# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_20 - 338 AlaDh_PNT_C PF01262.16 168 3.3e-09 27.7 0.1 1 1 2.1e-10 6.2e-09 26.8 0.1 19 68 159 209 150 232 0.88 # 17992 # 19005 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.337 1_21 - 160 PaaX PF07848.7 70 0.00031 12.0 0.0 1 1 1.9e-05 0.00054 11.2 0.0 25 59 61 95 57 106 0.85 # 19330 # 19809 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_22 - 448 TIGR01292 TIGR01292 300 1.5e-13 41.0 1.0 1 3 7.4e-05 0.0021 7.7 0.0 141 172 3 34 1 44 0.85 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 TIGR01292 TIGR01292 300 1.5e-13 41.0 1.0 2 3 4.5e-05 0.0013 8.4 0.0 88 121 117 149 82 156 0.76 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 TIGR01292 TIGR01292 300 1.5e-13 41.0 1.0 3 3 3.9e-09 1.1e-07 21.7 0.2 144 280 167 305 161 322 0.73 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_3 - 152 MarR_2 PF12802.2 62 8.1e-11 32.7 0.0 1 1 1.8e-11 1.7e-10 31.7 0.0 4 61 40 94 39 95 0.92 # 2023 # 2478 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.281 1_21 - 160 MarR_2 PF12802.2 62 1.1e-10 32.3 0.0 1 1 2.5e-11 2.4e-10 31.2 0.0 2 61 42 99 41 100 0.97 # 19330 # 19809 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_12 - 184 MarR_2 PF12802.2 62 7.4e-05 13.6 0.0 1 1 2.1e-05 0.0002 12.2 0.0 13 43 153 181 148 182 0.91 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_22 - 448 FAD_oxidored PF12831.2 428 3.6e-05 14.0 0.0 1 2 0.0001 0.0029 7.8 0.0 1 36 5 40 5 58 0.89 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 FAD_oxidored PF12831.2 428 3.6e-05 14.0 0.0 2 2 0.0012 0.034 4.2 0.0 91 148 207 259 183 329 0.79 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 TIGR00275 TIGR00275 401 4.6e-07 19.7 0.5 1 3 0.001 0.03 3.9 0.0 2 34 7 39 6 64 0.91 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 TIGR00275 TIGR00275 401 4.6e-07 19.7 0.5 2 3 0.0097 0.28 0.7 0.0 140 161 119 140 99 152 0.83 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 TIGR00275 TIGR00275 401 4.6e-07 19.7 0.5 3 3 6.3e-06 0.00018 11.2 0.1 110 160 209 260 199 296 0.83 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_17 - 184 Thymidylate_kin PF02223.12 186 6.7e-05 13.5 0.0 1 1 3.1e-06 9e-05 13.0 0.0 6 48 88 132 86 170 0.79 # 16004 # 16555 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.366 1_21 - 160 HTH_Crp_2 PF13545.1 76 0.0001 13.3 0.1 1 2 0.048 1.4 0.0 0.0 2 17 14 29 13 44 0.73 # 19330 # 19809 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_21 - 160 HTH_Crp_2 PF13545.1 76 0.0001 13.3 0.1 2 2 2.1e-05 0.00061 10.8 0.0 34 61 65 97 57 113 0.72 # 19330 # 19809 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_12 - 184 HTH_17 PF12728.2 51 3.4e-06 18.5 0.7 1 1 3.3e-07 9.5e-06 17.0 0.0 2 24 160 182 160 183 0.92 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_12 - 184 HTH_19 PF12844.2 64 4.1e-05 14.8 0.1 1 1 3.3e-06 9.6e-05 13.6 0.1 5 36 152 183 149 183 0.87 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_12 - 184 Sigma70_r4_2 PF08281.7 54 3.1e-06 17.8 0.1 1 1 3.3e-07 9.6e-06 16.3 0.1 20 45 153 178 147 181 0.87 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_12 - 184 Mga PF05043.8 87 3.7e-06 18.4 0.3 1 1 3.5e-07 1e-05 17.0 0.1 22 53 151 182 147 183 0.95 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_22 - 448 DAO PF01266.19 358 4.8e-11 33.2 0.0 1 3 7.3e-06 0.00021 11.3 0.0 1 38 5 42 5 70 0.85 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 DAO PF01266.19 358 4.8e-11 33.2 0.0 2 3 0.00068 0.02 4.9 0.0 150 206 93 143 73 150 0.87 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 DAO PF01266.19 358 4.8e-11 33.2 0.0 3 3 1.8e-06 5.2e-05 13.4 0.0 151 200 209 258 204 263 0.88 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 TIGR01317 TIGR01317 485 7.4e-07 19.1 0.1 1 2 9.2e-07 2.7e-05 14.0 0.0 146 186 6 46 2 58 0.87 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 TIGR01317 TIGR01317 485 7.4e-07 19.1 0.1 2 2 0.0048 0.14 1.7 0.0 400 453 247 299 209 302 0.69 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_12 - 184 HTH_22 PF13309.1 64 1.9e-05 15.6 0.0 1 1 1.9e-06 5.5e-05 14.1 0.0 42 64 159 181 140 181 0.85 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_22 - 448 Pyr_redox_2 PF07992.9 201 5.8e-36 115.4 1.5 1 1 2.5e-35 7.3e-34 108.5 1.5 1 198 5 301 5 303 0.94 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_27 - 313 HTH_36 PF13730.1 55 8.1e-08 23.6 0.8 1 1 1.1e-08 1.6e-07 22.6 0.8 2 54 32 95 31 96 0.86 # 25323 # 26261 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.291 1_21 - 160 HTH_36 PF13730.1 55 0.00019 12.7 0.5 1 1 3.9e-05 0.00056 11.3 0.5 28 55 62 89 41 89 0.74 # 19330 # 19809 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_22 - 448 FAD_binding_3 PF01494.14 356 0.00024 11.3 0.0 1 1 3.2e-05 0.00093 9.4 0.0 2 56 4 62 3 312 0.79 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_21 - 160 Penicillinase_R PF03965.11 115 3.6e-06 18.3 0.2 1 2 0.097 2.8 -0.7 0.0 76 97 26 47 15 64 0.71 # 19330 # 19809 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_21 - 160 Penicillinase_R PF03965.11 115 3.6e-06 18.3 0.2 2 2 4.2e-07 1.2e-05 16.6 0.1 8 57 50 95 43 154 0.76 # 19330 # 19809 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_21 - 160 PadR PF03551.9 75 2.6e-05 15.2 0.0 1 1 1.5e-06 4.5e-05 14.4 0.0 29 69 71 109 51 115 0.77 # 19330 # 19809 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_22 - 448 3HCDH_N PF02737.13 180 0.0002 12.2 0.3 1 1 1.5e-05 0.00043 11.1 0.0 2 55 167 221 166 246 0.80 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_11 - 291 HTH_1 PF00126.22 60 3.2e-21 66.1 0.0 1 1 1.7e-22 4.8e-21 65.5 0.0 4 60 1 57 1 57 0.98 # 12023 # 12895 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.251 1_20 - 338 ADH_N PF08240.7 109 6e-17 52.6 0.0 1 1 1.6e-17 2.3e-16 50.7 0.0 2 106 27 126 26 128 0.92 # 17992 # 19005 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.337 1_1 - 199 ADH_N PF08240.7 109 5.2e-16 49.6 0.6 1 2 1.2e-15 1.7e-14 44.7 0.0 2 62 28 90 27 95 0.90 # 2 # 598 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.362 1_1 - 199 ADH_N PF08240.7 109 5.2e-16 49.6 0.6 2 2 0.0093 0.13 3.2 0.0 90 108 94 112 89 113 0.86 # 2 # 598 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.362 1_21 - 160 HTH_34 PF13601.1 80 1.9e-08 25.4 0.1 1 1 2.6e-09 3.8e-08 24.5 0.1 6 80 51 124 47 124 0.88 # 19330 # 19809 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_3 - 152 HTH_34 PF13601.1 80 6.3e-08 23.8 1.1 1 1 8.6e-09 1.2e-07 22.9 1.1 5 77 46 116 43 119 0.86 # 2023 # 2478 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.281 1_12 - 184 HTH_29 PF13551.1 112 2.7e-06 18.7 1.5 1 2 0.0026 0.077 4.4 0.4 37 63 124 148 117 162 0.73 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_12 - 184 HTH_29 PF13551.1 112 2.7e-06 18.7 1.5 2 2 3e-06 8.8e-05 13.9 0.0 8 34 155 181 147 182 0.84 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_22 - 448 Lycopene_cycl PF05834.7 374 1.1e-05 15.7 0.0 1 2 0.0019 0.054 3.4 0.0 1 34 5 36 5 46 0.86 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 Lycopene_cycl PF05834.7 374 1.1e-05 15.7 0.0 2 2 1.8e-05 0.00054 10.0 0.0 91 143 209 262 200 283 0.78 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_21 - 160 MarR PF01047.17 59 5.6e-19 58.9 0.2 1 1 1.3e-19 1.9e-18 57.2 0.1 1 58 43 100 43 101 0.97 # 19330 # 19809 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_3 - 152 MarR PF01047.17 59 4.6e-12 36.7 0.2 1 2 0.039 0.56 1.2 0.0 33 42 25 34 22 35 0.91 # 2023 # 2478 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.281 1_3 - 152 MarR PF01047.17 59 4.6e-12 36.7 0.2 2 2 3.8e-12 5.5e-11 33.3 0.1 1 58 39 95 39 96 0.96 # 2023 # 2478 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.281 1_21 - 160 HTH_20 PF12840.2 61 1.2e-05 16.3 0.0 1 1 9e-07 2.6e-05 15.2 0.0 15 57 50 92 45 95 0.89 # 19330 # 19809 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_1 - 199 TIGR02817 TIGR02817 336 6e-36 115.3 0.1 1 1 8.2e-37 8e-36 114.9 0.1 13 202 11 196 4 198 0.90 # 2 # 598 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.362 1_20 - 338 TIGR02817 TIGR02817 336 5.9e-26 82.4 1.1 1 1 1.6e-25 1.6e-24 77.8 1.1 15 247 12 259 5 273 0.81 # 17992 # 19005 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.337 1_29 - 100 TIGR02817 TIGR02817 336 2.6e-05 14.6 0.0 1 1 3.6e-06 3.4e-05 14.2 0.0 287 334 52 96 2 97 0.78 # 27585 # 27884 # -1 # ID=1_29;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.313 1_22 - 448 Pyr_redox_3 PF13738.1 203 1.1e-11 36.3 0.2 1 2 4.4e-06 0.00013 13.2 0.0 4 176 10 173 6 200 0.63 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 Pyr_redox_3 PF13738.1 203 1.1e-11 36.3 0.2 2 2 3e-08 8.7e-07 20.3 0.0 84 160 208 286 194 300 0.76 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_3 - 152 HTH_24 PF13412.1 48 9.7e-09 25.8 0.0 1 1 2.2e-09 2.2e-08 24.6 0.0 10 48 48 86 41 86 0.94 # 2023 # 2478 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.281 1_21 - 160 HTH_24 PF13412.1 48 3.3e-06 17.7 0.1 1 1 8.6e-07 8.3e-06 16.4 0.1 9 48 51 90 46 90 0.84 # 19330 # 19809 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_12 - 184 HTH_24 PF13412.1 48 3.3e-06 17.6 0.0 1 1 7.5e-07 7.3e-06 16.6 0.0 10 40 152 182 151 182 0.93 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_18 - 211 TIGR01740 TIGR01740 216 4.9e-18 56.4 8.7 1 1 6e-19 1.7e-17 54.6 8.7 3 215 5 203 3 204 0.79 # 16555 # 17187 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_22 - 448 FAD_binding_2 PF00890.19 417 3.3e-09 27.1 0.2 1 2 2.4e-07 6.8e-06 16.2 0.1 1 35 5 39 5 45 0.89 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 FAD_binding_2 PF00890.19 417 3.3e-09 27.1 0.2 2 2 6e-05 0.0017 8.3 0.0 368 402 272 300 268 305 0.90 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_18 - 211 OMPdecase PF00215.19 226 1.6e-34 110.4 7.5 1 1 6.7e-36 1.9e-34 110.1 7.5 2 225 2 202 1 203 0.94 # 16555 # 17187 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_18 - 211 Pterin_bind PF00809.17 210 1.3e-06 19.1 0.4 1 2 0.054 1.6 -0.8 0.0 10 37 51 82 44 93 0.67 # 16555 # 17187 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_18 - 211 Pterin_bind PF00809.17 210 1.3e-06 19.1 0.4 2 2 1.7e-07 5e-06 17.1 0.1 84 166 95 173 89 179 0.83 # 16555 # 17187 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_12 - 184 HTH_IclR PF09339.5 52 1.6e-06 18.8 0.0 1 1 1.2e-07 3.3e-06 17.8 0.0 17 39 158 180 153 182 0.87 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_3 - 152 Replic_Relax PF13814.1 191 5.7e-07 20.7 2.2 1 1 2.2e-07 6.4e-06 17.3 2.2 8 72 37 110 30 121 0.77 # 2023 # 2478 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.281 1_12 - 184 HTH_7 PF02796.10 45 1.3e-09 29.0 0.1 1 1 1.2e-10 3.5e-09 27.6 0.1 4 42 144 180 139 183 0.80 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_21 - 160 DUF2250 PF10007.4 93 0.00016 12.8 0.2 1 2 5.6e-05 0.0016 9.5 0.0 11 59 48 96 38 101 0.86 # 19330 # 19809 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_21 - 160 DUF2250 PF10007.4 93 0.00016 12.8 0.2 2 2 0.047 1.4 0.2 0.0 16 48 112 145 99 147 0.70 # 19330 # 19809 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_20 - 338 2-Hacid_dh_C PF02826.14 178 8.2e-05 12.9 0.1 1 1 5.4e-06 0.00016 12.0 0.1 35 81 160 206 147 214 0.87 # 17992 # 19005 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.337 1_12 - 184 LacI PF00356.16 46 7.1e-05 13.6 0.0 1 1 6.1e-06 0.00018 12.3 0.0 3 23 163 183 161 183 0.93 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_10 - 175 4HBT_2 PF13279.1 121 9.1e-07 20.6 0.0 1 1 4.1e-08 1.2e-06 20.2 0.0 14 114 24 128 14 154 0.70 # 11389 # 11913 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.303 1_20 - 338 ELFV_dehydrog PF00208.16 244 2.5e-07 21.6 0.3 1 1 1.6e-08 4.5e-07 20.8 0.3 31 88 160 217 136 286 0.80 # 17992 # 19005 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.337 1_22 - 448 Pyr_redox PF00070.22 80 1.6e-17 55.0 1.1 1 3 0.00019 0.0054 8.4 0.0 2 30 6 34 5 43 0.93 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 Pyr_redox PF00070.22 80 1.6e-17 55.0 1.1 2 3 0.062 1.8 0.3 0.0 41 61 91 111 81 113 0.83 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 Pyr_redox PF00070.22 80 1.6e-17 55.0 1.1 3 3 5.3e-15 1.5e-13 42.2 0.1 1 78 166 243 166 245 0.88 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_12 - 184 HTH_23 PF13384.1 50 6.3e-10 29.7 0.0 1 1 4.7e-11 1.4e-09 28.7 0.0 5 40 146 182 142 183 0.91 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_29 - 100 ADH_zinc_N_2 PF13602.1 127 2.8e-17 55.0 0.0 1 1 3.2e-18 3.1e-17 54.9 0.0 27 127 3 95 1 95 0.80 # 27585 # 27884 # -1 # ID=1_29;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.313 1_20 - 338 ADH_zinc_N_2 PF13602.1 127 2.1e-16 52.1 0.1 1 1 4.5e-17 4.4e-16 51.1 0.1 1 127 203 333 203 333 0.86 # 17992 # 19005 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.337 1_8 - 142 ADH_zinc_N_2 PF13602.1 127 1e-07 24.1 0.0 1 1 1.1e-08 1.1e-07 24.0 0.0 2 109 8 120 7 139 0.72 # 10457 # 10882 # 1 # ID=1_8;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.315 1_22 - 448 Trp_halogenase PF04820.9 454 4.6e-06 16.6 0.2 1 2 3.6e-05 0.001 8.8 0.1 1 36 5 37 5 41 0.90 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 Trp_halogenase PF04820.9 454 4.6e-06 16.6 0.2 2 2 0.00029 0.0085 5.8 0.0 155 217 207 267 202 290 0.79 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_12 - 184 UPF0122 PF04297.9 101 0.00012 13.3 0.1 1 1 1.1e-05 0.00031 11.9 0.1 27 56 153 182 142 183 0.83 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_20 - 338 Ubie_methyltran PF01209.13 233 0.00012 12.4 0.0 1 1 7.7e-06 0.00022 11.5 0.0 25 84 207 264 199 300 0.87 # 17992 # 19005 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.337 1_28 - 260 TIGR02168 TIGR02168 1181 2e-06 16.6 33.7 1 1 1.5e-07 2.2e-06 16.4 33.7 773 957 47 231 4 250 0.67 # 26699 # 27478 # 1 # ID=1_28;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.262 1_6 - 655 TIGR02168 TIGR02168 1181 0.084 1.2 62.5 1 1 0.018 0.27 -0.4 59.5 178 625 64 512 61 518 0.82 # 7914 # 9878 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.289 1_18 - 211 Ribul_P_3_epim PF00834.14 201 3.7e-08 23.8 1.8 1 1 2e-09 5.7e-08 23.2 1.8 49 200 44 193 11 194 0.82 # 16555 # 17187 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_18 - 211 IGPS PF00218.16 254 1.2e-06 18.8 0.6 1 1 6.4e-08 1.9e-06 18.2 0.6 121 252 67 201 43 203 0.78 # 16555 # 17187 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_12 - 184 HTH_11 PF08279.7 55 1.8e-10 31.5 0.2 1 1 5.4e-11 7.9e-10 29.5 0.1 6 37 151 181 147 182 0.89 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_28 - 260 HTH_11 PF08279.7 55 0.0001 13.1 0.0 1 1 3.3e-05 0.00048 11.0 0.0 21 40 10 29 6 34 0.87 # 26699 # 27478 # 1 # ID=1_28;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.262 1_2 - 213 TIGR00277 TIGR00277 84 7.8e-06 16.7 0.0 1 1 7.9e-07 2.3e-05 15.2 0.0 18 68 46 91 28 128 0.70 # 954 # 1592 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_12 - 184 HTH_28 PF13518.1 52 4.9e-07 20.9 1.2 1 1 2.4e-08 7.1e-07 20.4 0.0 2 34 148 181 147 183 0.87 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_10 - 175 4HBT PF03061.17 79 2.1e-16 51.1 0.0 1 1 9.5e-18 2.8e-16 50.7 0.0 2 75 27 100 26 104 0.96 # 11389 # 11913 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.303 1_20 - 338 ADH_zinc_N PF00107.21 130 8e-36 113.6 0.2 1 1 1.3e-36 1.2e-35 113.1 0.2 1 128 171 298 171 301 0.96 # 17992 # 19005 # -1 # ID=1_20;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.337 1_8 - 142 ADH_zinc_N PF00107.21 130 6.1e-21 65.5 0.1 1 1 7.9e-22 7.7e-21 65.2 0.1 29 128 3 100 1 102 0.97 # 10457 # 10882 # 1 # ID=1_8;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.315 1_1 - 199 ADH_zinc_N PF00107.21 130 3.3e-11 34.0 0.1 1 1 6.2e-12 6e-11 33.2 0.1 1 44 156 198 156 199 0.88 # 2 # 598 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.362 1_22 - 448 HI0933_like PF03486.9 409 4.3e-07 19.8 0.4 1 3 0.00012 0.0034 6.9 0.0 1 36 4 39 4 45 0.93 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 HI0933_like PF03486.9 409 4.3e-07 19.8 0.4 2 3 0.038 1.1 -1.3 0.0 145 166 120 140 105 142 0.81 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 HI0933_like PF03486.9 409 4.3e-07 19.8 0.4 3 3 2.3e-05 0.00067 9.3 0.0 113 165 209 260 204 294 0.81 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_21 - 160 LexA_DNA_bind PF01726.11 65 0.00025 11.8 0.0 1 1 1.9e-05 0.00057 10.7 0.0 27 61 61 94 46 97 0.88 # 19330 # 19809 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_12 - 184 CENP-B_N PF04218.8 53 5.2e-05 13.9 0.0 1 1 8.2e-06 0.00012 12.7 0.0 18 45 154 182 139 183 0.82 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_21 - 160 CENP-B_N PF04218.8 53 0.00014 12.5 0.0 1 1 2.4e-05 0.00035 11.2 0.0 7 45 43 82 39 85 0.92 # 19330 # 19809 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_22 - 448 NAD_binding_9 PF13454.1 156 0.00023 12.1 0.1 1 1 3.5e-05 0.001 10.0 0.0 89 155 197 259 178 260 0.76 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 GIDA PF01134.17 392 7.1e-07 19.4 3.5 1 2 1.6e-07 4.7e-06 16.8 2.7 1 180 5 167 5 244 0.66 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 GIDA PF01134.17 392 7.1e-07 19.4 3.5 2 2 0.014 0.41 0.5 0.1 97 150 204 259 187 291 0.84 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_18 - 211 HMGL-like PF00682.14 237 1.7e-08 25.5 0.2 1 2 1.7e-05 0.00051 10.9 0.1 9 104 8 101 3 112 0.76 # 16555 # 17187 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_18 - 211 HMGL-like PF00682.14 237 1.7e-08 25.5 0.2 2 2 2e-06 5.7e-05 14.0 0.0 3 69 103 173 101 183 0.89 # 16555 # 17187 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_3 - 152 FeoC PF09012.5 69 5.9e-06 17.2 0.0 1 1 3.2e-07 9.3e-06 16.5 0.0 8 52 49 93 40 102 0.90 # 2023 # 2478 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.281 1_27 - 313 YTH PF04146.10 140 2e-05 15.4 0.1 1 1 1.4e-06 4e-05 14.4 0.1 35 105 54 133 38 164 0.72 # 25323 # 26261 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.291 1_3 - 152 Fe_dep_repress PF01325.14 60 6.6e-07 20.4 1.1 1 2 0.0068 0.2 2.9 0.0 39 55 26 42 21 44 0.88 # 2023 # 2478 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.281 1_3 - 152 Fe_dep_repress PF01325.14 60 6.6e-07 20.4 1.1 2 2 4.2e-07 1.2e-05 16.4 0.3 10 53 44 86 42 95 0.90 # 2023 # 2478 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.281 1_17 - 184 TIGR01135 TIGR01135 607 1e-05 15.0 0.1 1 1 4.2e-07 1.2e-05 14.7 0.1 279 393 27 134 1 140 0.77 # 16004 # 16555 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.366 1_12 - 184 TetR_N PF00440.18 47 2.8e-05 14.9 0.0 1 2 0.037 1.1 0.3 0.0 11 21 3 13 1 13 0.82 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_12 - 184 TetR_N PF00440.18 47 2.8e-05 14.9 0.0 2 2 8.5e-06 0.00025 11.9 0.0 16 35 159 178 156 179 0.90 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_18 - 211 PcrB PF01884.12 231 8.3e-06 16.3 0.2 1 2 0.018 0.53 0.6 0.4 197 226 70 98 32 103 0.70 # 16555 # 17187 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_18 - 211 PcrB PF01884.12 231 8.3e-06 16.3 0.2 2 2 2.9e-07 8.3e-06 16.3 0.2 168 224 146 201 113 208 0.82 # 16555 # 17187 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_12 - 184 HTH_38 PF13936.1 44 6.3e-09 26.5 0.0 1 1 5.5e-10 1.6e-08 25.2 0.0 11 44 149 183 145 183 0.89 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_12 - 184 Sigma70_r4 PF04545.11 50 1.9e-06 18.3 0.0 1 1 1.7e-07 4.9e-06 17.0 0.0 13 42 151 181 142 182 0.80 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_21 - 160 HTH_27 PF13463.1 68 5.1e-14 43.6 0.2 1 1 6.7e-15 9.7e-14 42.7 0.2 1 68 43 109 43 109 0.98 # 19330 # 19809 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_3 - 152 HTH_27 PF13463.1 68 9.5e-10 29.9 0.0 1 1 1.4e-10 2.1e-09 28.9 0.0 1 68 39 104 39 104 0.94 # 2023 # 2478 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.281 1_22 - 448 TIGR03140 TIGR03140 515 2.6e-08 23.6 3.3 1 4 0.00054 0.016 4.5 0.0 211 249 2 41 1 50 0.89 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 TIGR03140 TIGR03140 515 2.6e-08 23.6 3.3 2 4 0.00015 0.0043 6.4 0.1 254 332 77 149 70 156 0.80 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 TIGR03140 TIGR03140 515 2.6e-08 23.6 3.3 3 4 0.00093 0.027 3.7 0.1 272 322 210 260 203 275 0.85 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_22 - 448 TIGR03140 TIGR03140 515 2.6e-08 23.6 3.3 4 4 9.4e-05 0.0027 7.0 0.0 459 489 273 302 261 308 0.83 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_18 - 211 Aldolase PF01081.14 196 0.00023 11.5 2.2 1 1 0.00011 0.0032 7.8 2.2 129 180 140 191 3 203 0.55 # 16555 # 17187 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_12 - 184 HTH_3 PF01381.17 55 8.5e-07 20.0 0.0 1 1 6.1e-08 1.8e-06 19.0 0.0 4 31 154 181 151 183 0.88 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_21 - 160 TrmB PF01978.14 68 1.7e-08 25.3 0.0 1 1 4.2e-09 4e-08 24.1 0.0 1 58 38 95 38 108 0.93 # 19330 # 19809 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_12 - 184 TrmB PF01978.14 68 1.5e-06 19.1 0.0 1 1 2.8e-07 2.8e-06 18.2 0.0 20 44 157 181 151 182 0.89 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_3 - 152 TrmB PF01978.14 68 2.6e-05 15.1 0.4 1 1 4.7e-06 4.5e-05 14.3 0.4 20 65 53 98 39 101 0.87 # 2023 # 2478 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.281 1_22 - 448 NAD_binding_8 PF13450.1 68 2.8e-05 15.3 0.0 1 1 2e-06 5.8e-05 14.3 0.0 2 60 9 67 8 71 0.74 # 19796 # 21139 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331 1_12 - 184 HTH_26 PF13443.1 63 1.1e-05 16.8 0.0 1 1 1.1e-06 3.3e-05 15.3 0.0 7 34 156 183 150 183 0.87 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_2 - 213 HD PF01966.17 122 4.5e-09 27.6 0.1 1 2 4.1e-10 1.2e-08 26.2 0.1 2 97 32 121 31 156 0.81 # 954 # 1592 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_2 - 213 HD PF01966.17 122 4.5e-09 27.6 0.1 2 2 0.074 2.2 -0.5 0.0 30 49 125 144 124 178 0.68 # 954 # 1592 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_18 - 211 QRPTase_C PF01729.14 169 4.4e-05 14.2 2.9 1 2 0.0015 0.042 4.5 0.5 88 130 65 108 34 137 0.68 # 16555 # 17187 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_18 - 211 QRPTase_C PF01729.14 169 4.4e-05 14.2 2.9 2 2 6.6e-06 0.00019 12.1 0.4 66 158 92 190 84 195 0.66 # 16555 # 17187 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_3 - 152 Rrf2 PF02082.15 83 1.5e-05 16.3 0.1 1 1 2e-06 2.9e-05 15.4 0.1 18 56 51 86 41 89 0.84 # 2023 # 2478 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.281 1_21 - 160 Rrf2 PF02082.15 83 0.00014 13.1 0.0 1 1 2.6e-05 0.00038 11.8 0.0 14 57 49 91 36 93 0.82 # 19330 # 19809 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310 1_27 - 313 RepA_N PF06970.6 76 2.1e-34 108.4 6.9 1 1 7.3e-36 2.1e-34 108.4 6.9 1 76 15 90 15 90 0.99 # 25323 # 26261 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.291 1_18 - 211 G3P_antiterm PF04309.7 175 0.00011 12.4 3.9 1 3 0.035 1 -0.5 0.0 154 167 69 82 19 97 0.74 # 16555 # 17187 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_18 - 211 G3P_antiterm PF04309.7 175 0.00011 12.4 3.9 2 3 0.0026 0.075 3.2 0.2 13 59 71 118 62 138 0.71 # 16555 # 17187 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_18 - 211 G3P_antiterm PF04309.7 175 0.00011 12.4 3.9 3 3 2e-05 0.00057 10.1 0.2 119 165 160 206 145 209 0.76 # 16555 # 17187 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_12 - 184 HTH_32 PF13565.1 77 4.6e-09 28.2 0.5 1 2 0.091 2.6 0.1 0.0 26 48 37 68 16 89 0.55 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 1_12 - 184 HTH_32 PF13565.1 77 4.6e-09 28.2 0.5 2 2 8.4e-10 2.4e-08 25.9 0.2 12 77 126 180 118 180 0.73 # 12959 # 13510 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.350 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/93ca8841-e2fb-4a44-823f-740153286846 # Target file: checkm_output/bins/pGCA_001558375.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001558375.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/93ca8841-e2fb-4a44-823f-740153286846 checkm_output/bins/pGCA_001558375.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/Staphylococcus/training_20210111 # Date: Mon Jan 11 14:53:39 2021 # [ok]