#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
1_4                  -            332 Ribosomal_L11        PF00298.14    69   2.9e-05   13.0   1.7   1   2     2e-05    0.0001   11.2   0.1    16    43    23    51    16    63 0.90 # 1273 # 2268 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294
1_4                  -            332 Ribosomal_L11        PF00298.14    69   2.9e-05   13.0   1.7   2   2     0.078      0.39   -0.3   0.1    30    57   211   238   206   239 0.77 # 1273 # 2268 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.294
1_1                  -             91 HTH_34               PF13601.1     80     1e-05   14.3   0.2   1   1   2.9e-06   1.5e-05   13.8   0.2     2    49    27    74    26    79 0.93 # 2 # 274 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.234
1_1                  -             91 HTH_20               PF12840.2     61   1.8e-06   16.5   0.0   1   1   4.2e-07   2.1e-06   16.2   0.0    15    58    31    73    17    76 0.87 # 2 # 274 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.234
1_1                  -             91 HTH_5                PF01022.15    47   1.1e-18   55.4   1.6   1   1   3.8e-19   1.9e-18   54.7   1.6     1    45    24    69    24    71 0.95 # 2 # 274 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.234
1_2                  -            152 ATP-synt_8           PF00895.15    54      0.08    2.0  11.9   1   2    0.0062     0.031    3.3   4.5    11    24    89   102    80   111 0.58 # 265 # 720 # 1 # ID=1_2;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.276
1_2                  -            152 ATP-synt_8           PF00895.15    54      0.08    2.0  11.9   2   2    0.0089     0.044    2.8   0.8     7    25   121   139   119   147 0.84 # 265 # 720 # 1 # ID=1_2;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.276
1_2                  -            152 Cad                  PF03596.8    191   1.7e-66  212.2  10.7   1   1   3.9e-67   1.9e-66  212.0  10.7    45   191     2   149     1   149 0.99 # 265 # 720 # 1 # ID=1_2;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.276
1_2                  -            152 Sdh_cyt              PF01127.17   121   3.6e-05   12.3   8.1   1   2   0.00063    0.0032    6.0   0.0    73   120    14    63     3    64 0.82 # 265 # 720 # 1 # ID=1_2;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.276
1_2                  -            152 Sdh_cyt              PF01127.17   121   3.6e-05   12.3   8.1   2   2   0.00091    0.0045    5.5   6.9    33    78    90   135    73   138 0.53 # 265 # 720 # 1 # ID=1_2;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.276
#
# Program:         hmmsearch
# Version:         3.1b2 (February 2015)
# Pipeline mode:   SEARCH
# Query file:      /tmp/6eaf770e-efbb-44b6-b99e-30bfc0e2c71c
# Target file:     checkm_output/bins/pGCA_002214665.1.assembled/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_002214665.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/6eaf770e-efbb-44b6-b99e-30bfc0e2c71c checkm_output/bins/pGCA_002214665.1.assembled/genes.faa 
# Current dir:     /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/Staphylococcus/training_20210111
# Date:            Mon Jan 11 14:55:13 2021
# [ok]