# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_13 - 571 AAA_19 PF13245.1 76 6.2e-06 18.0 0.0 1 1 6e-07 1.6e-05 16.7 0.0 9 35 356 381 350 408 0.87 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_14 - 288 AAA_19 PF13245.1 76 0.0007 11.4 0.0 1 1 6.6e-05 0.0018 10.1 0.0 10 35 29 53 24 69 0.82 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_13 - 571 DUF258 PF03193.11 161 2.7e-08 25.2 0.1 1 1 2.2e-09 5.8e-08 24.1 0.1 20 67 341 389 327 394 0.81 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_14 - 288 DUF258 PF03193.11 161 2.7e-06 18.7 0.1 1 1 3.5e-07 9.5e-06 16.9 0.1 20 66 13 60 2 68 0.85 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_10 - 105 GerE PF00196.14 58 0.00011 13.6 0.1 1 1 3.8e-06 0.0002 12.7 0.1 13 34 16 37 12 41 0.91 # 4784 # 5098 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.305 1_6 - 111 ArsA_ATPase PF02374.10 305 4.9e-09 27.6 0.0 1 1 9.1e-11 4.9e-09 27.6 0.0 3 72 3 75 1 100 0.82 # 2728 # 3060 # 1 # ID=1_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.282 1_13 - 571 TIGR01978 TIGR01978 243 3.1e-23 74.1 0.7 1 1 2.3e-24 6.3e-23 73.1 0.7 11 230 342 551 331 563 0.79 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_14 - 288 TIGR01978 TIGR01978 243 3.8e-19 60.8 2.4 1 1 7.9e-19 2.1e-17 55.0 1.7 1 225 2 211 2 219 0.74 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 3_4 - 132 Sterol-sensing PF12349.3 153 0.00014 13.3 0.0 1 1 3.7e-06 0.0002 12.9 0.0 42 97 10 67 2 71 0.87 # 1946 # 2341 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.240 1_13 - 571 AAA_18 PF13238.1 129 1.5e-06 20.6 0.3 1 1 9.4e-07 1.7e-05 17.2 0.1 2 23 361 393 361 465 0.65 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_6 - 111 AAA_18 PF13238.1 129 5.3e-05 15.6 0.0 1 1 3.5e-06 6.3e-05 15.3 0.0 8 65 12 66 10 102 0.67 # 2728 # 3060 # 1 # ID=1_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.282 1_14 - 288 AAA_18 PF13238.1 129 0.0007 12.0 8.3 1 1 0.00019 0.0035 9.7 4.2 1 68 32 104 32 252 0.72 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 2_2 - 156 MarR_2 PF12802.2 62 3.5e-12 37.9 0.0 1 1 4.2e-13 1.1e-11 36.3 0.0 2 61 35 92 34 93 0.95 # 2128 # 2595 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.250 2_13 - 185 MarR_2 PF12802.2 62 3.5e-05 15.5 0.0 1 1 3.1e-06 8.3e-05 14.3 0.0 13 43 153 181 144 183 0.90 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 1_6 - 111 YhjQ PF06564.7 244 1.7e-06 19.6 0.0 1 1 7.3e-08 2e-06 19.3 0.0 1 85 1 89 1 106 0.78 # 2728 # 3060 # 1 # ID=1_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.282 1_7 - 113 YhjQ PF06564.7 244 3.9e-05 15.1 0.0 1 1 1.8e-06 5e-05 14.8 0.0 107 152 3 49 1 56 0.87 # 3057 # 3395 # 1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.280 1_14 - 288 Zeta_toxin PF06414.7 201 0.00011 13.3 0.2 1 2 2.4e-05 0.00065 10.8 0.0 19 43 32 57 20 69 0.81 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_14 - 288 Zeta_toxin PF06414.7 201 0.00011 13.3 0.2 2 2 0.052 1.4 -0.0 0.0 113 141 210 236 166 281 0.75 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_13 - 571 Zeta_toxin PF06414.7 201 0.00032 11.8 0.0 1 1 2.4e-05 0.00066 10.8 0.0 14 52 355 394 344 419 0.82 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 2_13 - 185 HTH_17 PF12728.2 51 2e-05 16.9 1.4 1 1 1.1e-06 2.9e-05 16.3 0.1 2 24 160 182 160 183 0.92 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 5_1 - 87 HTH_17 PF12728.2 51 0.0013 11.1 6.6 1 1 3e-05 0.00081 11.7 3.5 12 41 17 54 2 71 0.84 # 2 # 262 # 1 # ID=5_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.345 1_13 - 571 AAA_22 PF13401.1 131 3.9e-07 22.3 0.5 1 1 2.2e-07 5.9e-06 18.5 0.5 3 116 356 519 354 530 0.63 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_14 - 288 AAA_22 PF13401.1 131 3.3e-05 16.1 0.2 1 1 4.2e-06 0.00011 14.4 0.2 4 29 29 54 26 95 0.84 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 2_13 - 185 Sigma70_r4_2 PF08281.7 54 1.8e-06 19.4 0.3 1 1 9.6e-08 5.2e-06 18.0 0.1 20 47 153 180 147 182 0.88 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 2_13 - 185 Mga PF05043.8 87 2.3e-06 19.9 0.1 1 1 1.8e-07 9.5e-06 17.9 0.0 22 54 151 183 145 184 0.95 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 1_13 - 571 NB-ARC PF00931.17 287 1.9e-06 18.9 0.2 1 2 1.4e-05 0.00039 11.3 0.1 7 36 345 374 341 378 0.89 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_13 - 571 NB-ARC PF00931.17 287 1.9e-06 18.9 0.2 2 2 0.0017 0.047 4.5 0.0 212 269 400 462 396 472 0.70 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_14 - 288 NB-ARC PF00931.17 287 6.7e-05 13.8 0.6 1 2 2.5e-06 6.7e-05 13.8 0.6 17 42 27 52 18 62 0.85 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_14 - 288 NB-ARC PF00931.17 287 6.7e-05 13.8 0.6 2 2 0.053 1.4 -0.4 0.2 230 278 71 123 59 130 0.66 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_14 - 288 AAA_23 PF13476.1 202 2.4e-05 16.7 20.8 1 1 0.00012 0.0031 9.8 20.8 11 175 20 271 9 287 0.52 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_13 - 571 AAA_23 PF13476.1 202 0.00049 12.5 18.4 1 1 1.7e-06 4.7e-05 15.8 10.7 11 40 348 378 329 567 0.71 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 2_13 - 185 HTH_22 PF13309.1 64 3e-05 15.8 0.2 1 1 1.6e-06 8.8e-05 14.3 0.2 42 64 159 181 140 181 0.77 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 2_12 - 163 MULE PF10551.4 93 1.8e-05 17.0 0.0 1 1 9.4e-07 5.1e-05 15.5 0.0 19 77 92 147 77 161 0.86 # 10017 # 10505 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 2_14 - 66 HEM4 PF02602.10 231 3.7e-05 15.1 0.0 1 1 2.8e-06 3.8e-05 15.0 0.0 123 154 22 53 5 65 0.81 # 11424 # 11621 # 1 # ID=2_14;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_11 - 66 HEM4 PF02602.10 231 3.7e-05 15.1 0.0 1 1 2.8e-06 3.8e-05 15.0 0.0 123 154 22 53 5 65 0.81 # 5902 # 6099 # 1 # ID=3_11;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 5_1 - 87 HEM4 PF02602.10 231 0.00014 13.1 0.0 1 1 1.3e-05 0.00017 12.9 0.0 131 155 6 30 2 50 0.78 # 2 # 262 # 1 # ID=5_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.345 2_12 - 163 HEM4 PF02602.10 231 0.00018 12.8 0.0 1 1 1.9e-05 0.00025 12.3 0.0 124 155 23 54 9 71 0.79 # 10017 # 10505 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 2_10 - 313 HTH_36 PF13730.1 55 2.2e-07 23.1 0.9 1 1 1.8e-08 5e-07 21.9 0.9 2 54 32 95 31 96 0.86 # 7604 # 8542 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.280 2_13 - 185 HTH_36 PF13730.1 55 1.9e-05 16.8 0.0 1 1 1.6e-06 4.2e-05 15.7 0.0 29 48 163 182 101 183 0.88 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 1_7 - 113 AAA_31 PF13614.1 157 2.9e-08 25.8 0.2 1 2 4.1e-09 1.1e-07 23.9 0.1 107 150 1 46 1 54 0.91 # 3057 # 3395 # 1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.280 1_7 - 113 AAA_31 PF13614.1 157 2.9e-08 25.8 0.2 2 2 0.061 1.6 0.6 0.0 85 133 53 103 45 110 0.56 # 3057 # 3395 # 1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.280 1_6 - 111 AAA_31 PF13614.1 157 4.8e-08 25.1 0.0 1 1 2.1e-09 5.6e-08 24.9 0.0 9 91 10 87 2 104 0.74 # 2728 # 3060 # 1 # ID=1_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.282 1_13 - 571 SRP54 PF00448.17 196 0.0001 13.8 0.0 1 1 6.9e-06 0.00019 13.0 0.0 2 42 358 398 357 425 0.90 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_14 - 288 SRP54 PF00448.17 196 0.00011 13.7 0.2 1 1 2.8e-05 0.00075 11.0 0.2 3 28 31 56 29 66 0.82 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_14 - 288 AAA_33 PF13671.1 143 6.6e-05 14.9 0.0 1 1 2.6e-06 0.00014 13.8 0.0 2 24 32 54 31 159 0.76 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_13 - 571 AAA_30 PF13604.1 196 3.3e-05 15.5 0.0 1 2 1.2e-05 0.00032 12.3 0.0 15 43 354 382 350 393 0.80 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_13 - 571 AAA_30 PF13604.1 196 3.3e-05 15.5 0.0 2 2 0.047 1.3 0.6 0.0 90 109 478 503 456 524 0.69 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_14 - 288 AAA_30 PF13604.1 196 6.8e-05 14.5 0.0 1 1 5e-06 0.00013 13.6 0.0 17 49 28 60 23 66 0.82 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_14 - 288 Miro PF08477.8 119 7.9e-05 15.2 0.8 1 1 6.3e-06 0.00034 13.2 0.2 2 41 32 70 32 145 0.78 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_14 - 288 AAA_17 PF13207.1 121 1.7e-07 24.2 0.7 1 1 1.6e-07 1.7e-06 20.9 0.7 1 35 31 81 31 285 0.79 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_13 - 571 AAA_17 PF13207.1 121 3e-07 23.3 0.0 1 1 6.8e-08 7.4e-07 22.1 0.0 3 32 361 387 359 461 0.62 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 2_12 - 163 AAA_17 PF13207.1 121 2.8e-06 20.2 0.3 1 1 3.2e-07 3.5e-06 19.9 0.3 23 112 24 121 18 147 0.84 # 10017 # 10505 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 1_6 - 111 AAA_17 PF13207.1 121 0.00036 13.4 0.0 1 1 3.7e-05 0.0004 13.3 0.0 9 60 12 67 6 107 0.61 # 2728 # 3060 # 1 # ID=1_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.282 5_1 - 87 AAA_17 PF13207.1 121 0.00037 13.4 0.7 1 1 3.6e-05 0.00039 13.3 0.7 27 100 4 84 1 87 0.73 # 2 # 262 # 1 # ID=5_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.345 2_2 - 156 HTH_1 PF00126.22 60 2.7e-06 19.2 0.0 1 1 9.4e-08 5.1e-06 18.3 0.0 20 60 59 103 59 103 0.87 # 2128 # 2595 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.250 2_2 - 156 HTH_34 PF13601.1 80 4.4e-07 22.0 0.5 1 1 1.5e-08 8e-07 21.1 0.4 2 67 40 104 39 127 0.92 # 2128 # 2595 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.250 2_13 - 185 HTH_29 PF13551.1 112 1.5e-06 20.4 2.9 1 2 0.00034 0.019 7.2 0.4 37 69 124 154 117 162 0.76 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 2_13 - 185 HTH_29 PF13551.1 112 1.5e-06 20.4 2.9 2 2 2.9e-06 0.00016 13.9 0.0 9 36 156 183 151 184 0.84 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 2_2 - 156 MarR PF01047.17 59 1.1e-16 52.4 0.1 1 1 3.6e-18 1.9e-16 51.6 0.1 1 59 36 94 36 94 0.99 # 2128 # 2595 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.250 1_14 - 288 ArgK PF03308.11 267 7.5e-05 13.6 0.0 1 1 3.2e-06 0.00017 12.4 0.0 19 54 19 54 5 61 0.84 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 2_11 - 257 DUF3552 PF12072.3 201 0.046 4.9 33.0 1 2 0.00011 0.0061 7.8 15.2 33 131 40 137 30 145 0.89 # 8986 # 9756 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.268 2_11 - 257 DUF3552 PF12072.3 201 0.046 4.9 33.0 2 2 0.0018 0.098 3.8 8.8 75 135 144 203 141 207 0.90 # 8986 # 9756 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.268 2_2 - 156 HTH_5 PF01022.15 47 0.00031 12.5 0.0 1 1 1e-05 0.00054 11.7 0.0 21 45 58 82 56 84 0.95 # 2128 # 2595 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.250 1_9 - 281 Terminase_5 PF06056.7 58 2.8e-05 15.7 0.2 1 2 4.4e-06 0.00024 12.7 0.1 13 43 16 46 15 60 0.87 # 3957 # 4799 # -1 # ID=1_9;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.310 1_9 - 281 Terminase_5 PF06056.7 58 2.8e-05 15.7 0.2 2 2 0.053 2.8 -0.3 0.0 22 53 199 230 198 233 0.87 # 3957 # 4799 # -1 # ID=1_9;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.310 1_17 - 147 YIF1 PF03878.10 240 0.00018 12.7 3.9 1 1 3.4e-06 0.00018 12.7 3.9 127 197 8 80 1 134 0.73 # 10626 # 11066 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.224 2_2 - 156 HTH_24 PF13412.1 48 2.3e-11 35.0 0.1 1 1 1.9e-12 5.1e-11 33.9 0.1 2 47 37 82 36 83 0.95 # 2128 # 2595 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.250 2_13 - 185 HTH_24 PF13412.1 48 2.8e-06 18.8 0.0 1 1 2e-07 5.5e-06 17.8 0.0 10 40 152 182 151 183 0.93 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 1_14 - 288 AAA_21 PF13304.1 303 1.1e-14 47.0 10.1 1 3 5.9e-09 1.6e-07 23.5 1.7 3 78 33 104 31 114 0.82 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_14 - 288 AAA_21 PF13304.1 303 1.1e-14 47.0 10.1 2 3 7.5e-10 2e-08 26.5 0.0 232 300 126 192 116 195 0.84 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_14 - 288 AAA_21 PF13304.1 303 1.1e-14 47.0 10.1 3 3 0.095 2.6 -0.1 1.6 125 186 221 274 195 287 0.34 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_13 - 571 AAA_21 PF13304.1 303 1.8e-07 23.4 2.4 1 1 6.6e-09 1.8e-07 23.4 2.4 1 294 359 523 359 524 0.63 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 2_13 - 185 HTH_AsnC-type PF13404.1 42 0.00013 13.6 0.0 1 1 9.8e-06 0.00026 12.6 0.0 17 39 159 181 151 182 0.84 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 2_2 - 156 HTH_AsnC-type PF13404.1 42 0.00019 13.0 0.0 1 1 1.2e-05 0.00033 12.3 0.0 8 41 43 76 41 77 0.87 # 2128 # 2595 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.250 2_12 - 163 DDE_Tnp_IS240 PF13610.1 140 1.1e-30 98.5 0.5 1 1 5.5e-32 1.5e-30 98.1 0.5 3 84 72 152 70 162 0.91 # 10017 # 10505 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 5_1 - 87 DDE_Tnp_IS240 PF13610.1 140 1.9e-19 62.1 2.2 1 1 1.1e-20 3.1e-19 61.4 2.2 3 41 48 86 46 87 0.96 # 2 # 262 # 1 # ID=5_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.345 1_14 - 288 TIGR03263 TIGR03263 180 2.4e-05 15.7 1.8 1 2 3e-06 0.00016 13.0 0.1 6 86 34 113 29 119 0.88 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_14 - 288 TIGR03263 TIGR03263 180 2.4e-05 15.7 1.8 2 2 0.0073 0.39 2.0 0.2 53 101 178 226 164 252 0.75 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_24 - 155 ThiI PF02568.9 197 0.00037 12.0 1.1 1 1 1.1e-05 0.00061 11.3 1.1 39 106 8 75 4 81 0.89 # 16249 # 16713 # -1 # ID=1_24;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.226 1_19 - 147 YMF19 PF02326.10 86 0.0058 9.3 12.5 1 2 0.00048 0.026 7.2 5.4 12 48 4 50 3 53 0.85 # 11580 # 12020 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.234 1_19 - 147 YMF19 PF02326.10 86 0.0058 9.3 12.5 2 2 0.0013 0.072 5.8 1.8 18 61 52 97 45 114 0.79 # 11580 # 12020 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.234 1_13 - 571 IstB_IS21 PF01695.12 178 0.00013 13.4 0.3 1 2 0.00013 0.0072 7.8 0.0 38 62 347 372 331 377 0.82 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_13 - 571 IstB_IS21 PF01695.12 178 0.00013 13.4 0.3 2 2 0.0029 0.16 3.4 0.0 106 146 484 523 468 537 0.71 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 2_13 - 185 HTH_IclR PF09339.5 52 7.1e-06 17.7 0.0 1 1 2.9e-07 1.6e-05 16.6 0.0 17 38 158 179 153 182 0.86 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 2_2 - 156 HTH_10 PF04967.7 53 9.5e-05 14.0 0.1 1 1 3.8e-06 0.00021 13.0 0.1 24 50 53 79 48 81 0.88 # 2128 # 2595 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.250 2_13 - 185 HTH_7 PF02796.10 45 1e-07 23.8 0.5 1 1 6.7e-09 3.6e-07 22.1 0.1 1 40 139 178 139 182 0.83 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 1_26 - 61 TIGR00810 TIGR00810 73 0.051 5.5 18.6 1 2 0.002 0.11 4.4 6.7 1 17 5 21 5 30 0.85 # 17619 # 17801 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.213 1_26 - 61 TIGR00810 TIGR00810 73 0.051 5.5 18.6 2 2 0.00022 0.012 7.5 4.8 41 73 24 57 22 57 0.84 # 17619 # 17801 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.213 1_13 - 571 SbcCD_C PF13558.1 90 0.00019 13.4 0.2 1 1 3.7e-05 0.001 11.1 0.2 62 83 485 506 455 513 0.83 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_14 - 288 SbcCD_C PF13558.1 90 0.00053 12.0 0.0 1 1 3.7e-05 0.001 11.1 0.0 55 88 146 173 129 175 0.77 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 2_2 - 156 HTH_DeoR PF08220.7 57 0.00027 12.6 0.1 1 1 9.8e-06 0.00053 11.6 0.1 4 41 42 79 40 85 0.84 # 2128 # 2595 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.250 2_13 - 185 Phage_AlpA PF05930.7 51 0.00011 14.0 0.0 1 1 3.7e-06 0.0002 13.1 0.0 7 26 163 182 157 184 0.88 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 1_13 - 571 AAA_14 PF13173.1 128 1.6e-06 20.1 0.5 1 2 6.4e-07 1.7e-05 16.8 0.1 1 47 356 402 356 431 0.70 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_13 - 571 AAA_14 PF13173.1 128 1.6e-06 20.1 0.5 2 2 0.086 2.3 0.2 0.0 50 73 479 498 456 534 0.69 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_14 - 288 AAA_14 PF13173.1 128 3.3e-06 19.1 0.2 1 1 1.2e-07 3.3e-06 19.1 0.2 2 65 29 99 28 157 0.74 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_14 - 288 AAA PF00004.24 132 1.6e-05 17.1 1.5 1 1 1.4e-06 3.7e-05 16.0 1.0 3 37 34 70 32 229 0.82 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_13 - 571 AAA PF00004.24 132 0.0024 10.1 3.5 1 1 0.00035 0.0094 8.2 0.5 3 53 362 421 360 541 0.74 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_13 - 571 AAA_10 PF12846.2 304 7.4e-05 14.3 0.1 1 1 7.2e-06 0.0002 12.9 0.1 2 26 358 382 357 395 0.80 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_14 - 288 AAA_10 PF12846.2 304 0.0002 12.9 0.3 1 2 3.2e-05 0.00085 10.8 0.2 6 26 34 54 30 64 0.82 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_14 - 288 AAA_10 PF12846.2 304 0.0002 12.9 0.3 2 2 0.071 1.9 -0.2 0.0 219 267 147 195 104 267 0.73 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_13 - 571 AAA_16 PF13191.1 185 1.9e-05 16.7 0.0 1 1 3.1e-06 8.4e-05 14.6 0.0 25 48 358 380 344 426 0.77 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_14 - 288 AAA_16 PF13191.1 185 0.00042 12.4 0.0 1 1 2.5e-05 0.00067 11.7 0.0 23 60 28 66 17 149 0.82 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 2_2 - 156 HxlR PF01638.12 91 2.3e-06 19.3 0.3 1 1 9.7e-08 5.2e-06 18.1 0.2 24 85 58 118 39 124 0.80 # 2128 # 2595 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.250 2_13 - 185 HTH_23 PF13384.1 50 1.4e-08 26.3 0.0 1 1 4.3e-09 3.4e-08 25.1 0.0 6 40 147 182 143 183 0.92 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 1_10 - 105 HTH_23 PF13384.1 50 5e-07 21.4 1.3 1 1 7.5e-08 5.8e-07 21.2 0.3 2 45 6 49 5 53 0.90 # 4784 # 5098 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.305 2_14 - 66 HTH_23 PF13384.1 50 1.7e-06 19.7 1.5 1 2 0.062 0.48 2.3 0.0 17 27 25 35 16 36 0.80 # 11424 # 11621 # 1 # ID=2_14;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_14 - 66 HTH_23 PF13384.1 50 1.7e-06 19.7 1.5 2 2 2.5e-06 1.9e-05 16.3 0.3 28 41 41 54 40 60 0.92 # 11424 # 11621 # 1 # ID=2_14;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_11 - 66 HTH_23 PF13384.1 50 1.7e-06 19.7 1.5 1 2 0.062 0.48 2.3 0.0 17 27 25 35 16 36 0.80 # 5902 # 6099 # 1 # ID=3_11;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_11 - 66 HTH_23 PF13384.1 50 1.7e-06 19.7 1.5 2 2 2.5e-06 1.9e-05 16.3 0.3 28 41 41 54 40 60 0.92 # 5902 # 6099 # 1 # ID=3_11;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_9 - 281 HTH_23 PF13384.1 50 3.9e-06 18.5 0.1 1 1 1.6e-06 1.3e-05 16.9 0.0 11 40 7 39 5 43 0.88 # 3957 # 4799 # -1 # ID=1_9;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.310 2_12 - 163 HTH_23 PF13384.1 50 6.7e-06 17.8 1.4 1 1 9e-06 6.9e-05 14.6 0.1 28 41 41 54 40 58 0.92 # 10017 # 10505 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 5_1 - 87 HTH_23 PF13384.1 50 4.6e-05 15.1 1.1 1 1 5.9e-06 4.6e-05 15.1 1.1 28 41 17 30 16 46 0.93 # 2 # 262 # 1 # ID=5_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.345 2_2 - 156 HTH_45 PF14947.1 77 8.3e-05 14.5 1.1 1 1 3.4e-06 0.00018 13.4 1.1 11 65 43 105 40 125 0.77 # 2128 # 2595 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.250 1_9 - 281 rve_2 PF13333.1 52 1.6e-10 33.0 1.7 1 1 8.8e-12 4.8e-10 31.5 1.7 1 49 223 277 223 278 0.80 # 3957 # 4799 # -1 # ID=1_9;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.310 1_13 - 571 T2SE PF00437.15 272 2.7e-05 15.1 0.0 1 1 1.1e-06 6.1e-05 14.0 0.0 97 151 326 380 293 397 0.80 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 2_13 - 185 UPF0122 PF04297.9 101 0.00012 14.2 0.2 1 1 6.8e-06 0.00037 12.6 0.0 22 56 148 182 142 184 0.82 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 1_14 - 288 ATP-synt_ab PF00006.20 215 0.00016 13.2 0.0 1 1 4.5e-06 0.00024 12.6 0.0 7 49 21 76 18 247 0.73 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 2_2 - 156 HTH_6 PF01418.12 77 6.8e-05 14.7 0.4 1 2 1.6e-05 0.00087 11.1 0.1 18 58 40 76 29 89 0.80 # 2128 # 2595 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.250 2_2 - 156 HTH_6 PF01418.12 77 6.8e-05 14.7 0.4 2 2 0.016 0.85 1.5 0.0 19 34 133 148 117 153 0.79 # 2128 # 2595 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.250 2_11 - 257 TIGR02168 TIGR02168 1181 1.5e-07 21.2 34.0 1 1 6.4e-09 1.7e-07 21.0 34.0 252 441 48 234 10 245 0.86 # 8986 # 9756 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.268 1_13 - 571 TIGR02168 TIGR02168 1181 1.6e-07 21.0 0.2 1 2 1.6e-05 0.00043 9.7 0.2 22 39 356 373 347 376 0.84 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_13 - 571 TIGR02168 TIGR02168 1181 1.6e-07 21.0 0.2 2 2 2.4e-05 0.00065 9.1 0.0 1116 1164 489 537 468 537 0.88 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 2_13 - 185 HTH_11 PF08279.7 55 4.6e-11 34.3 0.1 1 1 2.1e-11 2.8e-10 31.8 0.1 5 39 150 183 146 184 0.90 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 2_2 - 156 HTH_11 PF08279.7 55 2.8e-09 28.6 0.3 1 1 5.2e-10 7.1e-09 27.3 0.1 2 43 40 80 39 96 0.85 # 2128 # 2595 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.250 1_11 - 114 HTH_11 PF08279.7 55 8.7e-06 17.4 0.2 1 1 1.2e-06 1.7e-05 16.5 0.2 12 55 31 74 21 74 0.87 # 5461 # 5802 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.237 2_11 - 257 HTH_11 PF08279.7 55 0.00022 12.9 0.0 1 1 6.5e-05 0.00088 11.0 0.0 21 40 7 26 3 31 0.87 # 8986 # 9756 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.268 1_14 - 288 UPF0079 PF02367.12 123 1.2e-06 20.3 0.2 1 1 5.6e-08 3e-06 18.9 0.2 11 43 25 57 18 132 0.84 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_14 - 288 NACHT PF05729.7 166 4.4e-05 15.2 1.9 1 1 1.1e-06 6.2e-05 14.7 0.3 3 25 32 54 30 59 0.88 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 5_1 - 87 Arg_repressor PF01316.16 70 5.6e-05 14.7 0.0 1 1 6.3e-06 8.6e-05 14.2 0.0 24 48 6 30 3 54 0.78 # 2 # 262 # 1 # ID=5_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.345 2_14 - 66 Arg_repressor PF01316.16 70 7.5e-05 14.3 0.0 1 1 7e-06 9.5e-05 14.0 0.0 24 47 30 53 24 63 0.92 # 11424 # 11621 # 1 # ID=2_14;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_11 - 66 Arg_repressor PF01316.16 70 7.5e-05 14.3 0.0 1 1 7e-06 9.5e-05 14.0 0.0 24 47 30 53 24 63 0.92 # 5902 # 6099 # 1 # ID=3_11;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_12 - 163 Arg_repressor PF01316.16 70 0.00015 13.4 0.0 1 1 2.2e-05 0.0003 12.4 0.0 24 48 30 54 25 74 0.81 # 10017 # 10505 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 1_10 - 105 HTH_28 PF13518.1 52 2e-09 29.4 0.7 1 1 2.6e-10 2e-09 29.4 0.7 2 40 11 49 10 53 0.94 # 4784 # 5098 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.305 2_13 - 185 HTH_28 PF13518.1 52 8e-07 21.1 1.3 1 1 3.2e-07 2.4e-06 19.6 0.2 2 34 148 181 147 183 0.87 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 2_14 - 66 HTH_28 PF13518.1 52 1.2e-05 17.3 0.6 1 1 3e-06 2.3e-05 16.4 0.6 14 36 30 54 15 55 0.79 # 11424 # 11621 # 1 # ID=2_14;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_11 - 66 HTH_28 PF13518.1 52 1.2e-05 17.3 0.6 1 1 3e-06 2.3e-05 16.4 0.6 14 36 30 54 15 55 0.79 # 5902 # 6099 # 1 # ID=3_11;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 5_1 - 87 HTH_28 PF13518.1 52 2.2e-05 16.5 0.2 1 1 7.9e-06 6.1e-05 15.1 0.2 16 36 8 30 3 31 0.81 # 2 # 262 # 1 # ID=5_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.345 2_12 - 163 HTH_28 PF13518.1 52 3.8e-05 15.7 0.4 1 1 1.7e-05 0.00013 14.0 0.4 15 36 31 54 17 55 0.80 # 10017 # 10505 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 1_9 - 281 HTH_28 PF13518.1 52 3.9e-05 15.7 0.2 1 1 3.4e-05 0.00027 13.0 0.0 13 35 17 39 5 44 0.79 # 3957 # 4799 # -1 # ID=1_9;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.310 2_11 - 257 HlyD PF00529.15 305 3.3e-05 15.3 12.6 1 1 9e-07 4.9e-05 14.7 12.6 43 133 106 195 88 213 0.86 # 8986 # 9756 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.268 1_6 - 111 VirC1 PF07015.6 231 0.00011 13.3 0.0 1 1 2.8e-06 0.00015 12.9 0.0 1 23 1 22 1 51 0.76 # 2728 # 3060 # 1 # ID=1_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.282 2_14 - 66 HTH_Tnp_4 PF13613.1 53 6.8e-06 17.7 0.6 1 1 3.5e-06 3.7e-05 15.3 0.6 30 49 41 60 15 63 0.79 # 11424 # 11621 # 1 # ID=2_14;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_11 - 66 HTH_Tnp_4 PF13613.1 53 6.8e-06 17.7 0.6 1 1 3.5e-06 3.7e-05 15.3 0.6 30 49 41 60 15 63 0.79 # 5902 # 6099 # 1 # ID=3_11;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_12 - 163 HTH_Tnp_4 PF13613.1 53 6e-05 14.6 0.4 1 1 2.1e-05 0.00023 12.8 0.4 30 49 41 60 18 63 0.83 # 10017 # 10505 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 5_1 - 87 HTH_Tnp_4 PF13613.1 53 6.4e-05 14.5 0.1 1 1 1.1e-05 0.00012 13.7 0.1 30 49 17 36 17 39 0.94 # 2 # 262 # 1 # ID=5_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.345 2_13 - 185 HTH_Tnp_4 PF13613.1 53 0.00043 11.9 0.0 1 1 0.00015 0.0016 10.0 0.0 20 43 160 183 157 183 0.88 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 1_6 - 111 Fer4_NifH PF00142.13 273 8.2e-05 13.9 0.1 1 1 1.8e-06 9.7e-05 13.6 0.1 8 49 10 52 3 81 0.83 # 2728 # 3060 # 1 # ID=1_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.282 1_14 - 288 cobW PF02492.14 178 0.00018 13.0 0.1 1 1 9.3e-06 0.0005 11.6 0.1 3 22 32 51 30 77 0.84 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 2_2 - 156 PhoD PF09423.5 453 0.00014 12.5 0.0 1 2 8.8e-05 0.0047 7.5 0.0 176 214 24 60 5 79 0.73 # 2128 # 2595 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.250 2_2 - 156 PhoD PF09423.5 453 0.00014 12.5 0.0 2 2 0.0016 0.087 3.3 0.0 352 405 91 143 87 152 0.82 # 2128 # 2595 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.250 1_13 - 571 ABC_ATPase PF09818.4 448 8.5e-05 13.2 0.0 1 2 4.2e-05 0.0023 8.5 0.0 227 266 336 379 320 382 0.74 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_13 - 571 ABC_ATPase PF09818.4 448 8.5e-05 13.2 0.0 2 2 0.0033 0.18 2.3 0.0 304 351 449 497 440 530 0.91 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_13 - 571 NTPase_1 PF03266.10 168 0.00042 12.1 1.3 1 3 0.0013 0.072 4.8 0.2 3 17 361 375 359 389 0.86 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_13 - 571 NTPase_1 PF03266.10 168 0.00042 12.1 1.3 2 3 0.019 1 1.1 0.0 110 147 399 432 397 445 0.78 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_13 - 571 NTPase_1 PF03266.10 168 0.00042 12.1 1.3 3 3 0.006 0.32 2.7 0.1 68 136 459 528 441 544 0.77 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_26 - 61 DUF1129 PF06570.6 206 0.0018 9.6 7.6 1 1 3.8e-05 0.0021 9.4 7.6 146 200 7 60 2 60 0.78 # 17619 # 17801 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.213 1_11 - 114 GntR PF00392.16 64 5.9e-11 33.8 0.0 1 1 4.5e-12 8.1e-11 33.3 0.0 1 60 12 71 12 75 0.95 # 5461 # 5802 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.237 2_2 - 156 GntR PF00392.16 64 1.5e-05 16.5 0.0 1 1 1.6e-06 3e-05 15.5 0.0 21 55 50 83 42 89 0.86 # 2128 # 2595 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.250 2_13 - 185 GntR PF00392.16 64 0.0001 13.8 0.0 1 1 1.8e-05 0.00032 12.2 0.0 21 47 157 182 154 183 0.92 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 2_10 - 313 YTH PF04146.10 140 0.00016 13.3 1.6 1 1 4.5e-06 0.00024 12.7 0.4 35 120 54 140 45 148 0.66 # 7604 # 8542 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.280 1_14 - 288 AAA_15 PF13175.1 415 3.1e-11 34.9 10.9 1 2 1.3e-07 7e-06 17.3 10.3 12 96 19 115 4 144 0.84 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_14 - 288 AAA_15 PF13175.1 415 3.1e-11 34.9 10.9 2 2 1.7e-09 9.2e-08 23.5 0.0 372 410 151 189 131 194 0.92 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 2_2 - 156 Fe_dep_repress PF01325.14 60 3.4e-10 31.8 0.3 1 1 1.4e-11 7.5e-10 30.7 0.1 15 53 45 83 42 88 0.92 # 2128 # 2595 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.250 1_9 - 281 rve_3 PF13683.1 67 3.1e-12 38.0 0.1 1 1 1.8e-13 9.7e-12 36.4 0.1 2 67 205 272 204 272 0.94 # 3957 # 4799 # -1 # ID=1_9;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.310 2_13 - 185 TetR_N PF00440.18 47 2.3e-06 19.3 0.1 1 2 0.015 0.81 1.5 0.0 11 21 3 13 1 13 0.84 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 2_13 - 185 TetR_N PF00440.18 47 2.3e-06 19.3 0.1 2 2 7.9e-07 4.3e-05 15.2 0.0 16 35 159 178 156 179 0.90 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 1_9 - 281 rve PF00665.21 120 5.4e-23 73.5 0.0 1 1 6.7e-24 1.2e-22 72.3 0.0 2 119 121 232 120 233 0.92 # 3957 # 4799 # -1 # ID=1_9;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.310 2_12 - 163 rve PF00665.21 120 2.7e-13 42.2 0.2 1 2 0.073 1.3 1.2 0.0 83 102 30 49 8 52 0.89 # 10017 # 10505 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 2_12 - 163 rve PF00665.21 120 2.7e-13 42.2 0.2 2 2 1.3e-13 2.3e-12 39.1 0.1 2 96 66 154 65 161 0.83 # 10017 # 10505 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 5_1 - 87 rve PF00665.21 120 1.1e-07 24.0 0.2 1 2 0.032 0.58 2.4 0.0 83 102 6 25 1 29 0.87 # 2 # 262 # 1 # ID=5_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.345 5_1 - 87 rve PF00665.21 120 1.1e-07 24.0 0.2 2 2 9.6e-08 1.7e-06 20.2 0.1 2 45 42 83 41 87 0.81 # 2 # 262 # 1 # ID=5_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.345 1_2 - 297 HTH_25 PF13413.1 62 0.00011 13.8 0.0 1 1 4.6e-06 0.00025 12.8 0.0 8 35 219 246 218 262 0.91 # 443 # 1333 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.241 2_14 - 66 HTH_Tnp_1 PF01527.15 76 0.00021 13.3 0.3 1 1 1.6e-05 0.00028 12.9 0.3 7 47 9 54 5 65 0.68 # 11424 # 11621 # 1 # ID=2_14;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_11 - 66 HTH_Tnp_1 PF01527.15 76 0.00021 13.3 0.3 1 1 1.6e-05 0.00028 12.9 0.3 7 47 9 54 5 65 0.68 # 5902 # 6099 # 1 # ID=3_11;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_12 - 163 HTH_Tnp_1 PF01527.15 76 0.0018 10.3 2.4 1 1 0.00044 0.008 8.3 1.6 24 47 29 54 5 76 0.78 # 10017 # 10505 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 1_14 - 288 MobB PF03205.9 140 2e-05 16.3 0.2 1 1 2.3e-06 6.2e-05 14.8 0.2 2 25 31 54 30 63 0.90 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_13 - 571 MobB PF03205.9 140 0.00012 13.9 0.2 1 1 1.7e-05 0.00045 12.0 0.2 2 20 359 377 358 402 0.84 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 2_13 - 185 HTH_38 PF13936.1 44 1.3e-07 23.1 0.0 1 1 6.8e-09 3.7e-07 21.7 0.0 11 42 149 181 142 182 0.89 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 2_13 - 185 Sigma70_r4 PF04545.11 50 1.4e-05 16.4 0.3 1 1 7.2e-07 3.9e-05 15.0 0.0 13 39 151 178 142 183 0.76 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 2_2 - 156 HTH_27 PF13463.1 68 2.1e-10 32.9 0.0 1 1 1e-11 5.5e-10 31.6 0.0 24 68 58 102 36 102 0.88 # 2128 # 2595 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.250 1_9 - 281 DDE_Tnp_1 PF01609.16 213 5.4e-05 14.8 1.4 1 2 0.025 1.4 0.4 0.3 27 41 55 70 33 113 0.80 # 3957 # 4799 # -1 # ID=1_9;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.310 1_9 - 281 DDE_Tnp_1 PF01609.16 213 5.4e-05 14.8 1.4 2 2 3.4e-06 0.00018 13.1 0.0 45 111 152 218 139 267 0.84 # 3957 # 4799 # -1 # ID=1_9;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.310 2_13 - 185 HTH_3 PF01381.17 55 5.7e-06 18.2 0.1 1 1 2.2e-07 1.2e-05 17.2 0.1 4 28 154 178 151 183 0.87 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 2_12 - 163 DDE_3 PF13358.1 146 5.5e-06 18.2 0.1 1 1 2e-07 1.1e-05 17.2 0.1 26 94 74 140 50 148 0.82 # 10017 # 10505 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 1_9 - 281 HTH_21 PF13276.1 60 1.3e-19 62.1 1.3 1 1 1.9e-20 3.4e-19 60.7 1.3 4 60 44 100 41 100 0.93 # 3957 # 4799 # -1 # ID=1_9;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.310 2_14 - 66 HTH_21 PF13276.1 60 8.5e-05 14.6 0.4 1 1 5.4e-06 9.8e-05 14.4 0.4 19 47 24 51 9 65 0.86 # 11424 # 11621 # 1 # ID=2_14;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_11 - 66 HTH_21 PF13276.1 60 8.5e-05 14.6 0.4 1 1 5.4e-06 9.8e-05 14.4 0.4 19 47 24 51 9 65 0.86 # 5902 # 6099 # 1 # ID=3_11;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_12 - 163 DDE_Tnp_IS66 PF03050.9 271 9.9e-08 23.5 0.5 1 1 8.6e-09 1.2e-07 23.2 0.5 16 98 21 98 7 134 0.76 # 10017 # 10505 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 5_1 - 87 DDE_Tnp_IS66 PF03050.9 271 1.6e-07 22.8 0.5 1 1 1.3e-08 1.7e-07 22.7 0.5 21 97 2 72 1 84 0.81 # 2 # 262 # 1 # ID=5_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.345 2_14 - 66 DDE_Tnp_IS66 PF03050.9 271 2e-05 15.9 0.0 1 1 1.5e-06 2e-05 15.9 0.0 17 54 22 59 7 65 0.82 # 11424 # 11621 # 1 # ID=2_14;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_11 - 66 DDE_Tnp_IS66 PF03050.9 271 2e-05 15.9 0.0 1 1 1.5e-06 2e-05 15.9 0.0 17 54 22 59 7 65 0.82 # 5902 # 6099 # 1 # ID=3_11;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_2 - 156 TrmB PF01978.14 68 1.8e-06 19.7 0.1 1 1 1.7e-07 4.5e-06 18.4 0.1 19 56 49 86 33 103 0.81 # 2128 # 2595 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.250 2_13 - 185 TrmB PF01978.14 68 2.6e-06 19.2 0.0 1 1 1.9e-07 5.1e-06 18.2 0.0 20 44 157 181 151 183 0.88 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 1_6 - 111 CbiA PF01656.18 195 1.8e-14 45.6 0.1 1 1 7.6e-16 2e-14 45.4 0.1 1 88 4 97 4 108 0.68 # 2728 # 3060 # 1 # ID=1_6;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.282 1_7 - 113 CbiA PF01656.18 195 7e-13 40.4 0.0 1 1 2.9e-14 7.7e-13 40.3 0.0 83 176 1 98 1 110 0.87 # 3057 # 3395 # 1 # ID=1_7;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.280 1_13 - 571 ABC_tran PF00005.22 137 4.4e-36 116.2 0.0 1 1 3.6e-37 9.7e-36 115.1 0.0 1 137 347 497 347 497 0.94 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_14 - 288 ABC_tran PF00005.22 137 2.4e-32 104.1 2.0 1 2 1.4e-33 3.8e-32 103.5 0.0 1 136 19 158 19 159 0.94 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_14 - 288 ABC_tran PF00005.22 137 2.4e-32 104.1 2.0 2 2 0.094 2.5 0.4 0.4 25 74 167 233 158 281 0.46 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 2_2 - 156 Rrf2 PF02082.15 83 0.00027 13.1 0.3 1 1 1.1e-05 0.00059 12.0 0.1 16 55 43 82 30 85 0.80 # 2128 # 2595 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.250 1_13 - 571 SMC_N PF02463.14 220 2.4e-12 38.5 3.3 1 2 1.7e-05 0.00045 11.5 0.3 23 42 356 375 338 384 0.79 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_13 - 571 SMC_N PF02463.14 220 2.4e-12 38.5 3.3 2 2 2.1e-10 5.7e-09 27.5 0.2 110 209 387 537 376 544 0.84 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_14 - 288 SMC_N PF02463.14 220 7.6e-08 23.8 6.5 1 3 3.5e-09 9.3e-08 23.5 1.7 16 205 20 197 8 211 0.72 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_14 - 288 SMC_N PF02463.14 220 7.6e-08 23.8 6.5 2 3 0.087 2.3 -0.7 0.1 84 207 214 235 204 249 0.57 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_14 - 288 SMC_N PF02463.14 220 7.6e-08 23.8 6.5 3 3 0.077 2.1 -0.5 0.0 50 72 245 267 236 280 0.76 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_13 - 571 AAA_29 PF13555.1 62 6.5e-07 20.9 0.2 1 1 5.4e-08 1.5e-06 19.8 0.2 16 52 351 387 344 393 0.76 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 1_14 - 288 AAA_29 PF13555.1 62 6.2e-06 17.8 0.1 1 1 4.3e-07 1.2e-05 16.9 0.1 14 50 21 56 15 62 0.75 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 1_13 - 571 AAA_28 PF13521.1 163 0.00059 11.9 0.2 1 1 3e-05 0.0016 10.4 0.2 3 21 361 379 359 392 0.87 # 6208 # 7920 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266 2_10 - 313 RepA_N PF06970.6 76 1.3e-34 110.0 6.6 1 2 2.3e-36 1.3e-34 110.0 6.6 1 76 15 90 15 90 0.99 # 7604 # 8542 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.280 2_10 - 313 RepA_N PF06970.6 76 1.3e-34 110.0 6.6 2 2 0.03 1.6 0.7 1.5 37 66 166 195 155 200 0.80 # 7604 # 8542 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.280 2_13 - 185 HTH_32 PF13565.1 77 2.3e-08 26.8 1.2 1 1 8.9e-09 9.7e-08 24.8 0.4 12 76 126 179 118 180 0.75 # 10647 # 11201 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.342 2_14 - 66 HTH_32 PF13565.1 77 1.3e-06 21.2 0.0 1 1 1.4e-07 1.5e-06 21.1 0.0 48 76 25 50 7 51 0.86 # 11424 # 11621 # 1 # ID=2_14;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_11 - 66 HTH_32 PF13565.1 77 1.3e-06 21.2 0.0 1 1 1.4e-07 1.5e-06 21.1 0.0 48 76 25 50 7 51 0.86 # 5902 # 6099 # 1 # ID=3_11;partial=01;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 5_1 - 87 HTH_32 PF13565.1 77 3.1e-06 20.0 0.2 1 1 6.2e-07 6.7e-06 18.9 0.2 49 76 2 26 1 27 0.87 # 2 # 262 # 1 # ID=5_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.345 2_12 - 163 HTH_32 PF13565.1 77 3.8e-06 19.7 0.1 1 1 9.2e-07 9.9e-06 18.4 0.1 48 76 25 50 10 51 0.86 # 10017 # 10505 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 1_14 - 288 RNA_helicase PF00910.17 107 0.00022 13.5 2.7 1 1 5e-06 0.00027 13.2 0.9 3 48 34 93 32 136 0.63 # 8018 # 8881 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/dfd8a278-a4e8-48d6-b9f5-32bbdeb10878 # Target file: checkm_output/bins/pGCA_000759555.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000759555.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/dfd8a278-a4e8-48d6-b9f5-32bbdeb10878 checkm_output/bins/pGCA_000759555.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/Staphylococcus/training_20210111 # Date: Mon Jan 11 14:52:43 2021 # [ok]