# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_6 - 111 HTH_12 PF08461.5 66 6.3e-05 15.0 0.2 1 1 2.4e-06 0.00015 13.8 0.2 22 54 41 73 38 102 0.85 # 5943 # 6275 # 1 # ID=1_6;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 2_8 - 359 DUF204 PF02659.10 67 4.5e-05 15.8 0.9 1 1 1.4e-06 8.7e-05 14.9 0.9 5 50 4 51 4 58 0.78 # 6325 # 7401 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.391 2_6 - 671 DUF258 PF03193.11 161 3.3e-05 15.4 1.2 1 2 0.027 1.7 0.0 0.1 70 119 205 254 194 259 0.81 # 3003 # 5015 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.286 2_6 - 671 DUF258 PF03193.11 161 3.3e-05 15.4 1.2 2 2 1.9e-06 0.00012 13.6 0.6 32 56 255 278 232 357 0.74 # 3003 # 5015 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.286 1_16 - 554 Peptidase_M56 PF05569.6 299 5.6e-88 286.9 12.0 1 1 1.9e-89 1.2e-87 285.8 12.0 32 299 2 266 1 266 0.99 # 14510 # 16171 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 1_21 - 575 Peptidase_MA_2 PF13485.1 128 0.00019 13.7 0.0 1 1 6.6e-06 0.00042 12.6 0.0 2 40 193 230 192 273 0.84 # 19751 # 21475 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.271 2_6 - 671 AAA_18 PF13238.1 129 0.00025 13.7 2.0 1 2 3.7e-05 0.0023 10.5 1.1 2 91 261 398 261 402 0.63 # 3003 # 5015 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.286 2_6 - 671 AAA_18 PF13238.1 129 0.00025 13.7 2.0 2 2 0.05 3.2 0.4 0.0 43 90 402 452 383 469 0.61 # 3003 # 5015 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.286 1_14 - 198 MarR_2 PF12802.2 62 8.3e-07 20.9 0.0 1 2 0.0059 0.37 2.8 0.1 23 45 112 134 101 137 0.86 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 1_14 - 198 MarR_2 PF12802.2 62 8.3e-07 20.9 0.0 2 2 5.9e-07 3.7e-05 15.6 0.0 7 48 149 187 144 188 0.91 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 2_14 - 131 tRNA_anti-codon PF01336.20 75 1.4e-05 17.2 0.1 1 1 3.4e-07 2.2e-05 16.6 0.1 23 65 39 81 9 99 0.82 # 13143 # 13535 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.288 1_29 - 100 HTH_17 PF12728.2 51 0.00067 12.2 4.1 1 1 9.8e-05 0.0031 10.1 4.2 12 41 41 78 26 95 0.82 # 27684 # 27983 # 1 # ID=1_29;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.340 2_16 - 100 HTH_17 PF12728.2 51 0.0011 11.6 4.8 1 1 0.00016 0.005 9.4 4.9 12 41 41 78 26 95 0.82 # 13797 # 14096 # 1 # ID=2_16;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_12 - 272 AAA_22 PF13401.1 131 1.5e-28 91.8 0.0 1 1 8.1e-30 2.5e-28 91.1 0.0 2 131 25 171 24 171 0.87 # 11061 # 11876 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.301 2_6 - 671 AAA_22 PF13401.1 131 0.00013 14.3 0.0 1 1 5.7e-05 0.0018 10.7 0.0 7 34 260 286 254 398 0.82 # 3003 # 5015 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.286 1_27 - 87 HTH_19 PF12844.2 64 1.6e-10 33.2 0.0 1 1 3.2e-12 2e-10 32.9 0.0 4 55 17 69 16 78 0.91 # 25965 # 26225 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.326 1_2 - 469 NAD_binding_2 PF03446.10 163 6e-49 158.3 0.0 1 1 1.5e-50 9.5e-49 157.6 0.0 2 163 3 174 2 174 0.97 # 1701 # 3107 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.348 2_6 - 671 FtsK_SpoIIIE PF01580.13 205 0.00018 13.3 0.0 1 1 5.8e-06 0.00037 12.2 0.0 35 78 249 293 229 299 0.78 # 3003 # 5015 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.286 1_14 - 198 Mga PF05043.8 87 2.2e-06 20.2 0.4 1 2 0.0074 0.46 3.1 0.1 24 52 104 132 74 137 0.83 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 1_14 - 198 Mga PF05043.8 87 2.2e-06 20.2 0.4 2 2 1.6e-06 0.0001 14.9 0.0 17 55 148 185 144 187 0.92 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 1_14 - 198 HTH_30 PF13556.1 59 0.00019 13.3 0.0 1 1 6.2e-06 0.00039 12.3 0.0 3 38 151 186 150 187 0.94 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 2_10 - 701 TIGR00615 TIGR00615 196 1.4e-06 19.8 0.1 1 1 5.8e-08 3.6e-06 18.5 0.1 123 171 89 138 80 156 0.86 # 7912 # 10014 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.272 2_14 - 131 tRNA_anti_2 PF13742.1 99 0.00032 12.8 0.0 1 1 6.8e-06 0.00043 12.4 0.0 37 87 23 79 9 88 0.79 # 13143 # 13535 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.288 1_27 - 87 HTH_31 PF13560.1 64 1.4e-09 30.4 0.0 1 1 2.5e-11 1.6e-09 30.2 0.0 7 57 18 68 15 82 0.91 # 25965 # 26225 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.326 1_14 - 198 HTH_22 PF13309.1 64 8.6e-08 24.2 0.3 1 2 0.013 0.82 1.8 0.0 23 38 70 85 64 86 0.87 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 1_14 - 198 HTH_22 PF13309.1 64 8.6e-08 24.2 0.3 2 2 7.7e-08 4.9e-06 18.6 0.1 13 64 137 182 129 182 0.77 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 2_12 - 547 T4SS-DNA_transf PF02534.9 469 8.4e-149 488.3 4.4 1 1 1.3e-150 8.4e-149 488.3 4.4 3 468 3 462 1 463 0.97 # 10491 # 12131 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.297 2_10 - 701 Toprim_Crpt PF13342.1 62 5.1e-18 56.8 18.0 1 3 0.0066 0.42 2.6 0.5 31 58 216 242 211 250 0.70 # 7912 # 10014 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.272 2_10 - 701 Toprim_Crpt PF13342.1 62 5.1e-18 56.8 18.0 2 3 0.0019 0.12 4.4 0.3 11 37 428 456 423 460 0.84 # 7912 # 10014 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.272 2_10 - 701 Toprim_Crpt PF13342.1 62 5.1e-18 56.8 18.0 3 3 1.1e-19 6.8e-18 56.4 5.3 1 61 639 700 639 700 0.98 # 7912 # 10014 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.272 2_14 - 131 SSB PF00436.20 104 2.5e-25 80.7 0.1 1 1 5.1e-27 3.2e-25 80.3 0.1 1 87 2 82 2 94 0.93 # 13143 # 13535 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.288 1_7 - 222 MULE PF10551.4 93 3.4e-05 16.3 0.1 1 1 2.8e-06 8.7e-05 15.0 0.0 19 76 92 146 64 165 0.83 # 6448 # 7113 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.347 7_1 - 129 MULE PF10551.4 93 0.00014 14.3 0.0 1 1 6.5e-06 0.00021 13.8 0.0 29 77 4 51 1 67 0.82 # 61 # 447 # -1 # ID=7_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.344 2_16 - 100 HEM4 PF02602.10 231 8.8e-05 14.0 0.0 1 1 6.3e-06 0.0001 13.9 0.0 124 155 23 54 8 71 0.78 # 13797 # 14096 # 1 # ID=2_16;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_29 - 100 HEM4 PF02602.10 231 0.00027 12.4 0.0 1 1 1.9e-05 0.0003 12.3 0.0 124 155 23 54 8 71 0.78 # 27684 # 27983 # 1 # ID=1_29;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.340 1_8 - 225 HEM4 PF02602.10 231 0.00033 12.2 0.0 1 1 3.3e-05 0.00052 11.5 0.0 125 155 24 54 9 70 0.80 # 7644 # 8318 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.351 1_7 - 222 HEM4 PF02602.10 231 0.00035 12.1 0.0 1 1 3.2e-05 0.00051 11.6 0.0 125 155 24 54 9 70 0.80 # 6448 # 7113 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.347 1_14 - 198 HTH_36 PF13730.1 55 1.4e-05 17.5 0.1 1 1 4.6e-07 2.9e-05 16.5 0.1 28 52 163 187 143 188 0.90 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 1_15 - 127 Penicillinase_R PF03965.11 115 7e-37 118.3 1.0 1 1 1.3e-38 7.9e-37 118.2 1.0 1 114 8 121 8 122 0.99 # 14140 # 14520 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.257 3_1 - 135 Acetyltransf_4 PF13420.1 155 2.5e-07 23.0 0.1 1 1 8.7e-09 2.7e-07 22.9 0.1 41 133 21 114 1 130 0.82 # 547 # 951 # 1 # ID=3_1;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.249 3_2 - 496 Acetyltransf_4 PF13420.1 155 1.3e-06 20.7 0.2 1 2 4.2e-08 1.3e-06 20.7 0.2 1 143 10 162 10 171 0.81 # 952 # 2439 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.243 3_2 - 496 Acetyltransf_4 PF13420.1 155 1.3e-06 20.7 0.2 2 2 0.057 1.8 0.7 0.1 84 115 175 206 160 208 0.79 # 952 # 2439 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.243 2_8 - 359 T2SF PF00482.18 124 0.0022 10.2 5.1 1 1 7e-05 0.0044 9.2 5.1 92 123 12 43 10 44 0.93 # 6325 # 7401 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.391 1_6 - 111 PadR PF03551.9 75 0.00029 12.9 0.1 1 1 6.8e-06 0.00043 12.3 0.1 29 70 49 88 36 93 0.81 # 5943 # 6275 # 1 # ID=1_6;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_2 - 469 NAD_Gly3P_dh_N PF01210.18 157 6.4e-05 15.0 0.0 1 1 4e-06 0.00025 13.0 0.0 2 47 5 50 4 66 0.78 # 1701 # 3107 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.348 1_2 - 469 3HCDH_N PF02737.13 180 6.7e-05 14.8 0.0 1 1 1.9e-06 0.00012 14.0 0.0 1 42 4 45 4 74 0.89 # 1701 # 3107 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.348 1_8 - 225 AAA_17 PF13207.1 121 5e-05 16.4 0.9 1 1 2.3e-06 7.2e-05 15.9 0.9 23 113 24 122 20 205 0.83 # 7644 # 8318 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.351 1_7 - 222 AAA_17 PF13207.1 121 0.00028 14.0 0.9 1 1 1.5e-05 0.00047 13.3 0.9 23 112 24 121 20 177 0.80 # 6448 # 7113 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.347 1_2 - 469 IlvN PF07991.7 165 0.00029 12.5 0.1 1 1 2.5e-05 0.0016 10.1 0.0 5 48 3 46 1 61 0.84 # 1701 # 3107 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.348 3_1 - 135 MOZ_SAS PF01853.13 189 4.1e-05 15.1 0.1 1 1 9.4e-07 5.9e-05 14.6 0.1 81 112 59 90 15 96 0.83 # 547 # 951 # 1 # ID=3_1;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.249 1_13 - 481 HTH_29 PF13551.1 112 3.6e-07 22.6 0.1 1 1 4.1e-08 1.3e-06 20.8 0.0 14 76 35 96 30 117 0.81 # 11869 # 13311 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.322 1_14 - 198 HTH_29 PF13551.1 112 3.5e-06 19.4 0.5 1 2 0.061 1.9 1.0 0.2 33 63 122 150 119 157 0.69 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 1_14 - 198 HTH_29 PF13551.1 112 3.5e-06 19.4 0.5 2 2 2.2e-06 7e-05 15.3 0.0 7 39 156 187 152 192 0.90 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 1_15 - 127 MarR PF01047.17 59 6.9e-08 24.4 0.1 1 1 5.8e-09 1.2e-07 23.7 0.1 1 54 8 65 8 65 0.96 # 14140 # 14520 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.257 1_14 - 198 MarR PF01047.17 59 7.7e-06 17.9 0.1 1 1 9.2e-07 1.9e-05 16.6 0.0 4 45 148 188 145 188 0.87 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 1_6 - 111 MarR PF01047.17 59 0.00018 13.5 0.1 1 1 1.2e-05 0.00026 13.0 0.1 18 49 37 69 26 72 0.88 # 5943 # 6275 # 1 # ID=1_6;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_14 - 198 HTH_20 PF12840.2 61 0.0002 13.4 0.0 1 1 1.8e-05 0.0011 11.0 0.0 15 50 152 186 146 189 0.90 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 1_14 - 198 Terminase_5 PF06056.7 58 0.00016 13.5 0.1 1 1 4.8e-06 0.0003 12.6 0.1 7 36 154 183 153 194 0.88 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 3_2 - 496 Acetyltransf_3 PF13302.1 142 2.1e-16 52.6 0.1 1 1 2.2e-17 7e-16 50.9 0.0 2 142 8 154 7 154 0.85 # 952 # 2439 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.243 3_1 - 135 Acetyltransf_3 PF13302.1 142 6.4e-10 31.6 0.0 1 1 2.4e-11 7.7e-10 31.4 0.0 56 141 28 115 6 116 0.79 # 547 # 951 # 1 # ID=3_1;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.249 3_1 - 135 FR47 PF08445.5 86 7e-09 27.7 0.0 1 1 1.4e-10 9.1e-09 27.3 0.0 23 82 60 120 30 125 0.81 # 547 # 951 # 1 # ID=3_1;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.249 1_14 - 198 HTH_24 PF13412.1 48 1.1e-10 33.1 0.2 1 1 3.2e-12 2e-10 32.2 0.2 1 44 145 187 145 188 0.97 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 1_4 - 211 TIGR01740 TIGR01740 216 4.2e-19 61.0 8.7 1 1 5.8e-20 3.6e-18 57.9 8.7 3 215 5 203 3 204 0.78 # 4671 # 5303 # 1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.343 1_4 - 211 OMPdecase PF00215.19 226 2e-34 111.2 7.2 1 1 3.9e-36 2.5e-34 110.9 7.2 2 225 2 202 1 203 0.92 # 4671 # 5303 # 1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.343 1_8 - 225 DDE_Tnp_IS240 PF13610.1 140 4.8e-44 142.0 2.3 1 1 7.5e-45 6.8e-44 141.5 2.3 3 139 72 203 70 204 0.95 # 7644 # 8318 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.351 1_7 - 222 DDE_Tnp_IS240 PF13610.1 140 8.9e-44 141.1 1.6 1 1 1.4e-44 1.2e-43 140.7 1.6 3 138 72 202 70 204 0.94 # 6448 # 7113 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.347 8_1 - 80 DDE_Tnp_IS240 PF13610.1 140 3.6e-29 93.8 0.5 1 1 4.5e-30 4.1e-29 93.6 0.5 3 69 14 79 12 80 0.97 # 1 # 240 # 1 # ID=8_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.342 7_1 - 129 DDE_Tnp_IS240 PF13610.1 140 3e-26 84.3 0.7 1 1 3.9e-27 3.5e-26 84.1 0.7 28 139 1 107 1 108 0.94 # 61 # 447 # -1 # ID=7_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.344 2_16 - 100 DDE_Tnp_IS240 PF13610.1 140 4.3e-15 48.2 1.3 1 1 8.5e-16 7.6e-15 47.4 1.3 3 31 72 100 70 100 0.95 # 13797 # 14096 # 1 # ID=2_16;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_29 - 100 DDE_Tnp_IS240 PF13610.1 140 4.5e-15 48.1 1.3 1 1 8.5e-16 7.6e-15 47.4 1.3 3 31 72 100 70 100 0.95 # 27684 # 27983 # 1 # ID=1_29;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.340 3_3 - 152 DDE_Tnp_IS240 PF13610.1 140 2.5e-05 16.5 0.2 1 1 4.6e-06 4.1e-05 15.8 0.1 69 128 67 130 38 135 0.73 # 2521 # 2976 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.351 1_13 - 481 HTH_Tnp_Mu_2 PF09039.6 108 0.00017 13.6 0.1 1 2 1.4e-05 0.00089 11.3 0.0 37 102 84 148 57 155 0.81 # 11869 # 13311 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.322 1_13 - 481 HTH_Tnp_Mu_2 PF09039.6 108 0.00017 13.6 0.1 2 2 0.098 6.2 -1.1 0.0 28 51 306 329 290 332 0.76 # 11869 # 13311 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.322 1_4 - 211 Pterin_bind PF00809.17 210 4.8e-06 18.3 1.4 1 2 0.042 2.7 -0.5 0.0 129 134 45 50 4 85 0.44 # 4671 # 5303 # 1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.343 1_4 - 211 Pterin_bind PF00809.17 210 4.8e-06 18.3 1.4 2 2 1.7e-07 1.1e-05 17.1 0.2 84 166 95 173 89 174 0.87 # 4671 # 5303 # 1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.343 1_14 - 198 HTH_IclR PF09339.5 52 3.8e-05 15.5 0.0 1 1 1.7e-06 0.00011 14.1 0.0 7 43 151 185 148 187 0.85 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 1_14 - 198 HTH_7 PF02796.10 45 5.4e-21 66.5 0.1 1 1 1.9e-22 1.2e-20 65.4 0.1 1 44 140 183 140 184 0.98 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 3_2 - 496 Acetyltransf_8 PF13523.1 152 5.5e-22 70.5 0.0 1 1 3.2e-23 1e-21 69.7 0.0 3 139 12 156 10 163 0.90 # 952 # 2439 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.243 3_1 - 135 Acetyltransf_8 PF13523.1 152 1.6e-07 23.6 0.0 1 1 6.4e-09 2e-07 23.2 0.0 33 136 16 115 5 120 0.89 # 547 # 951 # 1 # ID=3_1;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.249 1_14 - 198 HTH_DeoR PF08220.7 57 0.00011 14.0 0.0 1 1 5.4e-06 0.00034 12.4 0.0 17 41 163 187 148 189 0.85 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 1_2 - 469 2-Hacid_dh_C PF02826.14 178 5e-05 14.7 0.0 1 1 2e-06 0.00013 13.5 0.0 37 147 3 120 1 138 0.74 # 1701 # 3107 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.348 6_1 - 141 DegV PF02645.11 280 5.2e-46 149.1 4.1 1 1 9.6e-48 6e-46 148.9 4.1 4 134 6 133 3 137 0.94 # 117 # 539 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.329 1_14 - 198 Phage_antitermQ PF06530.7 126 0.00029 12.7 0.0 1 2 0.028 1.8 0.5 0.0 52 94 58 100 37 112 0.82 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 1_14 - 198 Phage_antitermQ PF06530.7 126 0.00029 12.7 0.0 2 2 3.4e-05 0.0022 9.9 0.0 62 103 144 185 140 191 0.90 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 2_6 - 671 AAA_14 PF13173.1 128 0.0029 9.8 11.0 1 3 8.7e-05 0.0055 8.9 0.8 2 40 257 294 256 402 0.78 # 3003 # 5015 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.286 2_6 - 671 AAA_14 PF13173.1 128 0.0029 9.8 11.0 2 3 0.003 0.19 3.9 0.9 16 91 450 531 446 554 0.66 # 3003 # 5015 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.286 2_6 - 671 AAA_14 PF13173.1 128 0.0029 9.8 11.0 3 3 0.046 2.9 0.1 0.0 28 57 608 636 592 653 0.73 # 3003 # 5015 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.286 1_12 - 272 AAA PF00004.24 132 3.4e-06 19.6 0.0 1 2 0.00028 0.018 7.5 0.0 3 14 32 43 31 58 0.89 # 11061 # 11876 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.301 1_12 - 272 AAA PF00004.24 132 3.4e-06 19.6 0.0 2 2 6.1e-05 0.0038 9.7 0.0 34 111 110 167 64 189 0.83 # 11061 # 11876 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.301 2_6 - 671 AAA_10 PF12846.2 304 1.3e-56 184.5 2.4 1 1 7.5e-58 2.4e-56 183.6 2.4 1 301 257 584 257 586 0.91 # 3003 # 5015 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.286 2_12 - 547 AAA_10 PF12846.2 304 5.4e-09 28.1 0.1 1 1 5.3e-10 1.7e-08 26.5 0.1 1 300 31 368 31 371 0.69 # 10491 # 12131 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.297 1_12 - 272 DEAD PF00270.24 169 0.00096 10.9 1.7 1 1 4.1e-05 0.0026 9.5 1.0 113 143 121 151 30 164 0.79 # 11061 # 11876 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.301 2_6 - 671 AAA_16 PF13191.1 185 8.1e-05 14.9 0.0 1 1 1.2e-05 0.00074 11.8 0.0 25 52 258 293 244 532 0.74 # 3003 # 5015 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.286 1_6 - 111 HxlR PF01638.12 91 2.2e-32 102.9 0.3 1 1 4.1e-34 2.6e-32 102.7 0.3 1 89 18 107 18 109 0.96 # 5943 # 6275 # 1 # ID=1_6;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.321 1_14 - 198 HTH_23 PF13384.1 50 6.5e-08 24.4 0.0 1 1 1.5e-08 1.6e-07 23.1 0.0 13 43 156 185 151 193 0.87 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 1_13 - 481 HTH_23 PF13384.1 50 1.4e-06 20.2 0.0 1 1 3e-07 3.1e-06 19.0 0.0 2 49 17 65 16 66 0.88 # 11869 # 13311 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.322 1_29 - 100 HTH_23 PF13384.1 50 9.3e-06 17.5 3.0 1 2 0.087 0.91 1.7 0.0 18 27 26 35 17 38 0.81 # 27684 # 27983 # 1 # ID=1_29;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.340 1_29 - 100 HTH_23 PF13384.1 50 9.3e-06 17.5 3.0 2 2 5.7e-06 6e-05 15.0 0.9 28 41 41 54 40 70 0.93 # 27684 # 27983 # 1 # ID=1_29;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.340 2_16 - 100 HTH_23 PF13384.1 50 1.2e-05 17.2 3.0 1 1 5.7e-06 6e-05 15.0 0.9 28 41 41 54 40 70 0.93 # 13797 # 14096 # 1 # ID=2_16;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_8 - 225 HTH_23 PF13384.1 50 1.3e-05 17.1 1.9 1 1 1.4e-05 0.00015 13.7 0.6 28 41 41 54 40 69 0.92 # 7644 # 8318 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.351 1_7 - 222 HTH_23 PF13384.1 50 3.5e-05 15.7 2.8 1 1 1.4e-05 0.00015 13.7 0.6 28 41 41 54 40 69 0.92 # 6448 # 7113 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.347 1_24 - 78 Fun_ATP-synt_8 PF05933.8 48 7.2e-05 15.1 5.4 1 2 1.1e-06 7.2e-05 15.1 5.4 7 40 22 55 20 57 0.97 # 24093 # 24326 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_24 - 78 Fun_ATP-synt_8 PF05933.8 48 7.2e-05 15.1 5.4 2 2 0.073 4.6 -0.3 1.4 16 26 60 70 56 74 0.52 # 24093 # 24326 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 3_3 - 152 Transposase_mut PF00872.13 381 3.6e-43 139.7 0.4 1 1 6.6e-45 4.2e-43 139.5 0.4 248 380 8 141 2 142 0.96 # 2521 # 2976 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.351 3_1 - 135 Acetyltransf_7 PF13508.1 79 1.7e-13 42.9 0.1 1 1 9.4e-15 3e-13 42.1 0.1 6 76 33 114 30 114 0.86 # 547 # 951 # 1 # ID=3_1;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.249 3_2 - 496 Acetyltransf_7 PF13508.1 79 2.8e-07 22.9 1.1 1 2 6.3e-08 2e-06 20.2 0.2 7 78 62 154 55 155 0.74 # 952 # 2439 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.243 3_2 - 496 Acetyltransf_7 PF13508.1 79 2.8e-07 22.9 1.1 2 2 0.081 2.5 0.6 0.0 34 74 412 475 378 476 0.51 # 952 # 2439 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.243 1_14 - 198 UPF0122 PF04297.9 101 2.4e-05 16.6 0.2 1 1 1.1e-06 7e-05 15.1 0.1 18 59 145 186 142 190 0.92 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 1_21 - 575 DUF955 PF06114.8 122 4.3e-05 15.5 0.1 1 1 2.5e-06 0.00016 13.7 0.1 21 80 196 252 177 258 0.81 # 19751 # 21475 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.271 1_15 - 127 S-AdoMet_synt_M PF02772.11 120 0.00044 12.5 1.9 1 2 1.6e-05 0.001 11.3 0.9 65 106 22 62 3 74 0.77 # 14140 # 14520 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.257 1_15 - 127 S-AdoMet_synt_M PF02772.11 120 0.00044 12.5 1.9 2 2 0.043 2.7 0.3 0.0 63 90 88 115 69 126 0.62 # 14140 # 14520 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.257 3_1 - 135 Acetyltransf_10 PF13673.1 117 1.7e-08 26.9 0.0 1 1 3.3e-10 2.1e-08 26.6 0.0 31 116 17 114 4 114 0.83 # 547 # 951 # 1 # ID=3_1;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.249 2_10 - 701 TIGR01051 TIGR01051 632 8.1e-62 201.9 15.6 1 1 3.6e-63 2.2e-61 200.4 15.6 26 620 46 635 41 648 0.80 # 7912 # 10014 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.272 1_4 - 211 Ribul_P_3_epim PF00834.14 201 2.1e-07 22.5 3.0 1 1 9.7e-08 6.1e-06 17.7 3.0 67 200 64 193 25 194 0.73 # 4671 # 5303 # 1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.343 1_14 - 198 HTH_11 PF08279.7 55 1.8e-08 26.2 0.0 1 1 7.2e-10 4.5e-08 25.0 0.0 4 41 151 186 148 189 0.84 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 2_16 - 100 Arg_repressor PF01316.16 70 8.2e-05 14.4 0.0 1 1 5.9e-06 0.00012 13.9 0.0 24 48 30 54 25 76 0.79 # 13797 # 14096 # 1 # ID=2_16;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_8 - 225 Arg_repressor PF01316.16 70 0.00013 13.8 0.0 1 1 1.9e-05 0.0004 12.2 0.0 24 51 30 57 25 77 0.78 # 7644 # 8318 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.351 1_7 - 222 Arg_repressor PF01316.16 70 0.00017 13.5 0.0 1 1 1.9e-05 0.00039 12.3 0.0 24 51 30 57 25 77 0.78 # 6448 # 7113 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.347 2_12 - 547 TrwB_AAD_bind PF10412.4 386 2.8e-25 80.9 0.0 1 2 1.2e-05 0.00036 11.4 0.0 12 121 28 144 23 171 0.79 # 10491 # 12131 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.297 2_12 - 547 TrwB_AAD_bind PF10412.4 386 2.8e-25 80.9 0.0 2 2 1.3e-22 4e-21 67.2 0.0 219 377 260 424 207 431 0.86 # 10491 # 12131 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.297 2_6 - 671 TrwB_AAD_bind PF10412.4 386 2.4e-09 28.5 1.0 1 2 9.5e-07 3e-05 15.0 0.0 10 61 252 305 244 356 0.78 # 3003 # 5015 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.286 2_6 - 671 TrwB_AAD_bind PF10412.4 386 2.4e-09 28.5 1.0 2 2 1.7e-05 0.00054 10.8 0.0 237 316 495 577 480 603 0.75 # 3003 # 5015 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.286 1_13 - 481 HTH_28 PF13518.1 52 2.2e-11 35.9 0.0 1 1 1.4e-11 1.5e-10 33.3 0.1 1 45 21 66 21 73 0.94 # 11869 # 13311 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.322 1_14 - 198 HTH_28 PF13518.1 52 5e-05 15.6 0.0 1 1 1.2e-05 0.00013 14.3 0.0 8 37 156 185 155 190 0.92 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 1_8 - 225 HTH_28 PF13518.1 52 6.2e-05 15.3 0.4 1 1 2.4e-05 0.00025 13.3 0.4 15 36 31 54 17 55 0.80 # 7644 # 8318 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.351 1_7 - 222 HTH_28 PF13518.1 52 7.1e-05 15.1 0.4 1 1 2.4e-05 0.00025 13.4 0.4 15 36 31 54 17 55 0.80 # 6448 # 7113 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.347 2_16 - 100 HTH_28 PF13518.1 52 7.1e-05 15.1 0.5 1 1 6.8e-06 7.1e-05 15.1 0.5 15 36 31 54 17 55 0.80 # 13797 # 14096 # 1 # ID=2_16;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_29 - 100 HTH_28 PF13518.1 52 0.00026 13.3 0.3 1 1 2.5e-05 0.00026 13.3 0.3 23 36 41 54 17 55 0.91 # 27684 # 27983 # 1 # ID=1_29;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.340 2_3 - 106 Colicin_V PF02674.11 146 5.8e-05 15.2 1.8 1 1 1.2e-06 7.4e-05 14.9 1.8 53 123 23 104 5 105 0.75 # 1528 # 1845 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.358 1_29 - 100 HTH_Tnp_4 PF13613.1 53 2.2e-05 16.3 0.4 1 1 8.1e-06 0.0001 14.1 0.4 30 49 41 60 17 63 0.81 # 27684 # 27983 # 1 # ID=1_29;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.340 2_16 - 100 HTH_Tnp_4 PF13613.1 53 2.3e-05 16.2 0.5 1 1 8.8e-06 0.00011 14.0 0.5 30 49 41 60 17 63 0.82 # 13797 # 14096 # 1 # ID=2_16;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_14 - 198 HTH_Tnp_4 PF13613.1 53 6.4e-05 14.8 0.0 1 1 1.1e-05 0.00013 13.7 0.0 24 45 165 186 159 187 0.90 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 1_7 - 222 HTH_Tnp_4 PF13613.1 53 0.00021 13.1 0.3 1 1 6e-05 0.00076 11.3 0.3 30 49 41 60 18 63 0.84 # 6448 # 7113 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.347 1_8 - 225 HTH_Tnp_4 PF13613.1 53 0.00022 13.1 0.3 1 1 6.1e-05 0.00076 11.3 0.3 30 49 41 60 18 63 0.84 # 7644 # 8318 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.351 3_1 - 135 GNAT_acetyltr_2 PF13718.1 196 0.00045 11.8 0.0 1 1 9e-06 0.00056 11.5 0.0 96 121 64 89 61 118 0.87 # 547 # 951 # 1 # ID=3_1;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.249 2_10 - 701 Octopine_DH PF02317.12 152 0.00047 12.1 1.2 1 1 2.7e-05 0.0017 10.3 0.3 52 118 271 335 231 353 0.82 # 7912 # 10014 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.272 1_4 - 211 HMGL-like PF00682.14 237 6.6e-10 31.2 1.4 1 2 3.3e-07 2.1e-05 16.5 0.6 5 113 4 110 3 116 0.81 # 4671 # 5303 # 1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.343 1_4 - 211 HMGL-like PF00682.14 237 6.6e-10 31.2 1.4 2 2 7.3e-07 4.6e-05 15.4 0.0 5 69 105 173 101 186 0.87 # 4671 # 5303 # 1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.343 5_3 - 297 TIGR03082 TIGR03082 157 0.0005 11.9 15.6 1 2 0.0078 0.49 2.1 8.1 26 121 99 192 53 207 0.86 # 277 # 1167 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.274 5_3 - 297 TIGR03082 TIGR03082 157 0.0005 11.9 15.6 2 2 2.1e-05 0.0013 10.5 0.8 22 90 224 293 220 295 0.89 # 277 # 1167 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.274 5_3 - 297 TauE PF01925.14 240 1.7e-27 88.6 18.5 1 1 3.5e-29 2.2e-27 88.2 18.5 2 239 58 291 56 292 0.81 # 277 # 1167 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.274 1_4 - 211 PRAI PF00697.17 197 7.5e-05 14.6 3.7 1 1 8.1e-06 0.00051 11.9 3.7 93 179 78 190 64 194 0.53 # 4671 # 5303 # 1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.343 2_6 - 671 DUF87 PF01935.12 229 2.8e-11 35.9 5.0 1 2 0.01 0.66 1.9 0.4 121 191 103 185 53 197 0.66 # 3003 # 5015 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.286 2_6 - 671 DUF87 PF01935.12 229 2.8e-11 35.9 5.0 2 2 4.4e-13 2.8e-11 35.9 5.0 19 209 253 454 237 485 0.68 # 3003 # 5015 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.286 1_13 - 481 rve_3 PF13683.1 67 7.8e-06 17.7 0.2 1 1 7.8e-07 4.9e-05 15.1 0.1 2 34 258 290 257 332 0.82 # 11869 # 13311 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.322 1_5 - 184 TIGR01135 TIGR01135 607 8.5e-08 22.9 0.0 1 1 1.7e-09 1.1e-07 22.6 0.0 280 393 25 134 4 140 0.84 # 5303 # 5854 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.344 1_14 - 198 TetR_N PF00440.18 47 0.00032 12.6 0.1 1 1 2.1e-05 0.0013 10.6 0.0 16 36 160 180 158 180 0.92 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 1_4 - 211 TMP-TENI PF02581.12 180 1.3e-05 16.7 1.9 1 1 1.2e-06 7.4e-05 14.2 1.9 100 176 111 186 3 190 0.76 # 4671 # 5303 # 1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.343 1_13 - 481 rve PF00665.21 120 2.7e-26 84.3 0.0 1 1 6.1e-27 5.4e-26 83.3 0.0 1 119 155 285 155 286 0.88 # 11869 # 13311 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.322 1_8 - 225 rve PF00665.21 120 3.4e-17 55.0 0.7 1 1 2.4e-17 2.2e-16 52.4 0.4 2 117 66 174 65 176 0.92 # 7644 # 8318 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.351 1_7 - 222 rve PF00665.21 120 1.3e-16 53.0 0.7 1 1 9.5e-17 8.6e-16 50.4 0.4 2 117 66 174 65 176 0.92 # 6448 # 7113 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.347 8_1 - 80 rve PF00665.21 120 9.5e-13 40.6 0.1 1 1 1.1e-13 1e-12 40.5 0.1 2 77 8 78 7 80 0.91 # 1 # 240 # 1 # ID=8_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.342 7_1 - 129 rve PF00665.21 120 1.8e-09 30.1 0.1 1 1 2.9e-10 2.6e-09 29.5 0.1 41 117 7 78 2 80 0.89 # 61 # 447 # -1 # ID=7_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.344 2_16 - 100 rve PF00665.21 120 2.1e-06 20.2 0.1 1 2 0.069 0.62 2.5 0.0 83 102 30 49 6 52 0.87 # 13797 # 14096 # 1 # ID=2_16;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_16 - 100 rve PF00665.21 120 2.1e-06 20.2 0.1 2 2 4.8e-06 4.3e-05 15.9 0.0 2 33 66 95 65 99 0.87 # 13797 # 14096 # 1 # ID=2_16;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_29 - 100 rve PF00665.21 120 8.5e-06 18.2 0.1 1 1 4.8e-06 4.3e-05 15.9 0.0 2 33 66 95 65 99 0.87 # 27684 # 27983 # 1 # ID=1_29;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.340 1_4 - 211 PcrB PF01884.12 231 0.00031 12.3 9.1 1 2 0.015 0.97 0.8 1.7 196 217 69 90 7 105 0.48 # 4671 # 5303 # 1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.343 1_4 - 211 PcrB PF01884.12 231 0.00031 12.3 9.1 2 2 2.4e-06 0.00015 13.3 2.7 169 223 147 200 86 208 0.77 # 4671 # 5303 # 1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.343 1_13 - 481 HTH_Tnp_1 PF01527.15 76 3.5e-05 16.0 0.0 1 1 2.6e-06 8.2e-05 14.8 0.0 11 54 21 65 14 95 0.78 # 11869 # 13311 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.322 2_16 - 100 HTH_Tnp_1 PF01527.15 76 0.0014 10.9 2.0 1 1 0.00014 0.0043 9.3 2.0 24 47 29 54 5 76 0.77 # 13797 # 14096 # 1 # ID=2_16;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_14 - 198 HTH_38 PF13936.1 44 7.2e-06 17.8 0.0 1 1 3e-07 1.9e-05 16.5 0.0 11 41 151 181 142 183 0.86 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 3_1 - 135 Acetyltransf_1 PF00583.19 83 4.4e-20 63.8 0.0 1 1 1.8e-21 5.5e-20 63.5 0.0 2 81 36 114 35 116 0.95 # 547 # 951 # 1 # ID=3_1;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.249 3_2 - 496 Acetyltransf_1 PF00583.19 83 7e-14 44.0 0.0 1 1 4.4e-15 1.4e-13 43.0 0.0 2 83 64 154 63 154 0.92 # 952 # 2439 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.243 1_15 - 127 HTH_27 PF13463.1 68 0.0004 13.0 0.0 1 2 4e-05 0.0025 10.4 0.0 4 54 11 64 8 70 0.92 # 14140 # 14520 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.257 1_15 - 127 HTH_27 PF13463.1 68 0.0004 13.0 0.0 2 2 0.058 3.7 0.3 0.0 6 29 97 121 94 121 0.83 # 14140 # 14520 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.257 1_16 - 554 SprT-like PF10263.4 157 6.9e-05 14.8 0.0 1 1 2.6e-06 0.00017 13.6 0.0 7 71 113 174 108 177 0.85 # 14510 # 16171 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 1_14 - 198 HTH_Tnp_IS630 PF01710.11 120 8.1e-05 14.6 0.0 1 1 2.7e-06 0.00017 13.6 0.0 17 46 159 188 143 196 0.79 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 1_2 - 469 ApbA PF02558.11 151 1.9e-06 19.6 0.0 1 1 8.4e-08 5.3e-06 18.2 0.0 1 96 5 95 5 105 0.82 # 1701 # 3107 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.348 1_14 - 198 HTH_40 PF14493.1 91 6.2e-05 15.5 0.0 1 1 1.9e-06 0.00012 14.6 0.0 8 41 155 188 153 194 0.88 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 1_27 - 87 HTH_3 PF01381.17 55 7.4e-10 30.9 0.0 1 1 1.5e-11 9.6e-10 30.5 0.0 2 52 18 69 17 72 0.95 # 25965 # 26225 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.326 1_7 - 222 DDE_3 PF13358.1 146 2.7e-08 25.9 0.3 1 1 2.6e-09 5.5e-08 24.9 0.2 25 95 73 143 59 211 0.77 # 6448 # 7113 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.347 1_8 - 225 DDE_3 PF13358.1 146 4.6e-07 21.9 0.3 1 1 4e-08 8.5e-07 21.1 0.2 25 95 73 144 57 205 0.77 # 7644 # 8318 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.351 8_1 - 80 DDE_3 PF13358.1 146 5.7e-06 18.4 0.1 1 1 3.1e-07 6.5e-06 18.2 0.1 25 90 15 78 2 79 0.81 # 1 # 240 # 1 # ID=8_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.342 2_3 - 106 SecE PF00584.15 57 0.00064 11.6 0.1 1 3 0.019 1.2 1.1 0.3 27 39 8 20 3 26 0.72 # 1528 # 1845 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.358 2_3 - 106 SecE PF00584.15 57 0.00064 11.6 0.1 2 3 0.084 5.3 -1.0 0.1 31 38 47 54 34 63 0.54 # 1528 # 1845 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.358 2_3 - 106 SecE PF00584.15 57 0.00064 11.6 0.1 3 3 1e-05 0.00064 11.6 0.1 21 49 73 101 73 104 0.90 # 1528 # 1845 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.358 1_8 - 225 DDE_Tnp_IS66 PF03050.9 271 3.6e-08 25.1 1.2 1 2 2.3e-08 2.9e-07 22.1 0.4 16 97 21 96 7 137 0.75 # 7644 # 8318 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.351 1_8 - 225 DDE_Tnp_IS66 PF03050.9 271 3.6e-08 25.1 1.2 2 2 0.037 0.47 1.8 0.0 243 264 163 184 153 190 0.82 # 7644 # 8318 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.351 2_16 - 100 DDE_Tnp_IS66 PF03050.9 271 1.1e-07 23.6 0.3 1 1 9.5e-09 1.2e-07 23.4 0.3 15 94 20 93 7 99 0.78 # 13797 # 14096 # 1 # ID=2_16;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_29 - 100 DDE_Tnp_IS66 PF03050.9 271 3.1e-07 22.1 0.2 1 1 2.8e-08 3.5e-07 21.9 0.2 15 94 20 93 7 99 0.78 # 27684 # 27983 # 1 # ID=1_29;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.340 1_7 - 222 DDE_Tnp_IS66 PF03050.9 271 3.4e-07 21.9 4.6 1 2 2.9e-08 3.7e-07 21.8 1.5 16 98 21 101 7 137 0.71 # 6448 # 7113 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.347 1_7 - 222 DDE_Tnp_IS66 PF03050.9 271 3.4e-07 21.9 4.6 2 2 0.063 0.8 1.0 0.1 243 266 163 186 155 190 0.83 # 6448 # 7113 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.347 1_19 - 539 DDE_Tnp_IS66 PF03050.9 271 0.0002 12.8 0.4 1 1 2.7e-05 0.00035 12.1 0.4 145 248 291 402 277 419 0.79 # 17932 # 19548 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.249 1_14 - 198 TrmB PF01978.14 68 7.7e-07 21.1 0.0 1 1 5.6e-08 1.8e-06 19.9 0.0 22 49 160 187 145 189 0.82 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 2_10 - 701 TrmB PF01978.14 68 0.00022 13.2 0.1 1 3 0.078 2.5 0.2 0.0 45 62 265 288 262 292 0.83 # 7912 # 10014 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.272 2_10 - 701 TrmB PF01978.14 68 0.00022 13.2 0.1 2 3 0.00087 0.028 6.5 0.0 3 24 384 405 382 408 0.88 # 7912 # 10014 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.272 2_10 - 701 TrmB PF01978.14 68 0.00022 13.2 0.1 3 3 0.098 3.1 -0.1 0.0 41 59 517 535 506 539 0.80 # 7912 # 10014 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.272 1_2 - 469 6PGD PF00393.14 291 6.1e-142 464.2 0.1 1 1 1.2e-143 7.7e-142 463.9 0.1 1 290 178 465 178 466 1.00 # 1701 # 3107 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.348 1_1 - 487 G6PD_N PF00479.17 183 3e-59 192.6 0.4 1 1 4.7e-61 3e-59 192.6 0.4 1 183 10 186 10 186 0.97 # 177 # 1637 # -1 # ID=1_1;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.273 1_2 - 469 F420_oxidored PF03807.12 96 0.00019 14.1 0.0 1 1 1e-05 0.00064 12.5 0.0 1 47 4 46 4 100 0.77 # 1701 # 3107 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.348 1_4 - 211 QRPTase_C PF01729.14 169 0.00021 13.1 6.3 1 2 0.00067 0.042 5.6 1.9 69 131 43 109 35 136 0.63 # 4671 # 5303 # 1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.343 1_4 - 211 QRPTase_C PF01729.14 169 0.00021 13.1 6.3 2 2 5e-06 0.00031 12.5 1.6 66 155 92 187 86 195 0.65 # 4671 # 5303 # 1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.343 2_6 - 671 ABC_tran PF00005.22 137 0.00044 12.8 3.3 1 1 5e-05 0.0031 10.1 3.3 12 51 258 299 250 599 0.82 # 3003 # 5015 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.286 3_1 - 135 TIGR01575 TIGR01575 132 1.1e-11 37.0 0.0 1 1 4.2e-13 1.3e-11 36.7 0.0 35 113 33 116 6 130 0.83 # 547 # 951 # 1 # ID=3_1;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.249 3_2 - 496 TIGR01575 TIGR01575 132 9.1e-08 24.3 0.1 1 1 8.5e-09 2.7e-07 22.8 0.1 59 132 99 175 40 175 0.75 # 952 # 2439 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.243 1_16 - 554 Peptidase_M48 PF01435.13 226 0.00012 13.9 0.1 1 1 5.7e-06 0.00036 12.4 0.1 63 129 140 203 80 237 0.76 # 14510 # 16171 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 2_11 - 159 zf-DHHC PF01529.15 174 0.00048 11.8 1.5 1 1 1.1e-05 0.00066 11.3 1.5 96 159 5 89 4 103 0.82 # 10030 # 10506 # 1 # ID=2_11;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.275 3_1 - 135 Acetyltransf_9 PF13527.1 127 4.5e-05 15.6 0.0 1 1 9.5e-07 6e-05 15.2 0.0 43 123 32 114 11 114 0.86 # 547 # 951 # 1 # ID=3_1;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.249 1_14 - 198 Trp_repressor PF01371.14 88 1.9e-05 16.8 0.3 1 2 0.059 3.7 -0.1 0.1 3 33 87 117 85 124 0.83 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 1_14 - 198 Trp_repressor PF01371.14 88 1.9e-05 16.8 0.3 2 2 2.5e-06 0.00016 13.9 0.0 40 80 151 191 147 196 0.89 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 2_6 - 671 AAA_29 PF13555.1 62 3e-05 15.8 0.2 1 1 1.8e-06 0.00011 14.0 0.1 19 39 256 273 243 278 0.81 # 3003 # 5015 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.286 1_28 - 320 RepA_N PF06970.6 76 3.6e-38 121.5 1.1 1 1 2.7e-39 1.7e-37 119.4 1.1 1 76 14 89 14 89 0.99 # 26606 # 27565 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.258 1_4 - 211 G3P_antiterm PF04309.7 175 0.00014 13.2 5.9 1 3 0.02 1.2 0.3 0.1 118 167 26 82 6 86 0.53 # 4671 # 5303 # 1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.343 1_4 - 211 G3P_antiterm PF04309.7 175 0.00014 13.2 5.9 2 3 0.00071 0.045 5.0 0.4 12 69 70 133 61 138 0.72 # 4671 # 5303 # 1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.343 1_4 - 211 G3P_antiterm PF04309.7 175 0.00014 13.2 5.9 3 3 1.5e-05 0.00095 10.5 0.3 108 161 152 202 146 208 0.75 # 4671 # 5303 # 1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.343 1_13 - 481 LZ_Tnp_IS481 PF13011.1 85 8e-05 15.3 0.0 1 1 2.6e-06 0.00016 14.3 0.0 26 70 34 77 23 91 0.81 # 11869 # 13311 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.322 2_12 - 547 TraG-D_C PF12696.2 128 9.5e-38 121.2 0.1 1 1 1.5e-39 9.5e-38 121.2 0.1 1 127 289 413 289 414 0.90 # 10491 # 12131 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.297 2_10 - 701 zf-C4_Topoisom PF01396.14 39 9.6e-06 17.4 2.5 1 1 3.4e-07 2.1e-05 16.3 2.5 3 35 616 646 614 649 0.86 # 7912 # 10014 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.272 6_1 - 141 Dak1_2 PF13684.1 313 1.1e-05 16.7 0.1 1 1 2e-07 1.3e-05 16.5 0.1 111 185 44 124 1 132 0.70 # 117 # 539 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.329 1_7 - 222 HTH_32 PF13565.1 77 1.2e-07 24.7 0.1 1 2 1.9e-06 2e-05 17.7 0.1 49 76 26 50 11 51 0.86 # 6448 # 7113 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.347 1_7 - 222 HTH_32 PF13565.1 77 1.2e-07 24.7 0.1 2 2 0.021 0.22 4.7 0.0 30 63 138 171 88 183 0.78 # 6448 # 7113 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.347 1_8 - 225 HTH_32 PF13565.1 77 1.6e-07 24.3 0.2 1 2 1.9e-06 2e-05 17.6 0.1 49 76 26 50 11 51 0.86 # 7644 # 8318 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.351 1_8 - 225 HTH_32 PF13565.1 77 1.6e-07 24.3 0.2 2 2 0.024 0.25 4.5 0.0 30 63 138 171 99 183 0.73 # 7644 # 8318 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.351 1_13 - 481 HTH_32 PF13565.1 77 2.5e-07 23.7 0.0 1 1 6.5e-08 6.8e-07 22.3 0.0 1 74 49 123 49 126 0.79 # 11869 # 13311 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.322 2_16 - 100 HTH_32 PF13565.1 77 2.6e-06 20.5 0.1 1 1 4.3e-07 4.5e-06 19.7 0.1 48 76 25 50 8 51 0.86 # 13797 # 14096 # 1 # ID=2_16;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_29 - 100 HTH_32 PF13565.1 77 1.6e-05 18.0 0.0 1 1 2.6e-06 2.7e-05 17.2 0.0 48 76 25 50 8 51 0.87 # 27684 # 27983 # 1 # ID=1_29;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.340 1_14 - 198 HTH_32 PF13565.1 77 4.6e-05 16.5 0.2 1 1 1e-05 0.0001 15.3 0.2 19 77 131 181 118 181 0.79 # 13283 # 13876 # -1 # ID=1_14;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.335 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/ef1234f1-ca01-45f3-a490-fe7f9869c637 # Target file: checkm_output/bins/pGCA_001548415.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_001548415.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/ef1234f1-ca01-45f3-a490-fe7f9869c637 checkm_output/bins/pGCA_001548415.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/Staphylococcus/training_20210111 # Date: Mon Jan 11 14:53:38 2021 # [ok]