# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_1 - 183 RepL PF05732.6 165 0.00025 12.7 3.8 1 2 0.0048 0.34 2.5 0.2 54 80 98 125 51 133 0.69 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 2_1 - 183 RepL PF05732.6 165 0.00025 12.7 3.8 2 2 1e-05 0.00073 11.2 0.4 65 97 152 182 146 182 0.87 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 1_9 - 327 AlaDh_PNT_C PF01262.16 168 0.00015 13.7 0.1 1 1 3.2e-06 0.00023 13.2 0.1 53 145 32 117 5 140 0.79 # 9728 # 10708 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.332 1_20 - 576 AAA_19 PF13245.1 76 4.4e-06 18.9 0.0 1 1 1.3e-07 9.1e-06 17.9 0.0 8 37 361 389 356 402 0.86 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 1_20 - 576 DUF258 PF03193.11 161 1.4e-07 23.3 0.4 1 1 5.7e-09 4.1e-07 21.7 0.0 16 64 343 392 331 412 0.84 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 2_10 - 204 GerE PF00196.14 58 0.00022 13.0 0.1 1 1 6.7e-06 0.00047 11.9 0.1 11 35 168 192 166 196 0.94 # 7555 # 8166 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 1_14 - 554 Peptidase_M56 PF05569.6 299 6.6e-88 286.9 11.6 1 1 1.7e-89 1.2e-87 286.0 11.6 32 299 2 266 1 266 0.99 # 14375 # 16036 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 5_5 - 74 Zn_Tnp_IS1595 PF12760.2 46 0.00029 13.1 2.5 1 2 0.00074 0.053 5.9 0.3 20 27 24 31 19 40 0.79 # 2689 # 2910 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.261 5_5 - 74 Zn_Tnp_IS1595 PF12760.2 46 0.00029 13.1 2.5 2 2 0.00021 0.015 7.6 0.1 18 33 44 64 38 71 0.65 # 2689 # 2910 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.261 1_20 - 576 TIGR01978 TIGR01978 243 3e-26 84.4 7.2 1 1 9.5e-28 6.7e-26 83.2 7.2 3 229 340 557 338 570 0.81 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 2_6 - 138 LAGLIDADG_3 PF14528.1 77 0.00059 12.5 0.6 1 1 4.4e-05 0.0032 10.2 0.6 22 71 52 112 5 117 0.81 # 3879 # 4292 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.297 1_20 - 576 AAA_18 PF13238.1 129 0.00015 14.6 0.1 1 2 2.1e-06 0.00015 14.6 0.1 2 28 367 403 366 440 0.75 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 1_20 - 576 AAA_18 PF13238.1 129 0.00015 14.6 0.1 2 2 0.09 6.4 -0.5 0.3 27 69 499 529 450 571 0.52 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 3_6 - 150 GlnD_UR_UTase PF08335.6 142 6.6e-05 15.2 0.1 1 1 1.3e-06 8.9e-05 14.8 0.1 59 140 59 140 22 141 0.89 # 5514 # 5963 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.351 1_12 - 198 MarR_2 PF12802.2 62 2.9e-06 19.3 0.0 1 2 0.024 0.42 2.8 0.1 23 45 112 134 101 137 0.86 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_12 - 198 MarR_2 PF12802.2 62 2.9e-06 19.3 0.0 2 2 7.5e-06 0.00013 14.0 0.0 7 48 149 187 144 188 0.91 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_9 - 194 MarR_2 PF12802.2 62 3.3e-05 16.0 0.0 1 2 0.019 0.34 3.1 0.1 23 45 112 134 78 137 0.90 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 2_9 - 194 MarR_2 PF12802.2 62 3.3e-05 16.0 0.0 2 2 9.2e-05 0.0016 10.6 0.0 7 45 149 184 144 187 0.89 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 3_9 - 102 MarR_2 PF12802.2 62 0.0001 14.4 0.0 1 1 1e-05 0.00018 13.6 0.0 22 40 2 20 1 21 0.94 # 7691 # 7996 # 1 # ID=3_9;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.386 2_1 - 183 MarR_2 PF12802.2 62 0.0002 13.5 0.0 1 1 2.2e-05 0.00039 12.6 0.0 13 43 154 182 141 182 0.92 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 1_1 - 280 HTH_Crp_2 PF13545.1 76 5.1e-05 15.5 0.0 1 1 1.4e-06 9.9e-05 14.6 0.0 20 68 58 112 41 116 0.73 # 1 # 840 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.229 3_9 - 102 HTH_17 PF12728.2 51 1e-05 18.2 0.0 1 1 5.6e-07 2e-05 17.3 0.0 1 20 1 20 1 21 0.93 # 7691 # 7996 # 1 # ID=3_9;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.386 2_1 - 183 HTH_17 PF12728.2 51 1.7e-05 17.5 0.3 1 1 1e-06 3.7e-05 16.4 0.3 2 20 161 179 161 182 0.94 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 1_10 - 272 AAA_22 PF13401.1 131 7.9e-28 89.6 0.0 1 1 5.8e-29 1.4e-27 88.9 0.0 2 131 25 171 24 171 0.87 # 10926 # 11741 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.303 2_5 - 612 AAA_22 PF13401.1 131 9.5e-10 31.2 1.8 1 1 1.3e-10 3e-09 29.5 0.2 7 125 20 185 14 190 0.68 # 1660 # 3495 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.245 1_20 - 576 AAA_22 PF13401.1 131 1.2e-06 21.1 0.2 1 2 2.4e-06 5.7e-05 15.7 0.0 4 30 363 389 359 421 0.84 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 1_20 - 576 AAA_22 PF13401.1 131 1.2e-06 21.1 0.2 2 2 0.025 0.59 2.7 0.1 79 113 486 523 437 539 0.74 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 4_1 - 204 HTH_19 PF12844.2 64 2.2e-11 36.2 0.1 1 1 5.6e-13 3.9e-11 35.3 0.1 3 60 7 63 6 66 0.95 # 666 # 1277 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.283 1_9 - 327 Chal_sti_synt_C PF02797.10 151 2.7e-07 23.0 0.0 1 1 7.4e-09 5.3e-07 22.1 0.0 13 148 198 323 194 325 0.83 # 9728 # 10708 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.332 4_1 - 204 DcuC PF03606.10 465 8e-05 13.4 1.4 1 1 1.5e-06 0.00011 13.0 1.4 228 303 67 148 50 162 0.70 # 666 # 1277 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.283 1_20 - 576 FtsK_SpoIIIE PF01580.13 205 0.00017 13.5 0.0 1 1 4.8e-06 0.00034 12.5 0.0 23 58 347 383 337 384 0.89 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 2_1 - 183 Sigma70_r4_2 PF08281.7 54 7.2e-06 17.9 0.1 1 1 4.1e-07 1.4e-05 16.9 0.1 21 47 155 181 147 182 0.91 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 2_9 - 194 Sigma70_r4_2 PF08281.7 54 0.00065 11.6 0.0 1 1 3.3e-05 0.0012 10.8 0.0 10 48 144 182 143 183 0.86 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 2_9 - 194 Mga PF05043.8 87 3.4e-07 23.0 0.6 1 2 0.021 0.5 3.2 0.1 24 52 104 132 74 137 0.83 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 2_9 - 194 Mga PF05043.8 87 3.4e-07 23.0 0.6 2 2 5.5e-07 1.3e-05 17.9 0.1 16 56 147 186 143 187 0.94 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 1_12 - 198 Mga PF05043.8 87 1.8e-06 20.7 0.4 1 2 0.022 0.52 3.1 0.1 24 52 104 132 74 137 0.83 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_12 - 198 Mga PF05043.8 87 1.8e-06 20.7 0.4 2 2 3.3e-06 7.8e-05 15.4 0.0 16 55 147 185 143 187 0.93 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_1 - 183 Mga PF05043.8 87 0.0004 13.1 1.6 1 1 2.7e-05 0.00064 12.5 0.1 22 52 152 182 143 182 0.90 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 1_12 - 198 HTH_30 PF13556.1 59 0.00023 13.2 0.0 1 1 6.7e-06 0.00048 12.2 0.0 3 38 151 186 150 187 0.94 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_9 - 102 MerR PF00376.18 38 0.00032 12.7 0.1 1 1 7.3e-06 0.00052 12.1 0.1 1 16 3 18 3 20 0.95 # 7691 # 7996 # 1 # ID=3_9;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.386 4_1 - 204 HTH_31 PF13560.1 64 8.1e-09 28.1 0.0 1 1 1.7e-10 1.2e-08 27.5 0.0 7 61 9 61 7 63 0.94 # 666 # 1277 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.283 1_12 - 198 HTH_22 PF13309.1 64 4.4e-08 25.3 0.3 1 2 0.078 0.93 1.8 0.0 23 38 70 85 64 86 0.87 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_12 - 198 HTH_22 PF13309.1 64 4.4e-08 25.3 0.3 2 2 2.1e-07 2.5e-06 19.7 0.1 13 64 137 182 128 182 0.79 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_9 - 194 HTH_22 PF13309.1 64 8.1e-08 24.4 0.4 1 1 1.4e-07 1.7e-06 20.2 0.1 12 64 136 182 128 182 0.82 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 2_10 - 204 HTH_22 PF13309.1 64 8.1e-07 21.2 1.8 1 2 0.0054 0.064 5.5 0.2 3 41 109 147 107 149 0.93 # 7555 # 8166 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 2_10 - 204 HTH_22 PF13309.1 64 8.1e-07 21.2 1.8 2 2 1.7e-05 0.0002 13.6 0.0 43 61 176 194 171 195 0.94 # 7555 # 8166 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 2_1 - 183 HTH_22 PF13309.1 64 6.2e-05 15.2 0.7 1 1 1.6e-05 0.00019 13.6 0.7 42 64 160 182 145 182 0.89 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 3_9 - 102 HTH_22 PF13309.1 64 7.4e-05 15.0 0.1 1 2 0.00031 0.0036 9.5 0.0 45 59 4 18 3 20 0.91 # 7691 # 7996 # 1 # ID=3_9;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.386 3_9 - 102 HTH_22 PF13309.1 64 7.4e-05 15.0 0.1 2 2 0.029 0.35 3.2 0.1 8 40 47 80 35 83 0.66 # 7691 # 7996 # 1 # ID=3_9;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.386 2_8 - 196 HTH_22 PF13309.1 64 0.00022 13.4 1.2 1 1 6e-05 0.00071 11.8 0.0 46 64 176 194 171 194 0.84 # 5825 # 6412 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.257 4_1 - 204 HTH_37 PF13744.1 80 4.3e-06 19.0 1.8 1 1 6.5e-08 4.6e-06 18.8 0.3 22 76 7 59 3 59 0.95 # 666 # 1277 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.283 3_9 - 102 NUMOD1 PF07453.8 37 0.0004 12.7 0.0 1 1 1.1e-05 0.00075 11.8 0.0 19 35 4 20 3 21 0.93 # 7691 # 7996 # 1 # ID=3_9;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.386 2_15 - 312 HTH_36 PF13730.1 55 9.5e-08 24.6 1.2 1 1 1.3e-08 2.4e-07 23.3 1.2 2 55 32 96 31 96 0.87 # 12273 # 13208 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.257 1_1 - 280 HTH_36 PF13730.1 55 1.1e-06 21.1 0.3 1 1 1.6e-07 2.8e-06 19.9 0.3 2 54 32 95 31 96 0.86 # 1 # 840 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.229 1_12 - 198 HTH_36 PF13730.1 55 5.8e-06 18.9 0.1 1 1 6.8e-07 1.2e-05 17.8 0.1 28 52 163 187 145 188 0.93 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_9 - 194 HTH_36 PF13730.1 55 0.00019 14.0 0.1 1 1 2.2e-05 0.00039 13.0 0.1 28 49 163 184 145 186 0.93 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 2_3 - 38 Ectoine_synth PF06339.7 127 0.00017 14.0 0.0 1 1 2.4e-06 0.00017 14.0 0.0 17 48 4 35 1 37 0.86 # 1343 # 1456 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.316 1_13 - 127 Penicillinase_R PF03965.11 115 7.9e-37 118.3 1.0 1 1 1.3e-38 8.9e-37 118.2 1.0 1 114 8 121 8 122 0.99 # 14005 # 14385 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.255 5_5 - 74 PhnA_Zn_Ribbon PF08274.7 30 0.00011 14.5 2.8 1 1 8.8e-06 0.00063 12.0 2.8 5 27 25 56 18 66 0.95 # 2689 # 2910 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.261 1_19 - 108 PadR PF03551.9 75 2.8e-21 67.6 1.1 1 1 5.6e-23 4e-21 67.1 1.1 1 73 14 82 14 84 0.96 # 19637 # 19960 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.306 1_20 - 576 AAA_30 PF13604.1 196 0.0001 14.3 0.0 1 2 5.7e-06 0.0004 12.4 0.0 16 67 362 414 356 442 0.72 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 1_20 - 576 AAA_30 PF13604.1 196 0.0001 14.3 0.0 2 2 0.073 5.2 -1.0 0.0 90 116 482 517 450 528 0.67 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 2_6 - 138 Usp PF00582.21 140 3.6e-25 81.2 0.0 1 1 6e-27 4.2e-25 81.0 0.0 1 140 1 137 1 137 0.93 # 3879 # 4292 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.297 1_20 - 576 AAA_17 PF13207.1 121 6.6e-07 22.6 0.1 1 1 3.2e-08 2.3e-06 20.9 0.1 4 43 368 403 366 469 0.72 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 2_1 - 183 DUF1804 PF08822.6 165 0.00027 13.1 0.6 1 1 7.5e-06 0.00054 12.2 0.2 4 37 145 178 143 180 0.93 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 1_19 - 108 HTH_34 PF13601.1 80 5.1e-05 15.7 0.0 1 1 8.9e-07 6.3e-05 15.4 0.0 19 70 31 83 9 93 0.76 # 19637 # 19960 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.306 1_11 - 481 HTH_29 PF13551.1 112 7.9e-08 24.9 0.0 1 1 1.8e-08 2.6e-07 23.2 0.0 15 96 36 115 30 129 0.83 # 11734 # 13176 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 2_1 - 183 HTH_29 PF13551.1 112 1.5e-06 20.8 0.2 1 1 4.2e-06 5.9e-05 15.7 0.1 3 34 151 182 149 182 0.84 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 2_10 - 204 HTH_29 PF13551.1 112 3e-06 19.8 0.2 1 1 1.5e-06 2.1e-05 17.1 0.0 4 34 168 197 166 201 0.91 # 7555 # 8166 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 1_12 - 198 HTH_29 PF13551.1 112 3.5e-06 19.6 0.6 1 2 0.064 0.91 2.2 0.2 32 67 121 154 118 158 0.72 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_12 - 198 HTH_29 PF13551.1 112 3.5e-06 19.6 0.6 2 2 9.1e-06 0.00013 14.6 0.0 7 39 156 187 155 192 0.89 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_9 - 194 HTH_29 PF13551.1 112 4.8e-06 19.2 0.4 1 2 0.052 0.74 2.5 0.2 32 68 121 155 118 158 0.73 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 2_9 - 194 HTH_29 PF13551.1 112 4.8e-06 19.2 0.4 2 2 8.1e-06 0.00011 14.7 0.0 7 39 156 187 153 191 0.91 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 1_13 - 127 MarR PF01047.17 59 7.8e-08 24.4 0.1 1 1 9.6e-09 1.4e-07 23.7 0.1 1 54 8 65 8 65 0.96 # 14005 # 14385 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.255 1_12 - 198 MarR PF01047.17 59 1.1e-05 17.6 0.1 1 1 1.9e-06 2.7e-05 16.3 0.0 2 45 146 188 145 188 0.89 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_1 - 183 MarR PF01047.17 59 2.1e-05 16.6 0.1 1 1 6.6e-06 9.3e-05 14.6 0.0 11 39 154 182 151 182 0.93 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 3_9 - 102 MarR PF01047.17 59 5.3e-05 15.4 0.0 1 1 9.7e-06 0.00014 14.0 0.0 18 36 2 20 1 21 0.95 # 7691 # 7996 # 1 # ID=3_9;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.386 2_9 - 194 MarR PF01047.17 59 0.00044 12.4 0.1 1 1 8.3e-05 0.0012 11.1 0.0 1 41 145 184 145 188 0.89 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 1_12 - 198 HTH_20 PF12840.2 61 0.00021 13.5 0.0 1 1 3.1e-05 0.0011 11.2 0.0 15 50 152 186 145 189 0.90 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_1 - 183 HTH_20 PF12840.2 61 0.00028 13.1 0.0 1 1 1.6e-05 0.00057 12.2 0.0 19 46 155 182 152 182 0.93 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 2_9 - 194 RuvB_C PF05491.8 76 0.00046 12.3 0.4 1 2 0.038 2.7 0.2 0.1 55 67 121 133 117 139 0.82 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 2_9 - 194 RuvB_C PF05491.8 76 0.00046 12.3 0.4 2 2 8.7e-05 0.0062 8.7 0.0 6 43 145 178 142 182 0.86 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 2_19 - 281 AAA_4 PF04326.9 122 1.7e-10 33.6 1.9 1 2 2.4e-12 1.7e-10 33.6 1.9 36 120 13 107 1 110 0.82 # 16329 # 17171 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.267 2_19 - 281 AAA_4 PF04326.9 122 1.7e-10 33.6 1.9 2 2 0.081 5.7 -0.4 0.7 118 118 152 152 108 233 0.53 # 16329 # 17171 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.267 1_9 - 327 ACP_syn_III PF08545.5 80 4.3e-33 105.3 0.3 1 1 1.1e-34 7.9e-33 104.5 0.3 2 80 109 186 108 186 0.95 # 9728 # 10708 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.332 2_1 - 183 HTH_5 PF01022.15 47 0.00014 14.0 0.0 1 1 2.4e-05 0.00035 12.7 0.0 9 36 154 181 146 182 0.82 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 2_9 - 194 HTH_5 PF01022.15 47 0.00026 13.1 0.0 1 1 3.6e-05 0.00051 12.2 0.0 5 42 150 187 147 188 0.86 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 3_9 - 102 HTH_5 PF01022.15 47 0.0003 12.9 0.1 1 1 4.9e-05 0.00069 11.7 0.0 16 33 2 19 1 20 0.91 # 7691 # 7996 # 1 # ID=3_9;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.386 2_8 - 196 HTH_5 PF01022.15 47 0.00043 12.4 0.2 1 1 0.00011 0.0015 10.7 0.0 15 38 172 195 166 195 0.88 # 5825 # 6412 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.257 1_12 - 198 HTH_5 PF01022.15 47 0.00046 12.3 0.0 1 1 6.9e-05 0.00098 11.3 0.0 16 41 161 186 149 188 0.80 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_18 - 190 DUF1700 PF08006.6 181 3.4e-64 207.8 14.0 1 1 5.4e-66 3.9e-64 207.7 14.0 1 181 1 185 1 185 0.98 # 19075 # 19644 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.239 2_14 - 254 HTH_CodY PF08222.6 61 0.0001 14.1 0.1 1 1 4.6e-06 0.00033 12.5 0.1 8 29 5 26 2 55 0.87 # 11072 # 11833 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.243 2_1 - 183 Terminase_5 PF06056.7 58 9.4e-05 14.4 0.1 1 1 7.5e-06 0.00018 13.5 0.1 1 31 147 178 147 179 0.92 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 1_12 - 198 Terminase_5 PF06056.7 58 0.00032 12.7 0.1 1 1 2.5e-05 0.00059 11.9 0.1 7 36 154 183 153 194 0.88 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_9 - 194 Terminase_5 PF06056.7 58 0.00047 12.2 0.1 1 1 3.8e-05 0.00089 11.3 0.1 7 36 154 183 153 189 0.91 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 1_12 - 198 HTH_24 PF13412.1 48 2.1e-11 35.5 0.2 1 1 2.2e-12 3.8e-11 34.7 0.2 1 44 145 187 145 188 0.97 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_9 - 194 HTH_24 PF13412.1 48 5.4e-10 31.0 0.2 1 1 5.4e-11 9.6e-10 30.2 0.2 1 41 145 184 145 188 0.96 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 2_1 - 183 HTH_24 PF13412.1 48 1.4e-07 23.3 0.1 1 1 9.4e-08 1.7e-06 19.8 0.0 12 39 155 182 152 182 0.93 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 3_9 - 102 HTH_24 PF13412.1 48 3.8e-05 15.5 0.4 1 1 1.3e-05 0.00023 13.0 0.0 18 36 2 20 2 21 0.93 # 7691 # 7996 # 1 # ID=3_9;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.386 2_1 - 183 HTH_AsnC-type PF13404.1 42 1.6e-06 20.0 0.2 1 1 1.4e-07 4.8e-06 18.5 0.0 17 38 160 181 152 182 0.86 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 2_9 - 194 HTH_AsnC-type PF13404.1 42 0.00025 13.0 0.0 1 1 1.5e-05 0.00053 12.0 0.0 3 41 147 184 145 185 0.87 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 2_5 - 612 IstB_IS21 PF01695.12 178 0.00039 12.3 0.2 1 2 0.00027 0.019 6.8 0.0 41 63 9 33 4 35 0.87 # 1660 # 3495 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.245 2_5 - 612 IstB_IS21 PF01695.12 178 0.00039 12.3 0.2 2 2 0.0066 0.47 2.3 0.0 93 121 127 155 92 167 0.81 # 1660 # 3495 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.245 2_1 - 183 HTH_IclR PF09339.5 52 6.9e-05 14.9 0.0 1 1 6.8e-06 0.00016 13.7 0.0 18 39 160 181 152 182 0.89 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 1_12 - 198 HTH_IclR PF09339.5 52 0.0001 14.4 0.0 1 1 1.2e-05 0.00029 12.9 0.0 8 43 152 185 150 187 0.84 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_9 - 194 HTH_IclR PF09339.5 52 0.00019 13.5 0.0 1 1 2e-05 0.00048 12.2 0.0 7 43 151 185 150 188 0.85 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 2_11 - 286 DUF2422 PF10337.4 459 0.00054 11.2 1.7 1 1 1.5e-05 0.0011 10.2 1.7 158 208 76 127 59 128 0.91 # 8316 # 9173 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.301 3_9 - 102 HTH_10 PF04967.7 53 8.4e-05 14.6 0.0 1 1 4.6e-06 0.00016 13.7 0.0 25 41 3 19 1 21 0.91 # 7691 # 7996 # 1 # ID=3_9;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.386 2_1 - 183 HTH_10 PF04967.7 53 0.00021 13.3 0.0 1 1 1.1e-05 0.0004 12.4 0.0 22 44 159 181 157 182 0.89 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 2_10 - 204 HTH_7 PF02796.10 45 7.3e-23 72.7 1.2 1 1 9.3e-24 1.1e-22 72.1 0.2 1 45 147 199 147 199 0.96 # 7555 # 8166 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 1_12 - 198 HTH_7 PF02796.10 45 8.2e-21 66.1 0.1 1 1 1.5e-21 1.8e-20 65.0 0.1 1 44 140 183 140 184 0.98 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_9 - 194 HTH_7 PF02796.10 45 5.6e-20 63.5 0.2 1 1 1e-20 1.2e-19 62.4 0.2 1 44 140 183 140 184 0.98 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 2_1 - 183 HTH_7 PF02796.10 45 4.9e-09 28.4 0.8 1 1 7.1e-10 8.4e-09 27.7 0.8 1 42 140 181 140 182 0.93 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 2_8 - 196 HTH_7 PF02796.10 45 7e-08 24.7 0.1 1 1 1.3e-08 1.5e-07 23.7 0.1 1 42 152 193 152 195 0.91 # 5825 # 6412 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.257 3_4 - 215 HTH_7 PF02796.10 45 1.3e-05 17.5 0.1 1 1 2.7e-06 3.2e-05 16.2 0.1 1 43 150 200 150 201 0.94 # 4210 # 4854 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_20 - 576 SbcCD_C PF13558.1 90 1.8e-05 17.1 0.4 1 2 0.014 1 1.8 0.1 27 40 470 483 456 486 0.75 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 1_20 - 576 SbcCD_C PF13558.1 90 1.8e-05 17.1 0.4 2 2 5.6e-06 0.0004 12.8 0.0 63 88 493 518 487 520 0.88 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 2_9 - 194 HTH_DeoR PF08220.7 57 5.3e-05 15.2 0.0 1 1 6.8e-06 0.00012 14.1 0.0 16 41 162 187 149 190 0.83 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 1_12 - 198 HTH_DeoR PF08220.7 57 0.00012 14.0 0.0 1 1 2.1e-05 0.00037 12.5 0.0 17 41 163 187 149 189 0.85 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_1 - 183 HTH_DeoR PF08220.7 57 0.00018 13.5 0.1 1 1 2.7e-05 0.00048 12.1 0.1 6 33 152 179 148 182 0.87 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 1_7 - 221 HTH_DeoR PF08220.7 57 0.00031 12.7 0.1 1 1 3.7e-05 0.00066 11.7 0.0 4 38 71 105 68 121 0.91 # 5655 # 6317 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.348 2_1 - 183 LacI PF00356.16 46 0.00012 14.1 2.0 1 1 3.1e-06 0.00022 13.3 0.4 1 20 162 181 162 182 0.88 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 4_2 - 275 Rep_3 PF01051.16 222 9.1e-47 151.9 15.6 1 1 1.7e-48 1.2e-46 151.5 15.6 15 222 5 207 1 207 0.93 # 1325 # 2149 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AAAA;rbs_spacer=4bp;gc_cont=0.265 1_12 - 198 Phage_antitermQ PF06530.7 126 0.0004 12.4 0.0 1 2 0.056 2 0.5 0.0 52 94 58 100 37 112 0.82 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 1_12 - 198 Phage_antitermQ PF06530.7 126 0.0004 12.4 0.0 2 2 9.1e-05 0.0032 9.5 0.0 62 103 144 185 141 191 0.90 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_9 - 194 Phage_antitermQ PF06530.7 126 0.00058 11.9 0.0 1 2 0.043 1.5 0.8 0.0 52 95 58 101 37 112 0.83 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 2_9 - 194 Phage_antitermQ PF06530.7 126 0.00058 11.9 0.0 2 2 0.00016 0.0058 8.7 0.0 62 101 144 183 141 189 0.90 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 1_20 - 576 AAA_14 PF13173.1 128 0.00013 14.4 3.5 1 2 4.1e-06 0.00029 13.2 0.1 3 47 364 408 362 433 0.72 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 1_20 - 576 AAA_14 PF13173.1 128 0.00013 14.4 3.5 2 2 0.04 2.8 0.3 0.1 52 72 488 504 445 564 0.57 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 5_5 - 74 DNA_ligase_ZBD PF03119.11 28 0.002 10.3 4.1 1 2 0.00041 0.029 6.6 0.5 1 7 24 30 24 31 0.93 # 2689 # 2910 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.261 5_5 - 74 DNA_ligase_ZBD PF03119.11 28 0.002 10.3 4.1 2 2 0.0013 0.091 5.0 0.2 2 9 51 58 50 63 0.87 # 2689 # 2910 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.261 1_20 - 576 AAA PF00004.24 132 6.6e-06 18.8 0.6 1 1 2.8e-06 0.0001 15.0 0.6 3 113 368 535 366 552 0.65 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 1_10 - 272 AAA PF00004.24 132 1.4e-05 17.8 1.0 1 1 1.2e-05 0.00043 12.9 1.0 3 110 32 166 31 189 0.65 # 10926 # 11741 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.303 1_19 - 108 DUF3116 PF11313.3 85 0.00016 13.7 0.4 1 1 3.5e-06 0.00025 13.1 0.4 8 84 10 88 3 89 0.80 # 19637 # 19960 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.306 1_20 - 576 AAA_10 PF12846.2 304 0.00011 14.1 0.0 1 1 4.1e-06 0.00029 12.7 0.0 4 24 366 386 363 403 0.81 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 1_9 - 327 ACP_syn_III_C PF08541.5 90 5e-34 108.7 0.0 1 1 2.6e-35 1.8e-33 106.9 0.0 1 90 235 324 235 324 0.99 # 9728 # 10708 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.332 1_10 - 272 DEAD PF00270.24 169 0.00089 11.2 1.7 1 1 4.1e-05 0.0029 9.5 1.7 111 144 120 152 29 235 0.86 # 10926 # 11741 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.303 1_20 - 576 AAA_16 PF13191.1 185 1.9e-05 17.1 0.0 1 1 7.2e-07 5.1e-05 15.7 0.0 20 44 359 382 350 391 0.81 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 5_5 - 74 zf-ribbon_3 PF13248.1 26 9.6e-05 14.0 1.4 1 2 0.00018 0.012 7.3 0.2 3 11 23 32 21 42 0.77 # 2689 # 2910 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.261 5_5 - 74 zf-ribbon_3 PF13248.1 26 9.6e-05 14.0 1.4 2 2 0.00042 0.03 6.1 0.1 3 10 49 56 47 61 0.79 # 2689 # 2910 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.261 2_10 - 204 HTH_23 PF13384.1 50 2.1e-09 29.3 0.3 1 1 5.3e-10 4.7e-09 28.2 0.0 4 39 162 197 159 201 0.89 # 7555 # 8166 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 2_1 - 183 HTH_23 PF13384.1 50 1.8e-08 26.3 0.1 1 1 3.4e-09 3e-08 25.6 0.1 5 39 147 182 143 182 0.89 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 1_12 - 198 HTH_23 PF13384.1 50 5.1e-08 24.9 0.0 1 1 1.4e-08 1.3e-07 23.6 0.0 13 43 156 185 151 193 0.87 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_9 - 194 HTH_23 PF13384.1 50 5.4e-08 24.8 0.0 1 1 1.4e-08 1.3e-07 23.6 0.0 13 42 156 185 150 190 0.86 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 1_11 - 481 HTH_23 PF13384.1 50 6e-07 21.5 0.0 1 1 1.7e-07 1.5e-06 20.2 0.0 3 49 18 65 16 66 0.91 # 11734 # 13176 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 2_14 - 254 HTH_23 PF13384.1 50 8.7e-05 14.6 0.0 1 1 1.9e-05 0.00017 13.7 0.0 18 42 2 26 2 37 0.84 # 11072 # 11833 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.243 3_9 - 102 HTH_23 PF13384.1 50 0.00012 14.1 0.0 1 1 2.8e-05 0.00025 13.2 0.0 19 36 3 20 2 25 0.92 # 7691 # 7996 # 1 # ID=3_9;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.386 2_8 - 196 HTH_23 PF13384.1 50 0.00051 12.2 0.0 1 1 0.00011 0.001 11.2 0.0 10 38 164 193 154 195 0.83 # 5825 # 6412 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.257 2_6 - 138 SAM_MT PF04445.8 235 1.1e-05 17.1 0.1 1 1 1.9e-07 1.3e-05 16.8 0.1 9 110 34 135 29 137 0.83 # 3879 # 4292 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.297 1_20 - 576 T2SE PF00437.15 272 7.8e-05 14.0 0.1 1 1 2.3e-06 0.00016 13.0 0.1 114 150 349 385 314 408 0.80 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 1_24 - 85 Acetyltransf_7 PF13508.1 79 2.7e-06 20.0 0.0 1 1 6.5e-08 4.6e-06 19.2 0.0 3 41 50 84 48 84 0.93 # 23896 # 24150 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.259 2_1 - 183 Sigma70_ECF PF07638.6 185 0.00033 12.8 0.0 1 1 8.5e-06 0.0006 11.9 0.0 150 172 159 181 142 182 0.79 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 2_8 - 196 UPF0122 PF04297.9 101 2.4e-05 16.8 2.2 1 1 3e-06 7.1e-05 15.3 0.2 24 55 163 194 158 195 0.90 # 5825 # 6412 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.257 1_12 - 198 UPF0122 PF04297.9 101 0.00016 14.1 0.1 1 1 1.9e-05 0.00045 12.7 0.0 19 59 146 186 142 190 0.88 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_9 - 194 UPF0122 PF04297.9 101 0.00019 13.9 0.1 1 1 2.4e-05 0.00058 12.3 0.0 19 59 146 186 142 190 0.86 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 1_13 - 127 S-AdoMet_synt_M PF02772.11 120 0.0005 12.5 1.9 1 2 1.6e-05 0.0012 11.3 0.9 65 106 22 62 3 74 0.77 # 14005 # 14385 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.255 1_13 - 127 S-AdoMet_synt_M PF02772.11 120 0.0005 12.5 1.9 2 2 0.043 3 0.3 0.0 63 90 88 115 69 126 0.62 # 14005 # 14385 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.255 3_9 - 102 HTH_6 PF01418.12 77 7.4e-05 14.9 0.0 1 2 7.1e-06 0.00051 12.2 0.0 35 53 2 20 1 21 0.94 # 7691 # 7996 # 1 # ID=3_9;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.386 3_9 - 102 HTH_6 PF01418.12 77 7.4e-05 14.9 0.0 2 2 0.04 2.8 0.2 0.1 13 28 61 76 40 86 0.75 # 7691 # 7996 # 1 # ID=3_9;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.386 2_14 - 254 TIGR02168 TIGR02168 1181 6e-06 16.3 36.6 1 1 1e-07 7.3e-06 16.0 36.6 253 436 49 231 23 245 0.72 # 11072 # 11833 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.243 1_9 - 327 Thiolase_N PF00108.18 264 2.3e-07 22.4 0.0 1 1 5.6e-09 3.9e-07 21.7 0.0 11 126 38 152 35 182 0.88 # 9728 # 10708 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.332 5_5 - 74 zinc_ribbon_5 PF13719.1 37 0.00013 14.0 3.4 1 2 8.4e-06 0.0006 11.9 0.3 14 37 11 34 5 34 0.72 # 2689 # 2910 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.261 5_5 - 74 zinc_ribbon_5 PF13719.1 37 0.00013 14.0 3.4 2 2 3.1e-05 0.0022 10.1 3.3 4 32 24 55 18 57 0.70 # 2689 # 2910 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.261 5_5 - 74 zinc_ribbon_4 PF13717.1 36 0.00031 12.9 3.5 1 1 4e-05 0.0029 9.8 3.5 4 32 24 55 22 57 0.74 # 2689 # 2910 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.261 2_9 - 194 HTH_11 PF08279.7 55 7.9e-09 27.6 0.1 1 1 2.6e-09 1.9e-08 26.4 0.1 4 41 151 186 147 189 0.81 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 1_12 - 198 HTH_11 PF08279.7 55 1.3e-08 26.9 0.1 1 1 4.4e-09 3.1e-08 25.7 0.1 5 41 152 186 147 189 0.82 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_1 - 183 HTH_11 PF08279.7 55 5.2e-08 24.9 0.2 1 1 2.2e-08 1.5e-07 23.4 0.3 6 37 152 182 147 182 0.87 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 2_8 - 196 HTH_11 PF08279.7 55 8.1e-07 21.1 0.5 1 1 2.2e-07 1.6e-06 20.2 0.1 2 37 161 194 160 195 0.87 # 5825 # 6412 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.257 1_7 - 221 HTH_11 PF08279.7 55 2e-06 19.9 0.0 1 1 5.6e-07 4e-06 18.9 0.0 1 42 68 108 68 112 0.91 # 5655 # 6317 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.348 1_2 - 242 HTH_11 PF08279.7 55 3.6e-06 19.0 0.6 1 1 3.2e-06 2.3e-05 16.5 0.0 21 40 2 21 1 26 0.93 # 1283 # 2008 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.281 2_14 - 254 HTH_11 PF08279.7 55 1.8e-05 16.8 0.0 1 1 1.2e-05 8.7e-05 14.6 0.0 17 40 3 26 2 31 0.92 # 11072 # 11833 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.243 3_9 - 102 HTH_11 PF08279.7 55 2.6e-05 16.3 0.4 1 1 1.7e-05 0.00012 14.1 0.0 16 34 2 20 1 21 0.92 # 7691 # 7996 # 1 # ID=3_9;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.386 2_10 - 204 HTH_11 PF08279.7 55 0.00016 13.7 0.1 1 1 8.6e-05 0.00061 11.9 0.1 18 34 178 194 166 195 0.77 # 7555 # 8166 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 4_1 - 204 HTH_11 PF08279.7 55 0.00049 12.2 0.3 1 1 0.00019 0.0013 10.8 0.3 7 34 9 35 5 36 0.84 # 666 # 1277 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.283 3_9 - 102 SpoIIID PF12116.3 82 3.2e-05 16.3 0.3 1 2 2.9e-06 0.0001 14.7 0.2 21 64 3 54 1 68 0.74 # 7691 # 7996 # 1 # ID=3_9;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.386 3_9 - 102 SpoIIID PF12116.3 82 3.2e-05 16.3 0.3 2 2 0.015 0.55 2.7 0.1 43 64 33 54 24 96 0.77 # 7691 # 7996 # 1 # ID=3_9;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.386 2_1 - 183 SpoIIID PF12116.3 82 0.00011 14.6 0.5 1 1 5.4e-06 0.00019 13.8 0.5 12 38 153 179 143 182 0.85 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 1_11 - 481 HTH_28 PF13518.1 52 1.9e-11 36.3 0.0 1 1 4.6e-12 6.5e-11 34.6 0.0 1 49 21 70 21 74 0.93 # 11734 # 13176 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 2_10 - 204 HTH_28 PF13518.1 52 1.3e-08 27.3 0.0 1 1 2.1e-09 3e-08 26.1 0.0 4 34 167 197 166 200 0.94 # 7555 # 8166 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 2_1 - 183 HTH_28 PF13518.1 52 5.7e-07 22.0 0.1 1 1 6.9e-08 9.8e-07 21.2 0.1 2 34 149 182 148 182 0.91 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 2_9 - 194 HTH_28 PF13518.1 52 2.8e-05 16.6 0.0 1 1 4.7e-06 6.7e-05 15.3 0.0 8 38 156 186 152 190 0.93 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 1_12 - 198 HTH_28 PF13518.1 52 5.3e-05 15.7 0.0 1 1 9.6e-06 0.00014 14.4 0.0 8 37 156 185 155 190 0.92 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_14 - 254 HlyD PF00529.15 305 8.8e-06 17.6 10.0 1 1 1.6e-07 1.1e-05 17.2 10.0 43 135 106 197 85 237 0.85 # 11072 # 11833 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.243 5_5 - 74 Glutaredoxin PF00462.19 60 0.00023 13.6 0.5 1 2 0.00073 0.052 6.1 0.1 5 14 21 30 15 34 0.84 # 2689 # 2910 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.261 5_5 - 74 Glutaredoxin PF00462.19 60 0.00023 13.6 0.5 2 2 0.00073 0.052 6.1 0.0 8 23 50 65 47 73 0.80 # 2689 # 2910 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.261 3_8 - 175 V-ATPase_G PF03179.10 105 0.00016 14.4 0.5 1 1 2.2e-06 0.00016 14.4 0.5 23 73 42 92 35 102 0.87 # 7155 # 7679 # 1 # ID=3_8;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.390 1_12 - 198 HTH_Tnp_4 PF13613.1 53 8.6e-05 14.5 0.0 1 1 5e-06 0.00018 13.5 0.0 24 45 165 186 159 187 0.90 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_9 - 194 HTH_Tnp_4 PF13613.1 53 0.00046 12.2 0.0 1 1 2.6e-05 0.00094 11.2 0.0 24 43 165 184 159 186 0.88 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 1_20 - 576 cobW PF02492.14 178 7e-05 14.7 0.7 1 2 4.7e-05 0.0017 10.3 0.0 4 20 367 383 365 404 0.89 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 1_20 - 576 cobW PF02492.14 178 7e-05 14.7 0.7 2 2 0.013 0.45 2.3 0.1 33 63 514 552 497 571 0.57 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 1_10 - 272 cobW PF02492.14 178 0.00062 11.7 0.2 1 1 4e-05 0.0014 10.5 0.1 126 171 102 156 63 162 0.72 # 10926 # 11741 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.303 2_1 - 183 IF2_N PF04760.10 54 4.4e-05 15.6 0.2 1 1 2e-06 0.00014 13.9 0.2 2 24 159 181 158 182 0.91 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 2_1 - 183 HTH_AraC PF00165.18 42 2.1e-05 16.8 0.0 1 2 0.01 0.73 2.3 0.0 31 40 65 74 65 76 0.85 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 2_1 - 183 HTH_AraC PF00165.18 42 2.1e-05 16.8 0.0 2 2 1.1e-05 0.00077 11.8 0.0 7 30 159 182 157 182 0.92 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 2_10 - 204 CENP-B_N PF04218.8 53 3e-08 25.5 2.1 1 2 0.00038 0.027 6.4 0.3 13 35 117 139 115 142 0.85 # 7555 # 8166 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 2_10 - 204 CENP-B_N PF04218.8 53 3e-08 25.5 2.1 2 2 6.3e-08 4.5e-06 18.5 0.1 14 49 167 202 166 203 0.90 # 7555 # 8166 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 2_1 - 183 GntR PF00392.16 64 0.00012 13.9 0.0 1 1 6.7e-06 0.00024 13.0 0.0 8 45 147 181 143 182 0.80 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 3_9 - 102 GntR PF00392.16 64 0.00028 12.8 0.1 1 2 6.8e-05 0.0024 9.8 0.0 24 42 2 19 1 20 0.90 # 7691 # 7996 # 1 # ID=3_9;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.386 3_9 - 102 GntR PF00392.16 64 0.00028 12.8 0.1 2 2 0.072 2.6 0.1 0.0 4 16 40 52 36 56 0.56 # 7691 # 7996 # 1 # ID=3_9;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.386 2_1 - 183 HTH_Tnp_ISL3 PF13542.1 52 1.2e-07 23.3 0.0 1 1 2.7e-09 1.9e-07 22.7 0.0 12 48 144 181 143 182 0.95 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 3_6 - 150 HMGL-like PF00682.14 237 0.00034 12.7 0.0 1 1 5.9e-06 0.00042 12.4 0.0 46 135 30 121 20 134 0.80 # 5514 # 5963 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.351 2_15 - 312 YTH PF04146.10 140 4.9e-05 15.4 0.1 1 1 1.4e-06 0.0001 14.4 0.1 36 117 55 143 38 157 0.70 # 12273 # 13208 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.257 5_8 - 90 DUF836 PF05768.9 81 0.0003 13.5 0.5 1 1 5e-06 0.00036 13.3 0.5 32 74 26 80 8 87 0.77 # 4384 # 4653 # 1 # ID=5_8;partial=01;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.319 1_11 - 481 rve_3 PF13683.1 67 3e-06 19.2 0.3 1 1 2.9e-07 2.1e-05 16.5 0.0 2 61 258 328 257 333 0.74 # 11734 # 13176 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 2_1 - 183 TetR_N PF00440.18 47 1.5e-05 17.0 0.1 1 1 1.7e-06 2.4e-05 16.4 0.1 16 35 160 179 158 180 0.94 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 3_9 - 102 TetR_N PF00440.18 47 0.0003 12.9 0.0 1 1 4.9e-05 0.0007 11.7 0.0 17 35 2 20 2 21 0.91 # 7691 # 7996 # 1 # ID=3_9;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.386 1_12 - 198 TetR_N PF00440.18 47 0.0003 12.9 0.1 1 1 8.8e-05 0.0012 10.9 0.0 16 36 160 180 158 180 0.92 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_9 - 194 TetR_N PF00440.18 47 0.00031 12.8 0.1 1 1 8.6e-05 0.0012 10.9 0.0 16 36 160 180 158 180 0.92 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 2_8 - 196 TetR_N PF00440.18 47 0.00044 12.4 0.0 1 1 6.3e-05 0.00089 11.4 0.0 18 36 174 192 171 192 0.94 # 5825 # 6412 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.257 5_5 - 74 Zn-ribbon_8 PF09723.5 42 3.7e-05 16.1 1.5 1 2 0.00022 0.016 7.7 0.2 28 34 24 30 10 35 0.69 # 2689 # 2910 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.261 5_5 - 74 Zn-ribbon_8 PF09723.5 42 3.7e-05 16.1 1.5 2 2 3.2e-06 0.00023 13.6 1.4 8 34 25 56 18 60 0.86 # 2689 # 2910 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.261 1_11 - 481 rve PF00665.21 120 2.1e-27 88.1 0.0 1 1 5.7e-29 4.1e-27 87.1 0.0 2 119 156 285 155 286 0.89 # 11734 # 13176 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 2_9 - 194 HTH_Mga PF08280.6 59 0.00056 12.1 1.8 1 1 9.5e-06 0.00067 11.9 0.5 2 44 144 185 143 187 0.91 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 4_1 - 204 HTH_25 PF13413.1 62 6.4e-05 15.0 0.1 1 1 1.7e-06 0.00012 14.2 0.1 4 34 10 40 8 59 0.94 # 666 # 1277 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.283 2_4 - 39 HTH_Tnp_1 PF01527.15 76 2.4e-09 29.5 0.0 1 1 1e-10 2.4e-09 29.5 0.0 5 42 2 38 1 38 0.96 # 1425 # 1541 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.256 1_11 - 481 HTH_Tnp_1 PF01527.15 76 5e-05 15.7 0.0 1 1 4.4e-06 0.0001 14.7 0.0 11 57 21 68 14 95 0.82 # 11734 # 13176 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 2_1 - 183 HTH_Tnp_1 PF01527.15 76 7.8e-05 15.1 0.0 1 1 5.8e-06 0.00014 14.3 0.0 8 41 145 178 139 179 0.91 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 3_8 - 175 TIGR00019 TIGR00019 361 0.0035 8.3 4.7 1 1 6.6e-05 0.0047 7.9 4.7 15 100 4 87 2 91 0.89 # 7155 # 7679 # 1 # ID=3_8;partial=00;start_type=TTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.390 5_6 - 128 Phage_terminase PF10668.4 60 0.00013 14.2 0.2 1 2 8.1e-06 0.00057 12.1 0.1 3 43 16 58 14 62 0.79 # 3181 # 3564 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.383 5_6 - 128 Phage_terminase PF10668.4 60 0.00013 14.2 0.2 2 2 0.067 4.8 -0.4 0.0 31 42 83 94 70 105 0.75 # 3181 # 3564 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.383 2_1 - 183 HTH_38 PF13936.1 44 2.7e-10 32.2 0.3 1 1 8.2e-11 1.2e-09 30.1 0.3 11 42 150 182 141 182 0.85 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 1_12 - 198 HTH_38 PF13936.1 44 2.9e-06 19.2 0.0 1 1 5.5e-07 7.8e-06 17.9 0.0 6 41 146 181 142 183 0.86 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_10 - 204 HTH_38 PF13936.1 44 5.2e-06 18.4 1.7 1 1 7e-07 1e-05 17.5 0.1 15 39 170 194 160 198 0.93 # 7555 # 8166 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 2_9 - 194 HTH_38 PF13936.1 44 5.2e-06 18.4 0.0 1 1 9e-07 1.3e-05 17.2 0.0 13 41 153 181 143 183 0.86 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 2_14 - 254 HTH_38 PF13936.1 44 0.0007 11.6 1.3 1 1 0.00013 0.0018 10.3 0.0 21 39 2 20 2 25 0.86 # 11072 # 11833 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.243 2_10 - 204 Sigma70_r4 PF04545.11 50 4.5e-05 15.2 0.1 1 1 3.9e-06 9.3e-05 14.2 0.1 9 42 160 197 157 198 0.94 # 7555 # 8166 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 2_1 - 183 Sigma70_r4 PF04545.11 50 9.6e-05 14.1 0.0 1 1 7.5e-06 0.00018 13.3 0.0 14 37 154 177 146 182 0.85 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 2_8 - 196 Sigma70_r4 PF04545.11 50 0.0001 14.0 0.0 1 1 1.2e-05 0.00028 12.7 0.0 10 36 162 188 158 191 0.92 # 5825 # 6412 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.257 1_19 - 108 HTH_27 PF13463.1 68 0.00031 13.5 0.0 1 1 1.3e-05 0.00045 13.0 0.0 24 68 32 78 11 78 0.84 # 19637 # 19960 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.306 1_13 - 127 HTH_27 PF13463.1 68 0.00045 13.0 0.0 1 1 7.9e-05 0.0028 10.4 0.0 4 54 11 64 8 70 0.92 # 14005 # 14385 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.255 1_14 - 554 SprT-like PF10263.4 157 7.7e-05 14.8 0.0 1 1 2.6e-06 0.00019 13.6 0.0 7 71 113 174 108 177 0.85 # 14375 # 16036 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 2_9 - 194 HTH_Tnp_IS630 PF01710.11 120 7.4e-05 14.9 0.0 1 1 6e-06 0.00014 13.9 0.0 17 50 159 192 135 193 0.87 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 1_12 - 198 HTH_Tnp_IS630 PF01710.11 120 0.00015 13.9 0.0 1 1 1.3e-05 0.00031 12.9 0.0 17 46 159 188 146 196 0.80 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_10 - 204 HTH_Tnp_IS630 PF01710.11 120 0.00019 13.6 0.1 1 1 2.1e-05 0.0005 12.2 0.1 9 37 166 194 162 201 0.91 # 7555 # 8166 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 2_9 - 194 HTH_40 PF14493.1 91 4.6e-05 16.1 0.0 1 1 5.2e-06 9.3e-05 15.1 0.0 8 42 155 189 153 192 0.90 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 1_12 - 198 HTH_40 PF14493.1 91 8.1e-05 15.3 0.0 1 1 9e-06 0.00016 14.3 0.0 8 41 155 188 153 194 0.88 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_10 - 204 HTH_40 PF14493.1 91 8.9e-05 15.1 0.1 1 1 1.4e-05 0.00025 13.7 0.1 7 31 169 193 165 195 0.92 # 7555 # 8166 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 2_1 - 183 HTH_40 PF14493.1 91 0.00018 14.2 0.1 1 1 2.7e-05 0.00047 12.8 0.1 8 31 154 178 147 181 0.87 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 4_1 - 204 HTH_3 PF01381.17 55 1.5e-13 42.8 0.3 1 1 1e-14 2.4e-13 42.2 0.3 2 55 9 61 8 61 0.95 # 666 # 1277 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.283 3_9 - 102 HTH_3 PF01381.17 55 5.7e-06 18.6 0.3 1 1 6.3e-07 1.5e-05 17.3 0.0 10 28 2 20 1 20 0.94 # 7691 # 7996 # 1 # ID=3_9;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.386 2_1 - 183 HTH_3 PF01381.17 55 1.3e-05 17.4 0.1 1 1 1.3e-06 3.1e-05 16.3 0.1 1 28 152 179 152 179 0.89 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 5_5 - 74 Zn_Tnp_IS1 PF03811.8 36 8e-05 14.6 0.8 1 2 0.00083 0.059 5.4 0.1 7 13 24 30 18 35 0.85 # 2689 # 2910 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.261 5_5 - 74 Zn_Tnp_IS1 PF03811.8 36 8e-05 14.6 0.8 2 2 0.00013 0.0096 7.9 0.1 6 15 49 58 48 66 0.81 # 2689 # 2910 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.261 1_12 - 198 TrmB PF01978.14 68 4.9e-07 21.9 0.0 1 1 7.8e-08 1.1e-06 20.7 0.0 22 49 160 187 145 189 0.82 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_9 - 194 TrmB PF01978.14 68 3.8e-06 19.0 0.0 1 1 6.5e-07 9.2e-06 17.8 0.0 8 48 147 186 144 188 0.77 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 2_1 - 183 TrmB PF01978.14 68 5.1e-06 18.6 0.2 1 1 7.2e-07 1e-05 17.7 0.2 17 44 155 182 147 182 0.91 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 2_8 - 196 TrmB PF01978.14 68 0.00024 13.2 0.1 1 1 3.8e-05 0.00054 12.1 0.1 21 44 171 194 166 195 0.89 # 5825 # 6412 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.257 2_10 - 204 TrmB PF01978.14 68 0.00066 11.9 0.8 1 1 0.00012 0.0017 10.5 0.2 19 42 172 195 163 196 0.83 # 7555 # 8166 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.324 2_5 - 612 KAP_NTPase PF07693.9 325 1e-37 122.2 11.5 1 1 1.4e-39 1e-37 122.2 11.5 3 324 3 273 1 274 0.89 # 1660 # 3495 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.245 2_5 - 612 Sigma54_activ_2 PF14532.1 138 2.7e-06 19.9 0.0 1 2 0.0051 0.36 3.3 0.0 19 37 15 33 1 56 0.79 # 1660 # 3495 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.245 2_5 - 612 Sigma54_activ_2 PF14532.1 138 2.7e-06 19.9 0.0 2 2 3.6e-06 0.00026 13.5 0.0 53 125 126 201 110 212 0.81 # 1660 # 3495 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.245 4_1 - 204 HTH_26 PF13443.1 63 5.9e-08 25.3 0.0 1 1 1.5e-09 1e-07 24.5 0.0 4 59 10 63 7 67 0.93 # 666 # 1277 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.283 4_2 - 275 TrfA PF07042.6 282 3e-05 15.3 0.2 1 1 6.4e-07 4.5e-05 14.7 0.2 52 189 11 152 7 165 0.85 # 1325 # 2149 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AAAA;rbs_spacer=4bp;gc_cont=0.265 5_5 - 74 DUF2387 PF09526.5 71 0.00025 13.4 0.6 1 1 6.1e-06 0.00043 12.7 0.6 10 40 24 55 20 68 0.82 # 2689 # 2910 # 1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.261 2_12 - 352 G_glu_transpept PF01019.16 510 2.6e-56 183.5 0.1 1 1 4.6e-58 3.3e-56 183.1 0.1 142 494 15 334 3 348 0.86 # 9422 # 10477 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.287 1_20 - 576 ABC_tran PF00005.22 137 2.6e-34 110.9 0.5 1 1 3.7e-36 2.6e-34 110.9 0.5 1 137 353 504 353 504 0.94 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 1_14 - 554 Peptidase_M48 PF01435.13 226 0.00011 14.2 0.1 1 1 5.8e-06 0.00041 12.3 0.0 63 129 140 203 80 236 0.76 # 14375 # 16036 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.265 1_20 - 576 SMC_N PF02463.14 220 7.5e-07 21.0 9.1 1 2 0.00017 0.012 7.2 0.2 27 44 366 383 344 394 0.76 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 1_20 - 576 SMC_N PF02463.14 220 7.5e-07 21.0 9.1 2 2 3.6e-08 2.5e-06 19.2 0.5 108 210 430 545 411 551 0.88 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 2_9 - 194 Trp_repressor PF01371.14 88 1.4e-05 17.4 0.6 1 1 5.4e-06 9.6e-05 14.7 0.1 39 81 150 192 146 193 0.89 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 2_1 - 183 Trp_repressor PF01371.14 88 2.4e-05 16.7 0.5 1 2 0.0078 0.14 4.6 0.0 6 36 90 120 87 128 0.82 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 2_1 - 183 Trp_repressor PF01371.14 88 2.4e-05 16.7 0.5 2 2 0.00018 0.0032 9.9 0.1 47 68 158 179 148 182 0.84 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 1_12 - 198 Trp_repressor PF01371.14 88 2.5e-05 16.6 0.3 1 1 1.1e-05 0.0002 13.7 0.0 39 80 150 191 146 196 0.89 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 3_4 - 215 Trp_repressor PF01371.14 88 0.00052 12.4 0.0 1 1 7.7e-05 0.0014 11.0 0.0 40 80 170 209 168 212 0.89 # 4210 # 4854 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.361 1_20 - 576 AAA_29 PF13555.1 62 4.1e-06 18.8 0.1 1 1 1.4e-07 9.6e-06 17.6 0.1 16 41 357 381 351 386 0.82 # 20040 # 21767 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.237 1_1 - 280 RepA_N PF06970.6 76 4.7e-35 111.7 3.0 1 1 4.5e-36 1.6e-34 110.0 3.0 1 76 15 90 15 90 0.99 # 1 # 840 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.229 2_15 - 312 RepA_N PF06970.6 76 3.8e-34 108.8 6.4 1 2 1.1e-35 3.8e-34 108.8 6.4 1 76 15 90 15 90 0.99 # 12273 # 13208 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.257 2_15 - 312 RepA_N PF06970.6 76 3.8e-34 108.8 6.4 2 2 0.032 1.1 1.6 0.5 35 62 179 206 164 216 0.84 # 12273 # 13208 # 1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.257 1_9 - 327 FAE1_CUT1_RppA PF08392.7 290 7e-07 20.9 0.0 1 1 2.2e-08 1.5e-06 19.8 0.0 75 204 45 169 8 177 0.82 # 9728 # 10708 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.332 1_11 - 481 LZ_Tnp_IS481 PF13011.1 85 0.00041 13.2 0.0 1 1 1.3e-05 0.00089 12.1 0.0 24 59 32 67 22 77 0.88 # 11734 # 13176 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 5_6 - 128 TIGR02135 TIGR02135 212 6.9e-05 14.6 0.0 1 1 1.5e-06 0.00011 14.0 0.0 83 126 76 120 73 127 0.80 # 3181 # 3564 # 1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.383 2_1 - 183 HTH_32 PF13565.1 77 3.1e-07 23.6 0.1 1 1 3.4e-08 4.8e-07 23.0 0.1 17 77 129 181 121 181 0.84 # 136 # 684 # -1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.275 1_11 - 481 HTH_32 PF13565.1 77 1.2e-06 21.8 0.0 1 1 2e-07 2.9e-06 20.5 0.0 1 76 49 125 49 126 0.83 # 11734 # 13176 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 2_9 - 194 HTH_32 PF13565.1 77 1.3e-05 18.5 0.3 1 1 1.7e-06 2.4e-05 17.5 0.3 19 77 131 181 118 181 0.80 # 6879 # 7460 # 1 # ID=2_9;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.326 1_12 - 198 HTH_32 PF13565.1 77 2.1e-05 17.7 0.2 1 1 3.4e-06 4.8e-05 16.6 0.2 19 77 131 181 118 181 0.80 # 13148 # 13741 # -1 # ID=1_12;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.333 2_8 - 196 HTH_32 PF13565.1 77 0.00032 14.0 0.1 1 1 4.1e-05 0.00059 13.1 0.1 19 77 143 193 132 193 0.75 # 5825 # 6412 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.257 # # Program: hmmsearch # Version: 3.1b2 (February 2015) # Pipeline mode: SEARCH # Query file: /tmp/f944fc6c-117b-4685-923c-07acefe79fe8 # Target file: checkm_output/bins/pGCA_000007645.1.assembled/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pGCA_000007645.1.assembled/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/f944fc6c-117b-4685-923c-07acefe79fe8 checkm_output/bins/pGCA_000007645.1.assembled/genes.faa # Current dir: /mnt/DGK_KLIF/data/klif/reads-for-assembly/trainingsets2/Staphylococcus/training_20210111 # Date: Mon Jan 11 14:51:13 2021 # [ok]