# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 3_10 - 235 RepL PF05732.6 165 7.4e-05 14.2 0.0 1 1 2.3e-06 0.00014 13.3 0.0 76 111 32 67 3 72 0.81 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 3_6 - 797 TIGR00963 TIGR00963 787 3.9e-207 681.9 29.2 1 2 2.9e-176 1.7e-174 573.9 4.4 1 473 24 500 24 503 0.97 # 6858 # 9248 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.307 3_6 - 797 TIGR00963 TIGR00963 787 3.9e-207 681.9 29.2 2 2 1.4e-37 8.6e-36 115.2 16.6 511 784 501 767 499 771 0.78 # 6858 # 9248 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.307 2_11 - 162 GerE PF00196.14 58 5e-06 18.0 0.2 1 1 6.4e-07 1.3e-05 16.7 0.2 19 49 2 32 2 34 0.93 # 8840 # 9325 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.233 3_12 - 203 GerE PF00196.14 58 0.00019 13.0 0.1 1 1 1.9e-05 0.00038 12.0 0.1 11 35 168 192 166 197 0.93 # 15403 # 16011 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.315 2_17 - 204 GerE PF00196.14 58 0.00019 13.0 0.1 1 1 2e-05 0.00041 11.9 0.1 11 35 168 192 166 196 0.94 # 14207 # 14818 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 2_14 - 586 Peptidase_M56 PF05569.6 299 2.2e-94 307.9 14.0 1 1 3.6e-96 2.2e-94 307.9 14.0 2 299 4 298 3 298 0.99 # 11108 # 12865 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.261 4_8 - 264 ArsA_ATPase PF02374.10 305 6.1e-11 34.0 0.3 1 1 2.4e-12 1.5e-10 32.8 0.3 3 137 3 134 1 137 0.70 # 7833 # 8624 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 4_8 - 264 AAA_18 PF13238.1 129 0.00017 14.2 0.0 1 1 8.9e-06 0.00054 12.5 0.0 8 103 12 134 11 138 0.71 # 7833 # 8624 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 3_10 - 235 MarR_2 PF12802.2 62 4.1e-10 31.5 0.2 1 1 1.4e-09 2.1e-08 26.0 0.0 7 54 19 64 16 69 0.88 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 2_16 - 193 MarR_2 PF12802.2 62 2.2e-05 16.4 0.0 1 2 0.018 0.28 3.2 0.1 23 45 112 134 75 137 0.90 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 2_16 - 193 MarR_2 PF12802.2 62 2.2e-05 16.4 0.0 2 2 7.4e-05 0.0011 10.9 0.0 7 45 149 184 144 187 0.90 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 3_11 - 193 MarR_2 PF12802.2 62 2.8e-05 16.0 0.0 1 2 0.019 0.29 3.2 0.1 23 45 112 134 78 137 0.90 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 3_11 - 193 MarR_2 PF12802.2 62 2.8e-05 16.0 0.0 2 2 9.1e-05 0.0014 10.6 0.0 7 45 149 184 144 187 0.89 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 2_11 - 162 MarR_2 PF12802.2 62 0.00064 11.6 0.0 1 1 6.7e-05 0.001 11.0 0.0 23 45 3 25 1 27 0.94 # 8840 # 9325 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.233 1_13 - 462 Na_H_antiporter PF03553.9 303 1.3e-50 164.3 52.6 1 2 4.5e-09 2.8e-07 22.0 20.5 112 264 27 177 9 177 0.84 # 13515 # 14900 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.291 1_13 - 462 Na_H_antiporter PF03553.9 303 1.3e-50 164.3 52.6 2 2 5.9e-50 3.6e-48 156.3 24.1 1 301 163 453 163 454 0.96 # 13515 # 14900 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.291 2_9 - 102 GST_N_3 PF13417.1 75 2.1e-05 17.0 0.0 1 1 4.4e-07 2.7e-05 16.6 0.0 1 51 19 70 19 78 0.91 # 7190 # 7495 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.255 4_8 - 264 YhjQ PF06564.7 244 3.8e-12 38.2 0.0 1 1 8.3e-14 5.1e-12 37.8 0.0 1 152 1 159 1 165 0.85 # 7833 # 8624 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 1_5 - 230 HTH_Crp_2 PF13545.1 76 7.8e-09 27.5 0.1 1 1 1.4e-09 4.3e-08 25.1 0.3 2 68 163 228 162 229 0.89 # 3717 # 4406 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.238 3_10 - 235 HTH_Crp_2 PF13545.1 76 2.6e-06 19.4 0.0 1 1 2.9e-07 8.7e-06 17.8 0.1 29 63 32 66 17 83 0.90 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 2_11 - 162 HTH_17 PF12728.2 51 5.3e-06 18.9 0.0 1 1 1.8e-07 1.1e-05 17.9 0.0 3 24 3 24 3 49 0.75 # 8840 # 9325 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.233 1_8 - 150 HTH_33 PF13592.1 60 0.00025 12.8 0.1 1 1 8.4e-06 0.00051 11.8 0.1 8 34 23 49 16 53 0.90 # 7453 # 7902 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.253 1_1 - 401 DcuC PF03606.10 465 4.1e-152 498.8 33.9 1 1 1.5e-153 4.6e-152 498.6 33.9 70 464 1 396 1 397 0.99 # 65 # 1267 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 1_2 - 81 DcuC PF03606.10 465 1e-10 32.5 0.1 1 1 3.6e-12 1.1e-10 32.5 0.1 1 33 21 59 21 79 0.78 # 1387 # 1629 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.366 3_12 - 203 Sigma70_r4_2 PF08281.7 54 0.00055 11.7 0.9 1 1 4.9e-05 0.0015 10.3 0.2 14 44 164 193 163 194 0.91 # 15403 # 16011 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.315 3_11 - 193 Sigma70_r4_2 PF08281.7 54 0.00055 11.7 0.0 1 1 3.3e-05 0.001 10.8 0.0 10 48 144 182 143 183 0.86 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 3_11 - 193 Mga PF05043.8 87 2.9e-07 23.0 0.6 1 2 0.014 0.43 3.2 0.1 24 52 104 132 74 137 0.83 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 3_11 - 193 Mga PF05043.8 87 2.9e-07 23.0 0.6 2 2 3.7e-07 1.1e-05 17.9 0.1 16 56 147 186 143 187 0.94 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 2_16 - 193 Mga PF05043.8 87 1.2e-06 21.0 0.4 1 2 0.015 0.47 3.1 0.1 24 52 104 132 83 137 0.82 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 2_16 - 193 Mga PF05043.8 87 1.2e-06 21.0 0.4 2 2 1.8e-06 5.3e-05 15.7 0.0 18 56 149 186 144 187 0.92 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 2_11 - 162 MerR PF00376.18 38 3.4e-05 15.6 0.0 1 1 9.5e-07 5.8e-05 14.9 0.0 1 18 3 20 3 21 0.96 # 8840 # 9325 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.233 3_11 - 193 HTH_22 PF13309.1 64 6.7e-08 24.5 0.4 1 1 1.2e-07 1.5e-06 20.2 0.1 12 64 136 182 128 182 0.82 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 2_16 - 193 HTH_22 PF13309.1 64 2.9e-07 22.4 0.2 1 1 3.3e-07 4.1e-06 18.8 0.1 27 64 150 182 129 182 0.73 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 2_17 - 204 HTH_22 PF13309.1 64 7e-07 21.2 1.8 1 2 0.0045 0.055 5.5 0.2 3 41 109 147 107 149 0.93 # 14207 # 14818 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 2_17 - 204 HTH_22 PF13309.1 64 7e-07 21.2 1.8 2 2 1.4e-05 0.00017 13.6 0.0 43 61 176 194 171 195 0.94 # 14207 # 14818 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 3_12 - 203 HTH_22 PF13309.1 64 2.3e-06 19.6 1.5 1 2 0.0048 0.058 5.5 0.2 3 41 109 147 107 149 0.93 # 15403 # 16011 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.315 3_12 - 203 HTH_22 PF13309.1 64 2.3e-06 19.6 1.5 2 2 4.8e-05 0.00058 11.9 0.0 43 61 176 194 172 195 0.94 # 15403 # 16011 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.315 2_11 - 162 HTH_22 PF13309.1 64 0.00044 12.2 3.7 1 1 0.00013 0.0016 10.5 0.0 43 64 2 23 1 23 0.91 # 8840 # 9325 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.233 2_7 - 796 Ribosomal_S13 PF00416.17 107 0.0012 11.5 3.7 1 2 0.0031 0.19 4.5 0.2 11 55 89 135 79 162 0.72 # 4368 # 6755 # -1 # ID=2_7;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 2_7 - 796 Ribosomal_S13 PF00416.17 107 0.0012 11.5 3.7 2 2 0.00046 0.028 7.2 0.5 5 60 627 681 623 708 0.85 # 4368 # 6755 # -1 # ID=2_7;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 1_10 - 225 MULE PF10551.4 93 0.00023 13.5 0.0 1 1 1.6e-05 0.00047 12.6 0.0 19 77 92 147 64 161 0.84 # 8767 # 9441 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.338 2_18 - 225 MULE PF10551.4 93 0.00038 12.9 0.0 1 1 2.7e-05 0.00083 11.8 0.0 19 77 92 147 63 161 0.83 # 15028 # 15702 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.345 2_18 - 225 HEM4 PF02602.10 231 0.00028 12.3 0.0 1 1 1.6e-05 0.00048 11.6 0.0 125 154 24 53 8 70 0.79 # 15028 # 15702 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.345 1_10 - 225 HEM4 PF02602.10 231 0.0004 11.9 0.1 1 1 2.2e-05 0.00068 11.1 0.1 127 154 26 53 10 70 0.78 # 8767 # 9441 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.338 3_7 - 504 Glycos_transf_1 PF00534.15 172 1.2e-23 75.6 0.3 1 1 6.6e-25 4e-23 73.9 0.2 18 155 323 458 312 475 0.93 # 9266 # 10777 # 1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 1_16 - 311 HTH_36 PF13730.1 55 2e-07 23.3 0.9 1 1 4.6e-08 5.6e-07 21.9 0.9 2 54 32 95 31 96 0.86 # 17826 # 18758 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.277 4_7 - 337 HTH_36 PF13730.1 55 6.9e-07 21.6 1.0 1 1 1.6e-07 2e-06 20.1 1.0 2 55 26 76 25 76 0.88 # 6251 # 7261 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.263 3_11 - 193 HTH_36 PF13730.1 55 0.00016 14.0 0.1 1 1 2.8e-05 0.00034 13.0 0.1 28 49 163 184 145 186 0.93 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 2_16 - 193 HTH_36 PF13730.1 55 0.00016 14.0 0.2 1 1 2.7e-05 0.00033 13.0 0.2 28 49 163 184 144 186 0.92 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 3_10 - 235 HTH_36 PF13730.1 55 0.00027 13.3 0.1 1 1 0.00015 0.0018 10.7 0.0 27 55 33 61 20 61 0.85 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 2_7 - 796 Hydrolase PF00702.21 215 3.8e-58 189.6 6.5 1 1 1.1e-59 6.9e-58 188.7 6.5 1 215 490 702 490 702 0.95 # 4368 # 6755 # -1 # ID=2_7;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 2_15 - 127 Penicillinase_R PF03965.11 115 2.3e-37 119.8 1.3 1 1 4.3e-39 2.6e-37 119.7 1.3 1 114 8 121 8 122 0.99 # 12855 # 13235 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.249 3_2 - 398 TIGR00967 TIGR00967 414 7.7e-40 128.8 31.0 1 1 1.9e-41 1.1e-39 128.3 31.0 2 409 12 385 11 390 0.81 # 2028 # 3221 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.266 3_6 - 797 Helicase_C PF00271.26 78 3.4e-05 15.9 0.0 1 1 1.9e-06 0.00011 14.2 0.0 34 78 482 534 430 534 0.86 # 6858 # 9248 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.307 3_10 - 235 RNA_pol_Rpc34 PF05158.7 327 0.00037 11.9 0.2 1 1 1.5e-05 0.00094 10.6 0.2 22 89 27 94 6 144 0.78 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 2_4 - 176 Acetyltransf_4 PF13420.1 155 7.5e-21 66.9 0.6 1 1 1.5e-22 9.1e-21 66.6 0.6 4 152 7 163 5 165 0.85 # 2685 # 3212 # -1 # ID=2_4;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.265 4_8 - 264 AAA_31 PF13614.1 157 2.3e-16 52.3 0.4 1 1 1e-17 6.2e-16 50.9 0.4 2 150 3 156 2 163 0.81 # 7833 # 8624 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 2_18 - 225 AAA_17 PF13207.1 121 2.4e-06 20.6 1.0 1 1 1.7e-07 3.4e-06 20.1 1.0 23 113 24 122 20 206 0.85 # 15028 # 15702 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.345 1_10 - 225 AAA_17 PF13207.1 121 7.6e-06 19.0 1.1 1 1 5.5e-07 1.1e-05 18.5 1.1 23 113 24 122 20 205 0.84 # 8767 # 9441 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.338 4_8 - 264 AAA_17 PF13207.1 121 0.00041 13.4 0.4 1 1 6.6e-05 0.0013 11.8 0.1 9 64 12 71 10 149 0.52 # 7833 # 8624 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 4_4 - 178 DDE_Tnp_1_6 PF13751.1 125 1.1e-10 33.8 1.8 1 1 2.6e-12 1.6e-10 33.3 1.8 1 74 87 162 87 171 0.82 # 4545 # 5078 # -1 # ID=4_4;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.279 2_9 - 102 ArsC PF03960.10 110 3.8e-05 16.0 0.4 1 1 1e-06 6.3e-05 15.3 0.3 1 41 20 60 20 65 0.90 # 7190 # 7495 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.255 1_14 - 418 tRNA-synt_1b PF00579.20 292 4.3e-86 280.8 0.0 1 1 8.9e-88 5.5e-86 280.4 0.0 3 292 28 322 26 322 0.97 # 15216 # 16469 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.303 3_2 - 398 FUSC PF04632.7 650 0.00077 10.1 2.6 1 1 2.2e-05 0.0013 9.3 2.6 405 488 118 200 94 209 0.77 # 2028 # 3221 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.266 3_10 - 235 HTH_34 PF13601.1 80 1.2e-05 17.5 0.3 1 2 7e-06 0.00043 12.6 0.0 2 48 19 65 18 73 0.91 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 3_10 - 235 HTH_34 PF13601.1 80 1.2e-05 17.5 0.3 2 2 0.017 1.1 1.7 0.0 28 46 118 137 97 150 0.74 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 3_12 - 203 HTH_29 PF13551.1 112 1e-06 21.1 0.2 1 1 1e-06 1e-05 17.9 0.0 4 34 168 197 166 200 0.92 # 15403 # 16011 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.315 2_17 - 204 HTH_29 PF13551.1 112 2.6e-06 19.8 0.2 1 1 1.7e-06 1.8e-05 17.1 0.0 4 34 168 197 166 201 0.91 # 14207 # 14818 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 3_11 - 193 HTH_29 PF13551.1 112 4.7e-06 19.0 0.9 1 2 0.054 0.55 2.7 0.2 32 69 121 156 118 159 0.73 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 3_11 - 193 HTH_29 PF13551.1 112 4.7e-06 19.0 0.9 2 2 9.2e-06 9.4e-05 14.8 0.0 7 39 156 187 151 190 0.91 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 2_16 - 193 HTH_29 PF13551.1 112 8.8e-06 18.1 0.4 1 1 9.8e-06 0.0001 14.7 0.0 7 39 156 187 152 190 0.91 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 3_10 - 235 HTH_29 PF13551.1 112 0.00011 14.6 0.0 1 1 1.8e-05 0.00018 13.9 0.0 2 70 20 86 19 96 0.76 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 1_10 - 225 HTH_29 PF13551.1 112 0.00042 12.7 0.3 1 1 0.00033 0.0034 9.8 0.1 14 37 30 55 20 78 0.76 # 8767 # 9441 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.338 3_10 - 235 MarR PF01047.17 59 4e-10 31.6 0.4 1 2 3.7e-10 7.6e-09 27.5 0.1 4 48 18 62 16 66 0.93 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 3_10 - 235 MarR PF01047.17 59 4e-10 31.6 0.4 2 2 0.044 0.9 1.6 0.0 36 51 124 139 123 142 0.83 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 2_15 - 127 MarR PF01047.17 59 9.3e-09 27.2 0.1 1 1 8e-10 1.6e-08 26.4 0.1 1 54 8 65 8 65 0.97 # 12855 # 13235 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.249 3_11 - 193 MarR PF01047.17 59 0.00038 12.4 0.1 1 1 4.9e-05 0.001 11.1 0.0 1 41 145 184 145 188 0.89 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 7_1 - 80 RecR PF02132.10 41 0.00089 11.0 1.0 1 2 0.0013 0.076 4.8 0.0 2 17 28 43 27 46 0.81 # 3 # 242 # 1 # ID=7_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 7_1 - 80 RecR PF02132.10 41 0.00089 11.0 1.0 2 2 0.0021 0.13 4.0 0.1 2 15 62 75 61 79 0.76 # 3 # 242 # 1 # ID=7_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492 3_10 - 235 HTH_20 PF12840.2 61 1.7e-13 42.5 0.1 1 1 1.2e-14 3.7e-13 41.4 0.1 2 61 9 68 8 68 0.96 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 2_11 - 162 HTH_20 PF12840.2 61 1.1e-05 17.5 0.0 1 1 6.1e-07 1.8e-05 16.7 0.0 26 48 3 25 2 27 0.94 # 8840 # 9325 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.233 3_11 - 193 RuvB_C PF05491.8 76 0.00039 12.3 0.4 1 2 0.038 2.3 0.2 0.1 55 67 121 133 117 139 0.82 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 3_11 - 193 RuvB_C PF05491.8 76 0.00039 12.3 0.4 2 2 8.6e-05 0.0052 8.7 0.0 6 43 145 178 142 182 0.86 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 3_10 - 235 HTH_5 PF01022.15 47 4.1e-09 28.3 0.3 1 1 2.6e-09 4e-08 25.1 0.2 1 45 16 61 16 63 0.93 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 2_11 - 162 HTH_5 PF01022.15 47 2.8e-05 16.0 0.2 1 1 3.7e-06 5.6e-05 15.0 0.2 16 39 2 25 1 27 0.95 # 8840 # 9325 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.233 3_11 - 193 HTH_5 PF01022.15 47 0.00023 13.1 0.0 1 1 2.9e-05 0.00043 12.2 0.0 5 42 150 187 147 188 0.86 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 2_16 - 193 HTH_5 PF01022.15 47 0.00058 11.8 0.0 1 1 7.5e-05 0.0011 10.8 0.0 19 42 164 187 150 188 0.83 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 3_11 - 193 Terminase_5 PF06056.7 58 0.0004 12.2 0.1 1 1 2.5e-05 0.00076 11.3 0.1 7 36 154 183 153 189 0.91 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 2_16 - 193 Terminase_5 PF06056.7 58 0.0004 12.2 0.1 1 1 2.5e-05 0.00076 11.3 0.1 7 36 154 183 153 189 0.91 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 2_4 - 176 Acetyltransf_3 PF13302.1 142 6.5e-19 60.7 0.0 1 1 1.3e-20 7.8e-19 60.5 0.0 6 141 6 145 2 146 0.88 # 2685 # 3212 # -1 # ID=2_4;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.265 2_4 - 176 FR47 PF08445.5 86 4e-07 22.0 0.0 1 1 1.1e-08 6.9e-07 21.2 0.0 23 80 88 148 74 154 0.84 # 2685 # 3212 # -1 # ID=2_4;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.265 3_11 - 193 HTH_24 PF13412.1 48 4.6e-10 31.0 0.2 1 1 5.4e-11 8.2e-10 30.2 0.2 1 41 145 184 145 188 0.96 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 3_10 - 235 HTH_24 PF13412.1 48 4.2e-09 28.0 2.1 1 2 1.3e-08 2e-07 22.6 0.1 18 47 32 61 30 62 0.94 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 3_10 - 235 HTH_24 PF13412.1 48 4.2e-09 28.0 2.1 2 2 0.021 0.32 2.7 0.1 38 48 126 136 124 136 0.88 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 2_16 - 193 HTH_24 PF13412.1 48 1.2e-08 26.5 0.2 1 1 1.4e-09 2.1e-08 25.7 0.2 1 41 145 184 145 188 0.95 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 2_11 - 162 HTH_24 PF13412.1 48 4.8e-05 15.0 0.1 1 1 1.4e-05 0.00021 12.9 0.0 19 41 3 25 2 25 0.95 # 8840 # 9325 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.233 3_11 - 193 HTH_AsnC-type PF13404.1 42 0.00022 13.0 0.0 1 1 7.3e-06 0.00045 12.0 0.0 3 41 147 184 145 185 0.87 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 1_10 - 225 DDE_Tnp_IS240 PF13610.1 140 3.4e-44 142.4 2.7 1 1 1.5e-45 4.7e-44 142.0 2.7 3 139 72 203 70 204 0.95 # 8767 # 9441 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.338 2_18 - 225 DDE_Tnp_IS240 PF13610.1 140 4.4e-44 142.1 2.7 1 1 2e-45 6.2e-44 141.6 2.7 3 139 72 203 70 204 0.95 # 15028 # 15702 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.345 2_16 - 193 HTH_IclR PF09339.5 52 0.00012 13.9 0.0 1 1 1e-05 0.00031 12.6 0.0 6 43 150 185 147 188 0.86 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 3_11 - 193 HTH_IclR PF09339.5 52 0.00016 13.5 0.0 1 1 1.3e-05 0.00041 12.2 0.0 7 43 151 185 150 188 0.85 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 2_11 - 162 HTH_10 PF04967.7 53 3.8e-06 18.7 0.0 1 1 2.7e-07 8.3e-06 17.6 0.0 25 46 3 24 1 29 0.89 # 8840 # 9325 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.233 3_10 - 235 HTH_10 PF04967.7 53 2.1e-05 16.3 0.1 1 1 2.1e-06 6.3e-05 14.8 0.1 24 47 32 55 29 61 0.89 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 3_12 - 203 HTH_7 PF02796.10 45 1.5e-23 74.7 1.7 1 1 1.4e-24 2.2e-23 74.1 0.2 1 45 147 199 147 199 0.96 # 15403 # 16011 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.315 2_17 - 204 HTH_7 PF02796.10 45 6.3e-23 72.7 1.2 1 1 6.2e-24 9.4e-23 72.1 0.2 1 45 147 199 147 199 0.96 # 14207 # 14818 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 3_11 - 193 HTH_7 PF02796.10 45 4.8e-20 63.5 0.2 1 1 6.7e-21 1e-19 62.4 0.2 1 44 140 183 140 184 0.98 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 2_16 - 193 HTH_7 PF02796.10 45 1.2e-19 62.2 0.2 1 1 1.8e-20 2.7e-19 61.0 0.2 1 44 140 183 140 184 0.98 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 2_4 - 176 Acetyltransf_8 PF13523.1 152 4.4e-13 41.6 0.0 1 1 6.3e-14 3.9e-12 38.5 0.0 3 141 6 150 4 156 0.75 # 2685 # 3212 # -1 # ID=2_4;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.265 2_16 - 193 HTH_DeoR PF08220.7 57 4.4e-05 15.2 0.0 1 1 8.3e-06 0.0001 14.1 0.0 16 41 162 187 148 189 0.81 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 3_11 - 193 HTH_DeoR PF08220.7 57 4.7e-05 15.1 0.0 1 1 8.8e-06 0.00011 14.0 0.0 16 41 162 187 149 189 0.83 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 2_11 - 162 HTH_DeoR PF08220.7 57 6.9e-05 14.6 0.1 1 1 1.7e-05 0.0002 13.1 0.0 16 31 3 18 2 34 0.86 # 8840 # 9325 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.233 1_8 - 150 HTH_DeoR PF08220.7 57 0.00029 12.6 0.3 1 1 7e-05 0.00085 11.1 0.3 1 39 6 50 6 56 0.71 # 7453 # 7902 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.253 2_15 - 127 HTH_DeoR PF08220.7 57 0.00049 11.9 0.3 1 1 0.00017 0.0021 9.9 0.1 8 46 18 60 14 62 0.76 # 12855 # 13235 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.249 1_1 - 401 DctM PF06808.7 416 1.1e-12 39.4 31.9 1 2 2.4e-06 0.00014 12.6 7.2 287 368 17 102 2 118 0.71 # 65 # 1267 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 1_1 - 401 DctM PF06808.7 416 1.1e-12 39.4 31.9 2 2 5.8e-12 3.6e-10 31.1 18.9 177 412 132 396 93 399 0.78 # 65 # 1267 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 2_12 - 149 Rep_3 PF01051.16 222 3.3e-23 74.6 6.0 1 1 8e-25 4.9e-23 74.1 6.0 137 222 2 86 1 86 0.95 # 9344 # 9790 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.271 2_16 - 193 Phage_antitermQ PF06530.7 126 0.00046 12.0 0.0 1 2 0.037 1.1 1.0 0.0 52 95 58 101 24 112 0.76 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 2_16 - 193 Phage_antitermQ PF06530.7 126 0.00046 12.0 0.0 2 2 0.00016 0.0049 8.7 0.0 62 101 144 183 141 189 0.90 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 3_11 - 193 Phage_antitermQ PF06530.7 126 0.0005 11.9 0.0 1 2 0.042 1.3 0.9 0.0 52 95 58 101 37 112 0.83 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 3_11 - 193 Phage_antitermQ PF06530.7 126 0.0005 11.9 0.0 2 2 0.00016 0.0049 8.7 0.0 62 101 144 183 141 189 0.90 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 3_6 - 797 DEAD PF00270.24 169 5.3e-11 34.5 1.2 1 1 3.4e-12 2.1e-10 32.5 0.0 10 132 88 217 80 236 0.81 # 6858 # 9248 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.307 2_7 - 796 Hydrolase_6 PF13344.1 101 1.4e-05 17.2 0.5 1 1 1.8e-06 0.00011 14.3 0.1 6 51 612 657 609 698 0.82 # 4368 # 6755 # -1 # ID=2_7;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 3_12 - 203 HTH_23 PF13384.1 50 4e-10 31.4 0.3 1 1 1.1e-10 9.3e-10 30.2 0.1 6 39 164 197 159 199 0.89 # 15403 # 16011 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.315 2_17 - 204 HTH_23 PF13384.1 50 1.8e-09 29.3 0.3 1 1 4.7e-10 4.1e-09 28.2 0.0 4 39 162 197 159 201 0.89 # 14207 # 14818 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 3_11 - 193 HTH_23 PF13384.1 50 4.6e-08 24.8 0.0 1 1 1.3e-08 1.1e-07 23.6 0.0 13 42 156 185 150 190 0.86 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 2_16 - 193 HTH_23 PF13384.1 50 4.8e-08 24.8 0.0 1 1 1.4e-08 1.2e-07 23.5 0.0 13 42 156 185 150 190 0.88 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 2_18 - 225 HTH_23 PF13384.1 50 9e-06 17.5 1.2 1 1 1.4e-05 0.00013 13.9 0.1 28 41 41 54 40 57 0.92 # 15028 # 15702 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.345 1_10 - 225 HTH_23 PF13384.1 50 4.1e-05 15.4 1.9 1 1 1.6e-05 0.00014 13.7 0.1 28 41 41 54 40 57 0.92 # 8767 # 9441 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.338 2_11 - 162 HTH_23 PF13384.1 50 0.00061 11.7 0.0 1 1 0.00014 0.0012 10.8 0.0 18 36 2 20 2 28 0.87 # 8840 # 9325 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.233 2_7 - 796 DUF1687 PF07955.6 133 0.0041 9.3 3.9 1 3 0.093 5.7 -0.8 0.1 72 106 29 65 19 71 0.80 # 4368 # 6755 # -1 # ID=2_7;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 2_7 - 796 DUF1687 PF07955.6 133 0.0041 9.3 3.9 2 3 0.00023 0.014 7.6 0.5 28 114 91 173 82 175 0.78 # 4368 # 6755 # -1 # ID=2_7;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 2_7 - 796 DUF1687 PF07955.6 133 0.0041 9.3 3.9 3 3 0.04 2.5 0.3 0.0 30 115 619 699 605 709 0.65 # 4368 # 6755 # -1 # ID=2_7;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 3_10 - 235 HTH_45 PF14947.1 77 9.8e-08 24.0 2.0 1 2 3.8e-05 0.0023 10.0 0.0 10 52 21 65 18 78 0.75 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 3_10 - 235 HTH_45 PF14947.1 77 9.8e-08 24.0 2.0 2 2 4.3e-06 0.00026 13.0 0.2 37 69 123 156 100 162 0.87 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 2_9 - 102 SH3BGR PF04908.10 99 8.4e-05 14.7 0.0 1 1 1.6e-06 9.6e-05 14.6 0.0 20 54 28 62 21 100 0.78 # 7190 # 7495 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.255 2_7 - 796 Hydrolase_3 PF08282.7 254 8.2e-10 30.8 9.7 1 3 0.036 2.2 -0.1 0.6 82 140 89 154 20 169 0.64 # 4368 # 6755 # -1 # ID=2_7;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 2_7 - 796 Hydrolase_3 PF08282.7 254 8.2e-10 30.8 9.7 2 3 7.9e-07 4.8e-05 15.2 0.2 15 58 620 663 614 666 0.91 # 4368 # 6755 # -1 # ID=2_7;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 2_7 - 796 Hydrolase_3 PF08282.7 254 8.2e-10 30.8 9.7 3 3 3.5e-08 2.1e-06 19.6 0.3 197 242 677 722 671 724 0.91 # 4368 # 6755 # -1 # ID=2_7;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 2_4 - 176 Acetyltransf_7 PF13508.1 79 3e-08 26.0 0.0 1 1 7.2e-10 4.4e-08 25.5 0.0 11 77 68 145 58 147 0.74 # 2685 # 3212 # -1 # ID=2_4;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.265 3_11 - 193 UPF0122 PF04297.9 101 0.00018 13.8 0.1 1 1 1.6e-05 0.00049 12.4 0.0 19 59 146 186 142 190 0.86 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 2_16 - 193 UPF0122 PF04297.9 101 0.00024 13.4 0.0 1 1 1.8e-05 0.00055 12.2 0.0 18 59 145 186 142 190 0.87 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 2_15 - 127 S-AdoMet_synt_M PF02772.11 120 0.00034 12.8 1.9 1 2 1.4e-05 0.00086 11.5 1.2 64 106 21 62 3 74 0.78 # 12855 # 13235 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.249 2_15 - 127 S-AdoMet_synt_M PF02772.11 120 0.00034 12.8 1.9 2 2 0.045 2.7 0.2 0.0 64 90 89 115 70 126 0.62 # 12855 # 13235 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.249 1_15 - 256 TIGR02168 TIGR02168 1181 3.2e-06 16.9 34.6 1 1 6.5e-08 4e-06 16.6 34.6 253 433 48 228 30 243 0.83 # 16618 # 17385 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.268 2_4 - 176 Acetyltransf_10 PF13673.1 117 0.00013 14.3 0.0 1 1 3.4e-06 0.00021 13.7 0.0 29 117 36 145 12 145 0.68 # 2685 # 3212 # -1 # ID=2_4;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.265 3_11 - 193 HTH_11 PF08279.7 55 6.7e-09 27.6 0.1 1 1 1.8e-09 1.6e-08 26.4 0.1 4 41 151 186 147 189 0.81 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 2_16 - 193 HTH_11 PF08279.7 55 6.9e-09 27.5 0.1 1 1 1.8e-09 1.6e-08 26.4 0.1 2 41 149 186 148 189 0.87 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 3_10 - 235 HTH_11 PF08279.7 55 1.6e-07 23.2 0.0 1 1 4.8e-08 4.1e-07 21.8 0.0 15 55 31 73 19 73 0.87 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 3_12 - 203 HTH_11 PF08279.7 55 1.3e-05 17.1 0.4 1 1 8.4e-06 7.3e-05 14.6 0.1 6 34 169 194 166 195 0.81 # 15403 # 16011 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.315 2_11 - 162 HTH_11 PF08279.7 55 8.1e-05 14.5 0.0 1 1 3.1e-05 0.00027 12.8 0.0 17 43 3 29 3 37 0.83 # 8840 # 9325 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.233 2_17 - 204 HTH_11 PF08279.7 55 0.00014 13.7 0.1 1 1 6e-05 0.00052 11.9 0.1 18 34 178 194 166 195 0.77 # 14207 # 14818 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 1_15 - 256 HTH_11 PF08279.7 55 0.00026 12.9 0.0 1 1 0.00016 0.0014 10.6 0.0 19 40 5 26 2 34 0.87 # 16618 # 17385 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.268 1_8 - 150 Arg_repressor PF01316.16 70 1.3e-11 36.1 4.0 1 1 7.6e-13 2.3e-11 35.4 4.0 1 63 1 64 1 72 0.95 # 7453 # 7902 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.253 2_18 - 225 Arg_repressor PF01316.16 70 0.00019 13.2 0.0 1 1 1.8e-05 0.00056 11.7 0.0 24 48 30 54 25 74 0.81 # 15028 # 15702 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.345 2_16 - 193 SpoIIID PF12116.3 82 0.00037 12.7 0.0 1 1 1.2e-05 0.00073 11.7 0.0 4 40 145 181 142 191 0.86 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 4_8 - 264 MipZ PF09140.6 261 1.9e-06 19.3 0.3 1 1 4.3e-07 2.6e-05 15.6 0.3 2 43 3 45 2 156 0.70 # 7833 # 8624 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 3_12 - 203 HTH_28 PF13518.1 52 3.6e-09 28.8 0.0 1 1 9.3e-10 9.4e-09 27.4 0.0 4 34 167 197 166 200 0.94 # 15403 # 16011 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.315 2_17 - 204 HTH_28 PF13518.1 52 1.1e-08 27.3 0.0 1 1 2.5e-09 2.5e-08 26.1 0.0 4 34 167 197 166 200 0.94 # 14207 # 14818 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 1_10 - 225 HTH_28 PF13518.1 52 2.1e-05 16.7 0.8 1 1 9e-06 9.2e-05 14.7 0.8 14 36 30 54 17 55 0.82 # 8767 # 9441 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.338 2_16 - 193 HTH_28 PF13518.1 52 2.2e-05 16.7 0.0 1 1 6.2e-06 6.3e-05 15.2 0.0 8 38 156 186 155 189 0.93 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 3_11 - 193 HTH_28 PF13518.1 52 2.3e-05 16.6 0.0 1 1 5.8e-06 5.8e-05 15.3 0.0 8 38 156 186 152 189 0.93 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 2_18 - 225 HTH_28 PF13518.1 52 5.2e-05 15.5 0.4 1 1 2.3e-05 0.00023 13.4 0.4 15 36 31 54 16 55 0.80 # 15028 # 15702 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.345 2_7 - 796 HAD PF12710.2 192 1.2e-18 60.1 0.0 1 1 4e-20 2.4e-18 59.2 0.0 1 191 493 698 493 699 0.66 # 4368 # 6755 # -1 # ID=2_7;partial=00;start_type=TTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.351 2_9 - 102 Glutaredoxin PF00462.19 60 4.6e-13 41.3 0.0 1 1 1e-14 6.2e-13 40.8 0.0 2 51 18 67 17 76 0.95 # 7190 # 7495 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.255 4_8 - 264 VirC1 PF07015.6 231 5.9e-05 14.4 0.2 1 2 3.9e-06 0.00024 12.4 0.0 1 39 1 40 1 53 0.76 # 7833 # 8624 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 4_8 - 264 VirC1 PF07015.6 231 5.9e-05 14.4 0.2 2 2 0.073 4.4 -1.6 0.0 83 111 123 152 95 165 0.75 # 7833 # 8624 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 2_18 - 225 HTH_Tnp_4 PF13613.1 53 0.00011 13.9 0.3 1 1 2.1e-05 0.00042 12.1 0.3 30 49 41 60 20 63 0.84 # 15028 # 15702 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.345 3_11 - 193 HTH_Tnp_4 PF13613.1 53 0.00039 12.2 0.0 1 1 3.9e-05 0.0008 11.2 0.0 24 43 165 184 159 186 0.88 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 2_16 - 193 HTH_Tnp_4 PF13613.1 53 0.00039 12.2 0.0 1 1 3.9e-05 0.0008 11.2 0.0 24 43 165 184 159 186 0.88 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 4_8 - 264 Fer4_NifH PF00142.13 273 7e-06 17.5 0.0 1 1 2.2e-07 1.3e-05 16.6 0.0 8 50 10 53 3 84 0.78 # 7833 # 8624 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 1_14 - 418 S4 PF01479.20 48 1.1e-09 29.8 0.0 1 1 5e-11 3.1e-09 28.4 0.0 4 45 353 394 351 396 0.94 # 15216 # 16469 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.303 3_7 - 504 TIGR03999 TIGR03999 375 1.8e-14 45.2 0.1 1 1 4.4e-16 2.7e-14 44.7 0.1 210 374 331 501 321 502 0.81 # 9266 # 10777 # 1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 2_11 - 162 MerR_1 PF13411.1 69 1.8e-06 19.9 0.6 1 1 4.7e-08 2.8e-06 19.3 0.1 2 50 3 52 2 61 0.88 # 8840 # 9325 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG(G)/GGAGG;rbs_spacer=13-15bp;gc_cont=0.233 1_1 - 401 CitMHS PF03600.11 351 6e-12 36.9 7.5 1 2 9.9e-14 6e-12 36.9 7.5 44 237 2 228 1 231 0.80 # 65 # 1267 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 1_1 - 401 CitMHS PF03600.11 351 6e-12 36.9 7.5 2 2 0.038 2.3 -1.2 19.2 21 186 216 387 213 399 0.74 # 65 # 1267 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 3_12 - 203 CENP-B_N PF04218.8 53 7.1e-09 27.3 3.6 1 2 0.00075 0.023 6.4 0.3 13 35 117 139 115 142 0.85 # 15403 # 16011 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.315 3_12 - 203 CENP-B_N PF04218.8 53 7.1e-09 27.3 3.6 2 2 1.4e-08 4.2e-07 21.6 0.3 14 46 167 199 166 202 0.91 # 15403 # 16011 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.315 2_17 - 204 CENP-B_N PF04218.8 53 2.6e-08 25.5 2.1 1 2 0.00075 0.023 6.4 0.3 13 35 117 139 115 142 0.85 # 14207 # 14818 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 2_17 - 204 CENP-B_N PF04218.8 53 2.6e-08 25.5 2.1 2 2 1.3e-07 3.9e-06 18.5 0.1 14 49 167 202 166 203 0.90 # 14207 # 14818 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 1_3 - 310 GntR PF00392.16 64 0.00021 13.0 0.0 1 1 8.7e-06 0.00053 11.7 0.0 7 29 252 274 248 280 0.91 # 1750 # 2679 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.358 3_7 - 504 Glyco_trans_1_4 PF13692.1 135 1.4e-10 33.6 0.0 1 1 6e-12 3.6e-10 32.3 0.0 7 125 325 451 321 468 0.80 # 9266 # 10777 # 1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.300 3_10 - 235 Fe_dep_repress PF01325.14 60 0.00013 14.2 0.2 1 2 1.8e-05 0.0011 11.2 0.0 24 54 33 63 22 67 0.84 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 3_10 - 235 Fe_dep_repress PF01325.14 60 0.00013 14.2 0.2 2 2 0.055 3.4 0.0 0.0 31 45 86 100 72 107 0.71 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 2_9 - 102 DUF836 PF05768.9 81 2.3e-05 16.9 0.1 1 1 4.4e-07 2.7e-05 16.7 0.1 1 47 16 58 16 85 0.89 # 7190 # 7495 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.255 3_10 - 235 TetR_N PF00440.18 47 3.2e-05 15.8 0.0 1 1 6.3e-06 9.6e-05 14.3 0.0 9 32 24 47 21 51 0.86 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 3_11 - 193 TetR_N PF00440.18 47 0.00027 12.8 0.1 1 1 6.8e-05 0.001 11.0 0.0 16 36 160 180 158 180 0.92 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 3_12 - 203 TetR_N PF00440.18 47 0.00027 12.8 0.1 1 1 3.9e-05 0.0006 11.7 0.0 18 35 177 194 173 195 0.92 # 15403 # 16011 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.315 2_16 - 193 TetR_N PF00440.18 47 0.00027 12.8 0.1 1 1 6.8e-05 0.001 11.0 0.0 16 36 160 180 158 180 0.92 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 2_18 - 225 rve PF00665.21 120 4.3e-18 57.8 0.9 1 2 0.086 2.6 0.4 0.0 83 102 30 49 17 52 0.88 # 15028 # 15702 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.345 2_18 - 225 rve PF00665.21 120 4.3e-18 57.8 0.9 2 2 7.7e-19 2.4e-17 55.4 0.4 2 117 66 174 65 176 0.93 # 15028 # 15702 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.345 1_10 - 225 rve PF00665.21 120 4.4e-18 57.8 0.6 1 2 0.079 2.4 0.5 0.0 83 102 30 49 13 52 0.89 # 8767 # 9441 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.338 1_10 - 225 rve PF00665.21 120 4.4e-18 57.8 0.6 2 2 9.6e-19 2.9e-17 55.1 0.3 2 117 66 174 65 176 0.93 # 8767 # 9441 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.338 2_16 - 193 HTH_Mga PF08280.6 59 0.00012 14.1 1.2 1 1 6.8e-06 0.00021 13.3 0.3 1 44 143 185 143 187 0.93 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 3_11 - 193 HTH_Mga PF08280.6 59 0.00036 12.5 1.3 1 1 1.9e-05 0.00057 11.9 0.5 2 44 144 185 143 187 0.91 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 3_12 - 203 HTH_Tnp_1 PF01527.15 76 5.8e-05 15.3 0.1 1 2 0.09 2.8 0.3 0.0 6 28 107 129 106 140 0.75 # 15403 # 16011 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.315 3_12 - 203 HTH_Tnp_1 PF01527.15 76 5.8e-05 15.3 0.1 2 2 1.6e-05 0.00049 12.3 0.0 15 42 168 194 164 197 0.88 # 15403 # 16011 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.315 2_18 - 225 HTH_Tnp_1 PF01527.15 76 0.0043 9.3 3.9 1 1 0.00016 0.0048 9.1 0.3 24 47 29 54 5 68 0.70 # 15028 # 15702 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.345 3_12 - 203 HTH_38 PF13936.1 44 2.5e-07 22.4 0.3 1 1 1.7e-08 2.5e-07 22.4 0.3 15 39 170 194 159 195 0.91 # 15403 # 16011 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.315 3_11 - 193 HTH_38 PF13936.1 44 4.4e-06 18.5 0.0 1 1 7.1e-07 1.1e-05 17.2 0.0 13 41 153 181 143 183 0.86 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 2_17 - 204 HTH_38 PF13936.1 44 4.4e-06 18.4 1.7 1 1 5.6e-07 8.6e-06 17.5 0.1 15 39 170 194 160 198 0.93 # 14207 # 14818 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 2_16 - 193 HTH_38 PF13936.1 44 6.6e-06 17.9 0.0 1 1 1.1e-06 1.7e-05 16.6 0.0 14 41 154 181 145 183 0.90 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 3_12 - 203 Sigma70_r4 PF04545.11 50 1.9e-05 16.1 0.2 1 1 1.2e-06 3.8e-05 15.2 0.2 9 41 160 196 157 198 0.92 # 15403 # 16011 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.315 2_17 - 204 Sigma70_r4 PF04545.11 50 3.8e-05 15.2 0.1 1 1 2.6e-06 8e-05 14.2 0.1 9 42 160 197 157 198 0.94 # 14207 # 14818 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 2_4 - 176 Acetyltransf_1 PF00583.19 83 6e-15 47.3 0.0 1 1 1.5e-16 9.3e-15 46.7 0.0 5 82 69 145 65 146 0.92 # 2685 # 3212 # -1 # ID=2_4;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.265 1_11 - 617 Pyridoxal_deC PF00282.14 373 8e-27 85.7 0.1 1 3 4.9e-06 0.0003 11.5 0.1 14 96 62 145 51 179 0.83 # 10059 # 11909 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.319 1_11 - 617 Pyridoxal_deC PF00282.14 373 8e-27 85.7 0.1 2 3 1.5e-18 9.2e-17 52.6 0.0 149 236 235 330 194 336 0.86 # 10059 # 11909 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.319 1_11 - 617 Pyridoxal_deC PF00282.14 373 8e-27 85.7 0.1 3 3 5.2e-08 3.2e-06 17.9 0.0 238 352 364 478 361 490 0.77 # 10059 # 11909 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.319 3_10 - 235 HTH_27 PF13463.1 68 4.1e-08 25.7 0.6 1 2 1.9e-06 5.7e-05 15.7 0.0 8 63 22 70 17 76 0.87 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 3_10 - 235 HTH_27 PF13463.1 68 4.1e-08 25.7 0.6 2 2 0.0019 0.058 6.0 0.1 37 68 124 149 117 149 0.78 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 2_15 - 127 HTH_27 PF13463.1 68 0.00039 13.0 0.0 1 1 8e-05 0.0024 10.4 0.0 4 54 11 64 8 70 0.92 # 12855 # 13235 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.249 2_14 - 586 SprT-like PF10263.4 157 9.1e-05 14.4 0.0 1 1 3.8e-06 0.00023 13.0 0.0 7 71 145 206 140 209 0.82 # 11108 # 12865 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.261 4_4 - 178 DDE_Tnp_1 PF01609.16 213 4.8e-12 38.0 0.1 1 1 1.3e-13 8.2e-12 37.3 0.1 57 166 4 163 3 173 0.89 # 4545 # 5078 # -1 # ID=4_4;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.279 3_12 - 203 HTH_Tnp_IS630 PF01710.11 120 1.7e-05 16.7 0.1 1 1 2.9e-06 4.4e-05 15.4 0.1 9 38 166 195 163 201 0.89 # 15403 # 16011 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.315 3_11 - 193 HTH_Tnp_IS630 PF01710.11 120 9.4e-05 14.3 0.0 1 1 1.2e-05 0.00018 13.4 0.0 17 48 159 190 134 192 0.86 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 2_16 - 193 HTH_Tnp_IS630 PF01710.11 120 0.00012 13.9 0.0 1 1 1.5e-05 0.00023 13.1 0.0 17 48 159 190 148 192 0.85 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 2_17 - 204 HTH_Tnp_IS630 PF01710.11 120 0.00016 13.6 0.1 1 1 2.8e-05 0.00043 12.2 0.1 9 37 166 194 162 201 0.91 # 14207 # 14818 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 3_12 - 203 HTH_40 PF14493.1 91 1.6e-05 17.3 0.1 1 1 2.9e-06 4.4e-05 15.9 0.1 7 31 169 193 165 194 0.92 # 15403 # 16011 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.315 3_11 - 193 HTH_40 PF14493.1 91 4.2e-05 16.0 0.0 1 1 5.8e-06 8.8e-05 15.0 0.0 8 42 155 189 153 191 0.90 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 2_16 - 193 HTH_40 PF14493.1 91 4.3e-05 16.0 0.0 1 1 5.8e-06 8.8e-05 15.0 0.0 8 42 155 189 153 191 0.90 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 2_17 - 204 HTH_40 PF14493.1 91 7.7e-05 15.1 0.1 1 1 1.4e-05 0.00021 13.7 0.1 7 31 169 193 165 195 0.92 # 14207 # 14818 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 3_12 - 203 HTH_3 PF01381.17 55 0.00019 13.5 0.8 1 1 5.8e-06 0.00035 12.7 0.1 11 32 177 198 170 201 0.85 # 15403 # 16011 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.315 1_10 - 225 DDE_3 PF13358.1 146 5.3e-06 18.5 0.3 1 1 3e-07 9.1e-06 17.7 0.3 26 95 74 143 58 198 0.76 # 8767 # 9441 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.338 2_18 - 225 DDE_3 PF13358.1 146 6.4e-06 18.2 0.3 1 1 4.5e-07 1.4e-05 17.1 0.2 26 95 74 143 60 198 0.76 # 15028 # 15702 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.345 1_8 - 150 HTH_Tnp_Tc3_2 PF01498.13 72 0.00037 12.8 0.4 1 1 1e-05 0.00063 12.1 0.4 4 64 10 72 8 78 0.85 # 7453 # 7902 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.253 1_10 - 225 DDE_Tnp_IS66 PF03050.9 271 2.9e-07 22.1 3.6 1 2 2.3e-08 6.9e-07 20.9 0.9 16 97 21 96 7 134 0.75 # 8767 # 9441 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.338 1_10 - 225 DDE_Tnp_IS66 PF03050.9 271 2.9e-07 22.1 3.6 2 2 0.016 0.49 1.7 0.1 243 264 163 184 156 190 0.81 # 8767 # 9441 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.338 2_18 - 225 DDE_Tnp_IS66 PF03050.9 271 3.4e-07 21.9 3.9 1 2 2.4e-08 7.4e-07 20.8 1.1 18 97 23 96 8 136 0.76 # 15028 # 15702 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.345 2_18 - 225 DDE_Tnp_IS66 PF03050.9 271 3.4e-07 21.9 3.9 2 2 0.017 0.53 1.6 0.1 243 264 163 184 158 190 0.81 # 15028 # 15702 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.345 3_10 - 235 TrmB PF01978.14 68 8.8e-08 24.1 0.3 1 2 7.1e-07 8.7e-06 17.7 0.0 22 63 31 72 20 77 0.86 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 3_10 - 235 TrmB PF01978.14 68 8.8e-08 24.1 0.3 2 2 0.04 0.49 2.4 0.0 41 60 124 143 123 147 0.80 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 3_11 - 193 TrmB PF01978.14 68 3.5e-06 18.9 0.0 1 1 6.4e-07 7.8e-06 17.8 0.0 8 48 147 186 144 188 0.77 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 2_16 - 193 TrmB PF01978.14 68 5.6e-06 18.3 0.0 1 1 1.1e-06 1.3e-05 17.1 0.0 22 48 160 186 145 188 0.81 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 4_7 - 337 TrmB PF01978.14 68 0.00034 12.6 0.1 1 1 7.9e-05 0.00097 11.1 0.0 23 56 47 80 30 95 0.89 # 6251 # 7261 # -1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.263 2_17 - 204 TrmB PF01978.14 68 0.00057 11.9 0.8 1 1 0.00012 0.0015 10.5 0.2 19 42 172 195 163 196 0.83 # 14207 # 14818 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 4_8 - 264 CbiA PF01656.18 195 6.1e-31 99.5 0.4 1 1 1.2e-32 7.6e-31 99.2 0.4 1 193 4 225 4 227 0.80 # 7833 # 8624 # 1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287 2_4 - 176 TIGR01575 TIGR01575 132 4.3e-12 38.3 0.1 1 1 9.7e-14 5.9e-12 37.8 0.1 38 122 66 155 28 162 0.83 # 2685 # 3212 # -1 # ID=2_4;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.265 2_14 - 586 Peptidase_M48 PF01435.13 226 0.00033 12.4 0.0 1 1 1.2e-05 0.00071 11.3 0.0 65 124 174 230 115 268 0.77 # 11108 # 12865 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.261 3_10 - 235 Rrf2 PF02082.15 83 3e-05 16.3 0.2 1 1 2.6e-06 7.8e-05 15.0 0.1 15 59 21 65 13 88 0.82 # 13845 # 14549 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.325 2_16 - 193 Rrf2 PF02082.15 83 0.00051 12.4 0.0 1 1 4.3e-05 0.0013 11.1 0.0 14 52 150 187 147 188 0.90 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 3_12 - 203 HTH_8 PF02954.14 42 0.00017 13.4 0.0 1 1 8.9e-06 0.00054 11.8 0.0 17 37 174 194 169 196 0.89 # 15403 # 16011 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.315 3_6 - 797 SecA_DEAD PF07517.9 266 2.1e-97 317.7 1.3 1 1 3.4e-99 2.1e-97 317.7 1.3 7 265 8 385 2 386 0.96 # 6858 # 9248 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.307 3_11 - 193 Trp_repressor PF01371.14 88 1.9e-05 16.8 0.6 1 1 3.9e-06 0.00012 14.2 0.0 39 79 150 190 146 192 0.89 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 2_16 - 193 Trp_repressor PF01371.14 88 2.3e-05 16.5 0.7 1 2 0.096 2.9 0.2 0.1 3 33 87 117 72 124 0.83 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 2_16 - 193 Trp_repressor PF01371.14 88 2.3e-05 16.5 0.7 2 2 5e-06 0.00015 13.9 0.1 40 79 151 190 143 192 0.86 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 1_4 - 333 TIGR00670 TIGR00670 304 4.2e-36 116.4 0.0 1 2 1.4e-37 8.3e-36 115.5 0.0 2 275 8 283 7 303 0.88 # 2699 # 3697 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.337 1_4 - 333 TIGR00670 TIGR00670 304 4.2e-36 116.4 0.0 2 2 0.08 4.9 -2.0 0.0 270 292 297 319 293 330 0.68 # 2699 # 3697 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.337 1_16 - 311 RepA_N PF06970.6 76 1.1e-34 110.4 6.5 1 1 5.6e-36 3.4e-34 108.8 6.5 1 76 15 90 15 90 0.99 # 17826 # 18758 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.277 2_18 - 225 HTH_32 PF13565.1 77 5.4e-08 25.8 0.6 1 2 1.6e-06 2e-05 17.6 0.1 49 76 26 50 12 51 0.87 # 15028 # 15702 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.345 2_18 - 225 HTH_32 PF13565.1 77 5.4e-08 25.8 0.6 2 2 0.005 0.061 6.4 0.0 28 63 135 171 102 183 0.72 # 15028 # 15702 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.345 1_10 - 225 HTH_32 PF13565.1 77 3.9e-07 23.1 0.6 1 2 1.2e-05 0.00015 14.8 0.1 49 76 26 50 11 51 0.86 # 8767 # 9441 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.338 1_10 - 225 HTH_32 PF13565.1 77 3.9e-07 23.1 0.6 2 2 0.005 0.061 6.4 0.0 28 63 135 171 102 183 0.72 # 8767 # 9441 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.338 3_11 - 193 HTH_32 PF13565.1 77 1e-05 18.5 0.3 1 1 1.7e-06 2.1e-05 17.5 0.3 19 77 131 181 118 181 0.80 # 14698 # 15276 # 1 # ID=3_11;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.328 2_16 - 193 HTH_32 PF13565.1 77 4.3e-05 16.5 0.3 1 1 7.1e-06 8.7e-05 15.5 0.3 19 77 131 181 118 181 0.81 # 13498 # 14076 # 1 # ID=2_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 1_8 - 150 HTH_32 PF13565.1 77 0.00016 14.7 0.0 1 1 3.2e-05 0.00039 13.5 0.0 37 75 7 44 1 46 0.71 # 7453 # 7902 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.253 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/c4d1c6b3-cb59-4506-83b3-7bf1acaebf9d # Target file: checkm_output/bins/pGCA_002591175.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002591175.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/c4d1c6b3-cb59-4506-83b3-7bf1acaebf9d checkm_output/bins/pGCA_002591175.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/Staphylococcus/training_20210111 # Date: Mon Jan 11 14:55:33 2021 # [ok]