 0.4 1 1 8e-06 0.00018 13.3 0.4 15 36 31 54 17 55 0.80 # 43 # 717 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_12 - 257 HlyD PF00529.15 305 0.0044 8.0 14.0 1 1 0.00014 0.0062 7.5 14.0 43 137 106 202 94 228 0.78 # 10165 # 10935 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.268 1_24 - 324 ADH_zinc_N PF00107.21 130 2.2e-17 54.6 0.0 1 1 1.1e-18 4.9e-17 53.5 0.0 1 114 160 267 160 285 0.91 # 21367 # 22338 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 1_28 - 489 Dynamin_N PF00350.18 168 0.0087 7.6 18.7 1 1 0.00026 0.011 7.2 0.0 1 20 327 346 327 350 0.93 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_25 PF13481.1 194 5e-06 17.8 0.0 1 2 0.00019 0.0083 7.2 0.0 11 54 7 52 1 63 0.78 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_25 PF13481.1 194 5e-06 17.8 0.0 2 2 0.00012 0.0053 7.9 0.0 30 52 321 343 310 353 0.86 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 4_1 - 225 HTH_Tnp_4 PF13613.1 53 0.00014 13.2 0.4 1 1 1.1e-05 0.00047 11.5 0.4 30 49 41 60 18 63 0.84 # 43 # 717 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 2_7 - 548 HI0933_like PF03486.9 409 8.3e-09 26.0 4.6 1 3 3.4e-06 0.00015 12.0 1.4 1 34 86 119 86 127 0.89 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 HI0933_like PF03486.9 409 8.3e-09 26.0 4.6 2 3 0.052 2.3 -1.8 0.0 144 165 203 223 195 230 0.80 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 HI0933_like PF03486.9 409 8.3e-09 26.0 4.6 3 3 9.3e-07 4.1e-05 13.9 0.0 75 165 258 349 239 354 0.82 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 cobW PF02492.14 178 4.4e-07 21.2 0.1 1 2 4.6e-05 0.002 9.3 0.1 4 25 35 56 33 86 0.78 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 cobW PF02492.14 178 4.4e-07 21.2 0.1 2 2 5.9e-05 0.0026 9.0 0.0 4 22 328 346 326 360 0.82 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 MMR_HSR1 PF01926.18 116 1.2e-09 29.9 1.5 1 2 3.2e-07 1.4e-05 16.8 0.2 1 91 33 159 33 191 0.72 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 MMR_HSR1 PF01926.18 116 1.2e-09 29.9 1.5 2 2 3.9e-05 0.0017 10.1 0.0 2 21 327 346 326 359 0.87 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_24 - 324 NAD_binding_10 PF13460.1 183 8.6e-06 17.6 0.1 1 1 2.8e-07 1.2e-05 17.1 0.1 1 38 152 192 152 222 0.86 # 21367 # 22338 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 2_3 - 136 MerR_1 PF13411.1 69 7.5e-23 71.9 2.6 1 2 1.8e-24 8e-23 71.9 0.1 1 64 3 67 3 70 0.96 # 718 # 1125 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 2_3 - 136 MerR_1 PF13411.1 69 7.5e-23 71.9 2.6 2 2 0.056 2.5 -0.2 0.5 41 54 95 108 94 112 0.82 # 718 # 1125 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_26 - 204 CENP-B_N PF04218.8 53 2.2e-08 25.2 2.8 1 2 0.00037 0.016 6.5 0.2 13 35 117 139 115 142 0.85 # 23234 # 23845 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_26 - 204 CENP-B_N PF04218.8 53 2.2e-08 25.2 2.8 2 2 5e-08 2.2e-06 18.8 0.2 14 46 167 199 166 200 0.92 # 23234 # 23845 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ABC_ATPase PF09818.4 448 0.015 5.5 13.2 1 3 0.00097 0.043 4.0 0.2 249 266 36 53 32 57 0.82 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ABC_ATPase PF09818.4 448 0.015 5.5 13.2 2 3 0.043 1.9 -1.4 0.0 319 349 99 129 96 132 0.89 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ABC_ATPase PF09818.4 448 0.015 5.5 13.2 3 3 0.00013 0.0055 7.0 0.1 242 265 321 345 315 350 0.82 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 NTPase_1 PF03266.10 168 2.1e-06 19.3 1.6 1 2 0.00025 0.011 7.2 0.8 2 26 34 58 33 66 0.84 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 NTPase_1 PF03266.10 168 2.1e-06 19.3 1.6 2 2 3.2e-05 0.0014 10.1 0.0 2 24 327 349 326 355 0.87 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_7 - 206 Virul_fac_BrkB PF03631.10 260 0.0019 9.2 23.5 1 2 7.7e-06 0.00034 11.7 7.6 166 235 11 79 1 81 0.84 # 6544 # 7161 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.273 1_7 - 206 Virul_fac_BrkB PF03631.10 260 0.0019 9.2 23.5 2 2 0.0021 0.094 3.7 8.0 115 180 135 191 107 193 0.63 # 6544 # 7161 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.273 2_7 - 548 GIDA PF01134.17 392 1.7e-06 18.8 5.2 1 3 3.9e-08 1.7e-06 18.8 5.2 1 150 87 222 87 255 0.69 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 GIDA PF01134.17 392 1.7e-06 18.8 5.2 2 3 0.012 0.51 0.8 0.8 98 170 294 369 285 385 0.57 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 548 GIDA PF01134.17 392 1.7e-06 18.8 5.2 3 3 0.019 0.85 0.0 0.1 346 384 371 410 366 417 0.67 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_4 - 118 SCO1-SenC PF02630.9 174 2.2e-08 25.6 0.0 1 1 6.2e-10 2.7e-08 25.3 0.0 33 113 29 103 5 108 0.79 # 1142 # 1495 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.384 1_28 - 489 TIGR00235 TIGR00235 207 2.6e-07 21.9 0.0 1 2 0.00024 0.011 6.8 0.0 9 45 34 72 29 86 0.73 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 TIGR00235 TIGR00235 207 2.6e-07 21.9 0.0 2 2 4.2e-06 0.00019 12.6 0.0 9 60 327 378 321 453 0.81 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_4 - 118 Thioredoxin PF00085.15 104 5.2e-08 24.3 0.0 1 1 1.8e-09 7.9e-08 23.7 0.0 17 67 45 95 30 98 0.90 # 1142 # 1495 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.384 1_28 - 489 FeoB_N PF02421.13 156 3.9e-06 18.0 0.6 1 2 8.7e-05 0.0038 8.2 0.1 2 23 33 54 32 61 0.90 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 FeoB_N PF02421.13 156 3.9e-06 18.0 0.6 2 2 0.00014 0.0061 7.6 0.0 2 21 326 345 325 357 0.89 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_4 - 118 Thioredoxin_7 PF13899.1 82 1.8e-07 22.9 0.0 1 1 6.9e-09 3.1e-07 22.2 0.0 16 77 45 110 41 113 0.71 # 1142 # 1495 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.384 1_25 - 140 Fe_dep_repress PF01325.14 60 0.00018 13.2 0.0 1 1 7.1e-06 0.00031 12.5 0.0 24 53 49 78 44 83 0.87 # 22462 # 22881 # 1 # ID=1_25;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.264 1_28 - 489 AFG1_ATPase PF03969.11 362 3.4e-05 14.4 10.4 1 3 0.0014 0.062 3.7 0.0 67 135 36 128 28 141 0.66 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AFG1_ATPase PF03969.11 362 3.4e-05 14.4 10.4 2 3 0.066 2.9 -1.8 8.1 5 49 186 230 183 253 0.71 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AFG1_ATPase PF03969.11 362 3.4e-05 14.4 10.4 3 3 1.2e-05 0.00052 10.6 0.0 47 88 308 350 265 383 0.80 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 2_4 - 118 Redoxin PF08534.5 146 8.5e-08 23.6 0.0 1 1 2.4e-09 1.1e-07 23.3 0.0 16 82 36 98 23 111 0.77 # 1142 # 1495 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.384 4_1 - 225 rve PF00665.21 120 8e-18 56.5 0.5 1 2 0.041 1.8 0.5 0.0 83 102 30 49 12 52 0.89 # 43 # 717 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 4_1 - 225 rve PF00665.21 120 8e-18 56.5 0.5 2 2 1.2e-18 5.3e-17 53.8 0.3 2 117 66 174 65 176 0.93 # 43 # 717 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_28 - 489 MobB PF03205.9 140 3.6e-08 25.0 0.8 1 2 2e-05 0.0009 10.7 0.2 3 28 34 59 33 70 0.84 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 MobB PF03205.9 140 3.6e-08 25.0 0.8 2 2 9.6e-06 0.00042 11.8 0.0 3 24 327 348 325 357 0.87 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_26 - 204 HTH_38 PF13936.1 44 1.2e-05 16.6 2.1 1 2 0.081 3.6 -0.9 0.2 6 20 121 135 114 140 0.57 # 23234 # 23845 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_26 - 204 HTH_38 PF13936.1 44 1.2e-05 16.6 2.1 2 2 4.2e-07 1.8e-05 16.0 0.2 15 39 170 194 160 195 0.93 # 23234 # 23845 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_26 - 204 Sigma70_r4 PF04545.11 50 8.1e-05 13.7 0.1 1 1 4.2e-06 0.00018 12.6 0.1 9 41 160 196 157 198 0.92 # 23234 # 23845 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_25 - 140 HTH_27 PF13463.1 68 2.5e-10 32.4 0.0 1 1 7.7e-12 3.4e-10 31.9 0.0 1 67 31 96 31 97 0.90 # 22462 # 22881 # 1 # ID=1_25;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.264 1_26 - 204 HTH_Tnp_IS630 PF01710.11 120 5.9e-05 14.5 0.1 1 1 3.6e-06 0.00016 13.1 0.1 9 41 166 198 162 203 0.88 # 23234 # 23845 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 2_7 - 548 TIGR03140 TIGR03140 515 7.9e-18 55.6 4.9 1 1 6e-18 2.6e-16 50.6 4.7 198 501 71 403 65 414 0.69 # 2704 # 4347 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_28 - 489 ABC_tran_2 PF12848.2 85 6.4e-10 30.6 27.4 1 2 5.8e-09 2.6e-07 22.2 18.7 4 65 174 235 172 238 0.97 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ABC_tran_2 PF12848.2 85 6.4e-10 30.6 27.4 2 2 4.3e-06 0.00019 13.1 1.5 54 84 255 284 242 285 0.75 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_7 - 206 Cad PF03596.8 191 2.6e-85 276.7 16.4 1 1 6.7e-87 2.9e-85 276.5 16.4 1 191 12 203 12 203 0.99 # 6544 # 7161 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.273 2_8 - 217 HTH_15 PF12324.3 77 5.4e-36 114.0 0.1 1 1 2.4e-37 1e-35 113.0 0.0 1 77 3 78 3 78 0.98 # 4429 # 5079 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.531 1_26 - 204 HTH_40 PF14493.1 91 1.4e-05 17.0 0.9 1 2 0.015 0.66 2.1 0.1 24 57 94 127 72 147 0.76 # 23234 # 23845 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_26 - 204 HTH_40 PF14493.1 91 1.4e-05 17.0 0.9 2 2 5.7e-06 0.00025 13.1 0.1 7 31 169 193 165 194 0.92 # 23234 # 23845 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 1_26 - 204 HTH_3 PF01381.17 55 0.00034 12.3 0.6 1 1 1.4e-05 0.00061 11.4 0.1 13 33 179 199 171 201 0.88 # 23234 # 23845 # -1 # ID=1_26;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314 4_1 - 225 DDE_3 PF13358.1 146 3.6e-05 15.3 0.2 1 1 1.3e-06 5.9e-05 14.6 0.2 26 94 74 140 50 203 0.78 # 43 # 717 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 4_1 - 225 DDE_Tnp_IS66 PF03050.9 271 2.9e-07 21.7 3.3 1 2 1.7e-08 7.7e-07 20.3 0.9 16 97 21 96 7 134 0.76 # 43 # 717 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 4_1 - 225 DDE_Tnp_IS66 PF03050.9 271 2.9e-07 21.7 3.3 2 2 0.008 0.35 1.7 0.1 243 264 163 184 156 190 0.81 # 43 # 717 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_25 - 140 TrmB PF01978.14 68 3.6e-07 21.6 0.0 1 1 2.4e-08 1e-06 20.2 0.0 1 58 26 83 25 98 0.92 # 22462 # 22881 # 1 # ID=1_25;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.264 2_4 - 118 Thioredoxin_8 PF13905.1 95 1.3e-11 36.3 0.1 1 1 4.8e-13 2.1e-11 35.6 0.1 2 64 47 110 45 113 0.90 # 1142 # 1495 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.384 1_28 - 489 ABC_tran PF00005.22 137 7.1e-41 131.5 12.1 1 4 1.3e-12 5.6e-11 34.7 0.3 8 44 28 64 21 85 0.84 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ABC_tran PF00005.22 137 7.1e-41 131.5 12.1 2 4 3.7e-10 1.6e-08 26.7 0.0 105 137 99 131 69 131 0.83 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ABC_tran PF00005.22 137 7.1e-41 131.5 12.1 3 4 0.0022 0.097 4.7 2.3 38 92 174 271 161 306 0.67 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 ABC_tran PF00005.22 137 7.1e-41 131.5 12.1 4 4 6.8e-23 3e-21 67.9 0.1 1 137 314 438 314 438 0.75 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_17 - 100 zf-DHHC PF01529.15 174 0.023 5.8 8.3 1 1 0.00065 0.028 5.5 8.3 101 167 13 79 4 96 0.69 # 13105 # 13404 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 1_28 - 489 SMC_N PF02463.14 220 1.6e-13 42.1 10.5 1 4 0.00069 0.031 5.2 0.0 26 44 33 51 14 54 0.76 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 SMC_N PF02463.14 220 1.6e-13 42.1 10.5 2 4 2.6e-06 0.00011 13.1 0.0 133 208 99 169 67 179 0.81 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 SMC_N PF02463.14 220 1.6e-13 42.1 10.5 3 4 4.9e-06 0.00021 12.3 0.0 24 46 325 346 306 375 0.81 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 SMC_N PF02463.14 220 1.6e-13 42.1 10.5 4 4 3.9e-07 1.7e-05 15.9 0.1 110 186 377 455 363 480 0.79 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_29 PF13555.1 62 3.7e-11 34.2 0.0 1 2 1e-05 0.00045 11.5 0.0 25 41 33 49 22 53 0.82 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_29 PF13555.1 62 3.7e-11 34.2 0.0 2 2 2.8e-08 1.3e-06 19.7 0.0 17 43 319 344 312 347 0.84 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_28 PF13521.1 163 3.8e-13 41.4 0.6 1 3 3.2e-08 1.4e-06 20.1 0.0 1 28 33 66 33 86 0.79 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_28 PF13521.1 163 3.8e-13 41.4 0.6 2 3 0.08 3.5 -0.7 0.5 63 69 196 202 161 245 0.55 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_28 PF13521.1 163 3.8e-13 41.4 0.6 3 3 1.7e-07 7.5e-06 17.7 0.0 1 43 326 370 326 405 0.80 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 RuvB_N PF05496.7 234 0.00022 12.0 0.1 1 2 0.00027 0.012 6.3 0.0 51 75 32 56 22 67 0.87 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 RuvB_N PF05496.7 234 0.00022 12.0 0.1 2 2 0.0034 0.15 2.8 0.0 53 74 327 348 320 358 0.86 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_11 - 315 RepA_N PF06970.6 76 2.6e-35 111.9 4.9 1 1 1.8e-36 7.8e-35 110.4 4.9 1 76 15 90 15 90 0.99 # 8777 # 9721 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.279 1_28 - 489 AAA_5 PF07728.9 139 3.7e-07 21.7 5.7 1 2 0.00013 0.0057 8.2 0.0 3 25 35 57 33 86 0.84 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 AAA_5 PF07728.9 139 3.7e-07 21.7 5.7 2 2 2.7e-06 0.00012 13.6 0.0 2 43 327 372 326 454 0.86 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_7 - 206 Sdh_cyt PF01127.17 121 0.0012 10.4 15.6 1 2 0.00031 0.014 7.0 1.9 35 120 13 117 2 118 0.59 # 6544 # 7161 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.273 1_7 - 206 Sdh_cyt PF01127.17 121 0.0012 10.4 15.6 2 2 0.001 0.044 5.4 6.2 33 78 144 189 129 192 0.52 # 6544 # 7161 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.273 4_1 - 225 HTH_32 PF13565.1 77 3.5e-08 26.0 0.6 1 2 3.2e-07 1.4e-05 17.6 0.1 49 76 26 50 11 51 0.86 # 43 # 717 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 4_1 - 225 HTH_32 PF13565.1 77 3.5e-08 26.0 0.6 2 2 0.0011 0.047 6.3 0.0 30 63 138 171 99 183 0.73 # 43 # 717 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_28 - 489 RNA_helicase PF00910.17 107 9.6e-07 20.8 2.0 1 3 0.0003 0.013 7.5 0.0 2 23 35 56 34 76 0.83 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 RNA_helicase PF00910.17 107 9.6e-07 20.8 2.0 2 3 0.058 2.5 0.1 0.6 18 98 161 241 158 247 0.63 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 1_28 - 489 RNA_helicase PF00910.17 107 9.6e-07 20.8 2.0 3 3 4.3e-05 0.0019 10.2 0.0 1 38 327 364 327 373 0.85 # 25329 # 26795 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.314 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/140399d7-a19d-4e00-8166-8a2a68513daa # Target file: checkm_output/bins/pGCA_002633805.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002633805.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/140399d7-a19d-4e00-8166-8a2a68513daa checkm_output/bins/pGCA_002633805.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/Staphylococcus/training_20210111 # Date: Mon Jan 11 14:55:37 2021 # [ok]