# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_19 - 264 ATP-synt_ab PF00006.20 215 0.00012 15.6 0.1 1 1 1.7e-06 0.00035 14.0 0.1 6 60 39 149 36 255 0.71 # 13377 # 14168 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.514 4_5 - 208 HTH_IclR PF09339.5 52 0.00032 14.2 0.1 1 1 3.1e-06 0.00063 13.3 0.1 7 48 8 48 7 51 0.91 # 3176 # 3799 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.413 2_18 - 233 ABC_tran PF00005.22 137 2.7e-35 115.6 0.0 1 1 5e-37 3.4e-35 115.2 0.0 1 136 17 161 17 162 0.90 # 12676 # 13374 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 2_19 - 264 ABC_tran PF00005.22 137 4.6e-30 98.6 0.1 1 1 1.2e-31 8.3e-30 97.8 0.1 1 136 38 192 38 193 0.96 # 13377 # 14168 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.514 3_23 - 351 ABC_tran PF00005.22 137 0.00034 14.8 0.0 1 1 1.1e-05 0.00077 13.7 0.0 14 117 99 225 95 229 0.56 # 18510 # 19562 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 1_124 - 468 FAD_binding_3 PF01494.14 356 9e-06 18.8 0.1 1 1 1.1e-07 2.3e-05 17.5 0.1 2 162 2 174 1 208 0.66 # 109417 # 110820 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.588 1_115 - 418 HHH_5 PF14520.1 60 0.00054 14.1 0.0 1 1 1.9e-05 0.0039 11.3 0.0 9 45 180 216 169 226 0.85 # 102206 # 103459 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.525 1_47 - 559 N6_Mtase PF02384.11 311 0.00011 15.3 0.0 1 1 9.6e-07 0.0002 14.4 0.0 76 138 433 493 400 512 0.87 # 48442 # 50118 # 1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.506 1_126 - 469 rve_3 PF13683.1 67 0.0001 15.7 0.4 1 1 1.6e-06 0.00034 14.1 0.1 11 56 247 295 237 295 0.86 # 112309 # 113715 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.510 3_23 - 351 Sigma54_activat PF00158.21 168 2.2e-05 17.9 0.0 1 1 1.6e-06 0.00032 14.1 0.0 17 115 91 184 77 219 0.60 # 18510 # 19562 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 1_126 - 469 HTH_Tnp_Tc3_2 PF01498.13 72 0.00087 13.3 0.1 1 1 1.2e-05 0.0024 11.9 0.1 12 55 93 133 82 140 0.83 # 112309 # 113715 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.510 1_108 - 695 FtsK_SpoIIIE PF01580.13 205 1.5e-06 21.7 0.1 1 2 1.5e-06 0.00031 14.1 0.0 23 80 182 236 168 243 0.82 # 93267 # 95351 # -1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.452 1_108 - 695 FtsK_SpoIIIE PF01580.13 205 1.5e-06 21.7 0.1 2 2 0.001 0.21 4.9 0.0 170 204 511 542 502 543 0.81 # 93267 # 95351 # -1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.452 1_124 - 468 FAD_oxidored PF12831.2 428 1.2e-10 34.9 0.2 1 1 9.4e-13 1.9e-10 34.2 0.2 1 139 3 173 3 181 0.58 # 109417 # 110820 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.588 3_27 - 595 UvrD-helicase PF00580.16 315 4.1e-30 99.0 7.3 1 3 7.7e-17 1.6e-14 47.8 0.1 2 106 5 92 4 119 0.87 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 3_27 - 595 UvrD-helicase PF00580.16 315 4.1e-30 99.0 7.3 2 3 3.9e-18 8e-16 52.1 0.7 210 314 147 248 111 249 0.84 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 3_27 - 595 UvrD-helicase PF00580.16 315 4.1e-30 99.0 7.3 3 3 0.0086 1.8 1.7 0.1 114 190 418 494 367 583 0.74 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 4_5 - 208 HTH_34 PF13601.1 80 2.6e-08 27.8 0.4 1 2 4.2e-08 8.7e-06 19.7 0.0 2 49 6 53 5 60 0.91 # 3176 # 3799 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.413 4_5 - 208 HTH_34 PF13601.1 80 2.6e-08 27.8 0.4 2 2 0.00072 0.15 6.1 0.1 59 74 191 206 184 207 0.90 # 3176 # 3799 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.413 4_5 - 208 MarR PF01047.17 59 0.00035 14.2 0.1 1 1 8.2e-06 0.0017 12.0 0.1 6 48 7 49 4 52 0.88 # 3176 # 3799 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.413 2_8 - 407 TBPIP PF07106.8 169 0.031 7.7 42.9 1 4 0.003 0.61 3.5 16.3 59 166 131 235 130 238 0.86 # 5414 # 6634 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.474 2_8 - 407 TBPIP PF07106.8 169 0.031 7.7 42.9 2 4 0.009 1.8 2.0 12.5 82 148 189 253 179 257 0.73 # 5414 # 6634 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.474 2_8 - 407 TBPIP PF07106.8 169 0.031 7.7 42.9 3 4 0.0002 0.042 7.3 10.4 68 146 252 328 237 343 0.54 # 5414 # 6634 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.474 2_8 - 407 TBPIP PF07106.8 169 0.031 7.7 42.9 4 4 0.0006 0.12 5.8 1.6 67 110 342 385 336 392 0.89 # 5414 # 6634 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.474 1_124 - 468 Pyr_redox_3 PF13738.1 203 1.6e-07 25.5 0.0 1 1 1.6e-08 3.4e-06 21.2 0.0 1 141 5 187 5 191 0.74 # 109417 # 110820 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.588 1_108 - 695 DUF853 PF05872.7 504 0.00014 14.2 0.0 1 2 1.9e-06 0.00039 12.7 0.0 10 60 187 237 179 240 0.86 # 93267 # 95351 # -1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.452 1_108 - 695 DUF853 PF05872.7 504 0.00014 14.2 0.0 2 2 0.071 15 -2.4 0.0 257 279 503 525 495 556 0.71 # 93267 # 95351 # -1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.452 4_2 - 223 TetR_N PF00440.18 47 3.2e-18 59.1 0.0 1 1 5.2e-20 5.3e-18 58.4 0.0 2 47 44 89 43 89 0.96 # 507 # 1175 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.326 4_4 - 208 TetR_N PF00440.18 47 6.9e-18 58.0 0.0 1 2 1.7e-18 1.7e-16 53.5 0.0 2 47 10 55 9 55 0.97 # 2575 # 3198 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.402 4_4 - 208 TetR_N PF00440.18 47 6.9e-18 58.0 0.0 2 2 0.016 1.6 2.4 0.0 1 15 169 183 169 185 0.86 # 2575 # 3198 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.402 3_27 - 595 AAA_19 PF13245.1 76 8.5e-08 25.8 0.0 1 1 2.6e-09 2.6e-07 24.3 0.0 4 74 13 85 9 87 0.76 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 2_19 - 264 AAA_19 PF13245.1 76 0.0053 10.5 1.6 1 2 0.00035 0.036 7.8 0.5 13 31 52 68 41 73 0.83 # 13377 # 14168 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_19 - 264 AAA_19 PF13245.1 76 0.0053 10.5 1.6 2 2 0.097 9.9 -0.0 0.0 19 48 191 219 178 244 0.71 # 13377 # 14168 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_20 - 418 CbiA PF01656.18 195 2.1e-20 66.8 0.0 1 1 1.5e-22 3e-20 66.3 0.0 1 188 117 358 117 365 0.74 # 20244 # 21497 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.431 1_44 - 275 MethyltransfD12 PF02086.10 260 1.1e-53 176.3 0.0 1 1 5.8e-56 1.2e-53 176.1 0.0 1 259 10 255 10 256 0.93 # 45837 # 46661 # -1 # ID=1_44;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478 2_34 - 252 Rep_3 PF01051.16 222 3.6e-50 164.5 0.0 1 1 6e-52 4.1e-50 164.3 0.0 3 222 16 242 14 242 0.91 # 29948 # 30703 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.483 1_39 - 292 Rep_3 PF01051.16 222 1.2e-25 84.4 1.5 1 1 2.7e-27 1.8e-25 83.7 1.5 4 220 24 276 21 280 0.86 # 41310 # 42185 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.434 1_51 - 294 Rep_3 PF01051.16 222 4.1e-18 59.7 0.0 1 1 1.1e-19 7.4e-18 58.8 0.0 9 211 30 278 23 286 0.82 # 54963 # 55844 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.459 1_126 - 469 rve PF00665.21 120 7e-11 36.2 0.0 1 1 7.6e-13 1.6e-10 35.1 0.0 4 119 142 265 139 266 0.88 # 112309 # 113715 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.510 2_23 - 233 Fe_dep_repress PF01325.14 60 0.00015 15.6 0.0 1 1 9.7e-06 0.001 13.0 0.0 24 59 37 72 32 73 0.91 # 18242 # 18940 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_51 - 294 Fe_dep_repress PF01325.14 60 0.00041 14.2 0.1 1 1 1.5e-05 0.0016 12.3 0.0 26 58 245 277 241 278 0.91 # 54963 # 55844 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.459 2_19 - 264 AAA_23 PF13476.1 202 4.6e-07 24.2 0.1 1 1 7.7e-09 7.9e-07 23.5 0.1 2 40 30 69 29 179 0.75 # 13377 # 14168 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_18 - 233 AAA_23 PF13476.1 202 1.3e-05 19.5 0.1 1 1 2.1e-07 2.2e-05 18.8 0.1 11 40 18 48 2 54 0.79 # 12676 # 13374 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 1_47 - 559 Methyltransf_26 PF13659.1 117 1.5e-10 35.1 0.1 1 1 3.3e-12 3.4e-10 33.9 0.1 1 116 421 517 421 518 0.83 # 48442 # 50118 # 1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.506 2_22 - 424 Methyltransf_26 PF13659.1 117 0.0013 12.7 0.3 1 1 4.8e-05 0.0049 10.8 0.1 15 81 257 323 254 372 0.80 # 16905 # 18176 # -1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.529 4_6 - 129 ACT_7 PF13840.1 65 0.00014 15.3 0.1 1 1 2e-06 0.00042 13.8 0.0 9 60 65 120 57 123 0.74 # 3870 # 4256 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.388 3_27 - 595 AAA_30 PF13604.1 196 1.2e-05 18.9 0.0 1 3 1.1e-05 0.0022 11.5 0.0 4 66 6 66 4 84 0.76 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 3_27 - 595 AAA_30 PF13604.1 196 1.2e-05 18.9 0.0 2 3 0.0031 0.63 3.5 0.0 95 133 191 228 168 287 0.77 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 3_27 - 595 AAA_30 PF13604.1 196 1.2e-05 18.9 0.0 3 3 0.065 13 -0.9 0.0 64 88 409 432 399 443 0.79 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 2_19 - 264 SMC_N PF02463.14 220 5.1e-10 32.8 0.0 1 1 1.3e-11 1.4e-09 31.4 0.0 6 213 31 237 25 243 0.77 # 13377 # 14168 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_18 - 233 SMC_N PF02463.14 220 0.0016 11.6 0.1 1 1 3.5e-05 0.0036 10.4 0.1 25 75 28 75 20 182 0.86 # 12676 # 13374 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 1_71 - 792 TIGR02432 TIGR02432 189 0.00048 13.7 0.4 1 1 5.3e-06 0.0011 12.5 0.1 2 40 77 115 76 146 0.72 # 70290 # 72665 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.564 1_31 - 171 rRNA_methylase PF06962.7 140 0.00056 13.6 0.0 1 1 3.8e-06 0.00077 13.1 0.0 65 113 32 76 28 121 0.73 # 34803 # 35315 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.394 1_108 - 695 TraG-D_C PF12696.2 128 4e-11 36.8 0.1 1 1 4.1e-13 8.4e-11 35.8 0.1 2 111 505 616 504 630 0.82 # 93267 # 95351 # -1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.452 1_20 - 418 MipZ PF09140.6 261 8.3e-10 32.0 0.1 1 2 8.1e-07 0.00017 14.7 0.1 2 26 116 140 115 161 0.75 # 20244 # 21497 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.431 1_20 - 418 MipZ PF09140.6 261 8.3e-10 32.0 0.1 2 2 9.4e-07 0.00019 14.4 0.0 71 126 230 287 215 297 0.75 # 20244 # 21497 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.431 1_21 - 371 DDE_Tnp_1 PF01609.16 213 1.7e-31 103.3 0.0 1 1 2.2e-33 2.2e-31 102.9 0.0 2 213 107 348 106 348 0.96 # 21949 # 23061 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.520 5_1 - 348 DDE_Tnp_1 PF01609.16 213 1.2e-27 90.8 0.0 1 1 1.7e-29 1.8e-27 90.2 0.0 4 210 59 296 56 299 0.93 # 1 # 1044 # 1 # ID=5_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.452 4_6 - 129 ACT PF01842.20 66 1.9e-07 24.4 0.2 1 2 0.011 2.2 1.9 0.0 6 26 7 27 3 47 0.85 # 3870 # 4256 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.388 4_6 - 129 ACT PF01842.20 66 1.9e-07 24.4 0.2 2 2 1.6e-08 3.3e-06 20.5 0.0 9 29 78 98 74 115 0.91 # 3870 # 4256 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.388 3_27 - 595 AAA_12 PF13087.1 200 9.1e-09 28.9 0.1 1 3 0.00013 0.026 7.8 0.0 99 152 34 86 15 95 0.84 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 3_27 - 595 AAA_12 PF13087.1 200 9.1e-09 28.9 0.1 2 3 0.0048 0.98 2.6 0.0 5 38 240 273 237 377 0.81 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 3_27 - 595 AAA_12 PF13087.1 200 9.1e-09 28.9 0.1 3 3 1.4e-06 0.0003 14.1 0.0 143 195 499 562 415 567 0.82 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 2_18 - 233 AAA_21 PF13304.1 303 3.2e-11 37.6 0.0 1 1 6e-11 6.1e-09 30.1 0.0 1 287 29 181 29 190 0.81 # 12676 # 13374 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 2_19 - 264 AAA_21 PF13304.1 303 1.6e-10 35.3 0.5 1 2 2.2e-07 2.3e-05 18.4 0.0 3 19 52 68 52 91 0.86 # 13377 # 14168 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_19 - 264 AAA_21 PF13304.1 303 1.6e-10 35.3 0.5 2 2 1.9e-06 0.00019 15.4 0.1 165 283 118 208 95 219 0.78 # 13377 # 14168 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_126 - 469 Sigma70_r4 PF04545.11 50 0.00015 15.0 0.2 1 2 0.0018 0.38 4.1 0.1 19 43 26 50 17 53 0.86 # 112309 # 113715 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.510 1_126 - 469 Sigma70_r4 PF04545.11 50 0.00015 15.0 0.2 2 2 0.00014 0.028 7.7 0.0 11 44 82 120 74 121 0.84 # 112309 # 113715 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.510 1_19 - 336 Phage_CI_repr PF07022.8 66 0.00063 13.8 0.0 1 1 5.9e-06 0.0012 12.9 0.0 5 45 166 239 165 318 0.80 # 19240 # 20247 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.400 3_23 - 351 AAA PF00004.24 132 9.2e-05 16.6 0.0 1 1 2e-06 0.00021 15.4 0.0 1 73 99 177 99 215 0.69 # 18510 # 19562 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 2_19 - 264 AAA PF00004.24 132 0.00042 14.4 0.1 1 1 1.7e-05 0.0017 12.5 0.1 2 35 52 96 51 219 0.63 # 13377 # 14168 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_95 - 402 KorB PF08535.5 93 1.4e-05 19.1 0.0 1 2 0.013 2.8 2.2 0.0 45 66 65 86 60 105 0.84 # 83788 # 84993 # 1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.545 1_95 - 402 KorB PF08535.5 93 1.4e-05 19.1 0.0 2 2 2.7e-06 0.00056 14.0 0.0 5 47 170 212 166 246 0.86 # 83788 # 84993 # 1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.545 4_5 - 208 HTH_27 PF13463.1 68 0.00011 16.5 0.3 1 1 2.3e-06 0.00046 14.4 0.0 8 48 9 48 5 61 0.85 # 3176 # 3799 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.413 3_23 - 351 TIGR00382 TIGR00382 414 0.0013 11.4 0.0 1 1 9.4e-06 0.0019 10.8 0.0 120 194 99 174 59 181 0.71 # 18510 # 19562 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 1_13 - 345 Hydantoinase_A PF01968.13 290 1.3e-07 24.9 0.5 1 2 1.9e-06 0.00039 13.5 0.1 73 101 187 214 177 221 0.82 # 14959 # 15993 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_13 - 345 Hydantoinase_A PF01968.13 290 1.3e-07 24.9 0.5 2 2 3.8e-05 0.0077 9.2 0.0 209 275 272 332 235 342 0.79 # 14959 # 15993 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 2_18 - 233 AAA_16 PF13191.1 185 1.6e-07 25.4 0.0 1 1 2.8e-09 2.9e-07 24.6 0.0 14 82 18 98 14 206 0.60 # 12676 # 13374 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 2_19 - 264 AAA_16 PF13191.1 185 3.1e-05 17.9 0.7 1 1 8.4e-07 8.6e-05 16.5 0.7 17 158 40 190 32 256 0.51 # 13377 # 14168 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_19 - 264 AAA_22 PF13401.1 131 2.1e-05 18.6 0.5 1 1 8.4e-06 0.00043 14.4 0.5 8 99 52 195 48 226 0.53 # 13377 # 14168 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_108 - 695 AAA_22 PF13401.1 131 0.00012 16.1 0.1 1 2 0.00015 0.0076 10.3 0.0 5 24 199 218 198 296 0.70 # 93267 # 95351 # -1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.452 1_108 - 695 AAA_22 PF13401.1 131 0.00012 16.1 0.1 2 2 0.027 1.4 3.0 0.0 87 124 503 537 458 545 0.76 # 93267 # 95351 # -1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.452 2_18 - 233 AAA_22 PF13401.1 131 0.00014 15.9 0.1 1 2 6e-05 0.0031 11.6 0.1 5 25 28 48 24 71 0.90 # 12676 # 13374 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 2_18 - 233 AAA_22 PF13401.1 131 0.00014 15.9 0.1 2 2 0.045 2.3 2.3 0.0 87 122 146 190 104 192 0.72 # 12676 # 13374 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 3_23 - 351 AAA_22 PF13401.1 131 0.00096 13.2 0.3 1 1 0.00011 0.0058 10.7 0.0 6 30 98 122 96 159 0.81 # 18510 # 19562 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 3_7 - 76 TilS PF09179.6 69 0.00033 14.6 0.2 1 1 1.9e-06 0.0004 14.3 0.2 15 53 36 75 28 75 0.92 # 4489 # 4716 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.500 4_1 - 139 HTH_AraC PF00165.18 42 2.2e-21 69.1 2.3 1 2 2.6e-12 5.4e-10 32.8 0.0 1 42 37 78 37 78 0.97 # 78 # 494 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.357 4_1 - 139 HTH_AraC PF00165.18 42 2.2e-21 69.1 2.3 2 2 3.6e-13 7.3e-11 35.6 1.1 2 42 90 128 89 128 0.95 # 78 # 494 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.357 3_27 - 595 TIGR01074 TIGR01074 668 7.1e-54 176.7 1.9 1 1 7.7e-55 1.6e-52 172.2 1.9 5 610 7 563 5 586 0.79 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 1_47 - 559 Methyltransf_27 PF13708.1 194 3.8e-58 190.1 0.1 1 1 8.6e-60 5.9e-58 189.5 0.1 2 194 93 296 92 296 0.95 # 48442 # 50118 # 1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.506 2_10 - 152 Methyltransf_27 PF13708.1 194 1.8e-17 57.4 0.0 1 1 3.3e-19 2.3e-17 57.1 0.0 3 82 72 150 70 151 0.97 # 6994 # 7449 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.504 2_9 - 63 Methyltransf_27 PF13708.1 194 1.6e-08 28.2 0.0 1 1 2.4e-10 1.6e-08 28.2 0.0 152 194 16 58 4 58 0.88 # 6637 # 6825 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.471 2_19 - 264 AAA_29 PF13555.1 62 1.5e-05 18.4 0.0 1 1 2.9e-07 2.9e-05 17.5 0.0 26 44 51 69 35 84 0.80 # 13377 # 14168 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_18 - 233 AAA_29 PF13555.1 62 5.2e-05 16.7 0.1 1 1 9e-07 9.2e-05 15.9 0.1 17 44 22 48 15 59 0.78 # 12676 # 13374 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 1_124 - 468 Pyr_redox PF00070.22 80 1.8e-07 25.5 0.0 1 2 6.3e-07 0.00013 16.3 0.0 2 33 4 35 3 53 0.87 # 109417 # 110820 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.588 1_124 - 468 Pyr_redox PF00070.22 80 1.8e-07 25.5 0.0 2 2 0.0012 0.24 5.8 0.0 44 70 132 158 116 166 0.80 # 109417 # 110820 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.588 1_125 - 309 HTH_1 PF00126.22 60 5.2e-19 61.7 0.2 1 1 1.1e-20 1.1e-18 60.7 0.2 1 59 3 61 3 62 0.98 # 110918 # 111844 # -1 # ID=1_125;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 4_9 - 42 HTH_1 PF00126.22 60 5.4e-15 48.9 0.1 1 1 5.5e-17 5.7e-15 48.8 0.1 1 38 3 40 3 41 0.96 # 6449 # 6574 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_126 - 469 LZ_Tnp_IS481 PF13011.1 85 3.3e-06 21.3 0.1 1 1 6.4e-08 1.3e-05 19.4 0.1 14 61 16 63 9 78 0.86 # 112309 # 113715 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.510 2_24 - 1205 CPSase_L_D2 PF02786.12 211 2.5e-65 213.6 0.0 1 1 2.5e-67 5.1e-65 212.6 0.0 2 208 116 321 116 324 0.98 # 18953 # 22567 # -1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.596 1_124 - 468 HI0933_like PF03486.9 409 9.2e-14 44.6 2.1 1 3 1.5e-08 3e-06 19.8 0.1 2 33 3 34 2 38 0.94 # 109417 # 110820 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.588 1_124 - 468 HI0933_like PF03486.9 409 9.2e-14 44.6 2.1 2 3 1e-09 2.1e-07 23.6 0.0 72 164 85 182 66 186 0.84 # 109417 # 110820 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.588 1_124 - 468 HI0933_like PF03486.9 409 9.2e-14 44.6 2.1 3 3 0.051 10 -1.7 0.2 376 388 416 428 399 452 0.71 # 109417 # 110820 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.588 1_126 - 469 HTH_32 PF13565.1 77 2e-10 35.3 0.7 1 1 5.5e-12 1.1e-09 32.9 0.0 3 77 45 117 43 117 0.82 # 112309 # 113715 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.510 3_27 - 595 TIGR00609 TIGR00609 1175 6.1e-16 51.2 5.9 1 3 1.1e-06 0.00022 12.9 0.0 11 67 18 71 12 81 0.86 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 3_27 - 595 TIGR00609 TIGR00609 1175 6.1e-16 51.2 5.9 2 3 1.9e-11 4e-09 28.6 0.1 376 458 194 276 190 284 0.87 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 3_27 - 595 TIGR00609 TIGR00609 1175 6.1e-16 51.2 5.9 3 3 2.2e-05 0.0045 8.6 0.9 781 812 533 564 340 570 0.92 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 2_23 - 233 GntR PF00392.16 64 2e-17 56.4 0.0 1 1 3.6e-19 7.4e-17 54.5 0.0 1 64 13 75 13 75 0.98 # 18242 # 18940 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_126 - 469 HTH_23 PF13384.1 50 2.3e-10 33.8 0.1 1 1 1.4e-11 1.4e-09 31.3 0.1 2 48 11 58 10 60 0.94 # 112309 # 113715 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.510 4_4 - 208 HTH_23 PF13384.1 50 0.00051 13.6 0.0 1 1 1.3e-05 0.0013 12.3 0.0 10 39 13 47 11 56 0.81 # 2575 # 3198 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.402 1_20 - 418 Fer4_NifH PF00142.13 273 0.00078 12.6 0.1 1 1 8.1e-06 0.0017 11.5 0.0 7 59 122 177 116 207 0.77 # 20244 # 21497 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.431 3_23 - 351 Mg_chelatase PF01078.16 207 0.00012 15.1 0.1 1 2 0.002 0.2 4.6 0.0 24 47 98 121 88 140 0.84 # 18510 # 19562 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 3_23 - 351 Mg_chelatase PF01078.16 207 0.00012 15.1 0.1 2 2 0.00013 0.013 8.5 0.0 88 143 142 199 134 239 0.77 # 18510 # 19562 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 2_18 - 233 Mg_chelatase PF01078.16 207 0.0014 11.7 0.1 1 1 2.5e-05 0.0026 10.8 0.0 24 51 29 56 6 83 0.77 # 12676 # 13374 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 1_126 - 469 HTH_29 PF13551.1 112 2.2e-16 53.9 0.4 1 1 2.4e-18 4.9e-16 52.8 0.4 1 110 16 119 16 121 0.87 # 112309 # 113715 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.510 1_124 - 468 GIDA PF01134.17 392 2.5e-05 17.1 3.7 1 3 3.3e-07 6.7e-05 15.8 0.2 1 29 3 35 3 52 0.80 # 109417 # 110820 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.588 1_124 - 468 GIDA PF01134.17 392 2.5e-05 17.1 3.7 2 3 0.02 4.2 -0.0 0.0 133 159 165 191 141 225 0.80 # 109417 # 110820 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.588 1_124 - 468 GIDA PF01134.17 392 2.5e-05 17.1 3.7 3 3 0.027 5.4 -0.4 0.9 331 388 390 458 388 462 0.64 # 109417 # 110820 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.588 2_24 - 1205 RimK PF08443.6 190 1.7e-07 24.8 0.0 1 1 2.3e-09 4.7e-07 23.3 0.0 9 119 121 236 115 316 0.65 # 18953 # 22567 # -1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.596 1_124 - 468 NAD_binding_8 PF13450.1 68 7.7e-07 23.0 0.0 1 1 1e-08 2.1e-06 21.6 0.0 1 49 6 56 6 74 0.80 # 109417 # 110820 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.588 2_19 - 264 Arch_ATPase PF01637.13 234 4.6e-05 17.1 0.0 1 1 6.2e-07 6.4e-05 16.6 0.0 21 118 49 142 36 219 0.75 # 13377 # 14168 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_18 - 233 Arch_ATPase PF01637.13 234 0.00071 13.2 0.0 1 1 1.1e-05 0.0011 12.5 0.0 16 39 23 46 19 76 0.91 # 12676 # 13374 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 3_27 - 595 PhoH PF02562.11 205 4.3e-05 16.7 0.1 1 2 5.4e-05 0.011 8.9 0.0 6 61 5 61 2 78 0.77 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 3_27 - 595 PhoH PF02562.11 205 4.3e-05 16.7 0.1 2 2 0.0006 0.12 5.4 0.0 118 173 188 242 155 258 0.74 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 3_23 - 351 AAA_5 PF07728.9 139 9.6e-39 126.2 0.0 1 1 7e-41 1.4e-38 125.6 0.0 1 139 98 238 98 238 0.97 # 18510 # 19562 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 3_27 - 595 ResIII PF04851.10 184 0.00024 14.9 0.4 1 1 4.3e-06 0.00088 13.0 0.0 19 77 12 77 5 97 0.74 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 1_71 - 792 PAPS_reduct PF01507.14 174 1.3e-08 28.7 0.0 1 1 1.3e-10 2.6e-08 27.8 0.0 3 149 78 263 76 267 0.73 # 70290 # 72665 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.564 1_108 - 695 TrwB_AAD_bind PF10412.4 386 1.7e-15 50.4 0.1 1 2 7.8e-07 0.00016 14.3 0.0 16 53 199 236 189 341 0.85 # 93267 # 95351 # -1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.452 1_108 - 695 TrwB_AAD_bind PF10412.4 386 1.7e-15 50.4 0.1 2 2 1e-12 2e-10 33.7 0.0 183 375 433 640 403 647 0.70 # 93267 # 95351 # -1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.452 1_20 - 418 TIGR01968 TIGR01968 261 2.1e-05 17.5 0.1 1 2 3e-05 0.0061 9.5 0.2 3 39 116 155 114 184 0.83 # 20244 # 21497 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.431 1_20 - 418 TIGR01968 TIGR01968 261 2.1e-05 17.5 0.1 2 2 0.00049 0.1 5.5 0.0 103 143 251 291 222 320 0.77 # 20244 # 21497 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.431 1_13 - 345 MutL PF13941.1 457 0.00072 11.8 0.1 1 2 9.2e-06 0.0019 10.4 0.0 234 271 177 214 158 220 0.78 # 14959 # 15993 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 1_13 - 345 MutL PF13941.1 457 0.00072 11.8 0.1 2 2 0.058 12 -2.1 0.0 39 58 270 289 258 306 0.70 # 14959 # 15993 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 2_19 - 264 TIGR00611 TIGR00611 365 2e-05 17.5 0.0 1 1 6.4e-07 6.5e-05 15.8 0.0 7 47 31 72 23 96 0.81 # 13377 # 14168 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_18 - 233 TIGR00611 TIGR00611 365 5.3e-05 16.1 0.0 1 1 6.5e-07 6.7e-05 15.7 0.0 24 73 28 77 18 122 0.86 # 12676 # 13374 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 1_115 - 418 IMS_HHH PF11798.3 32 1.4e-06 22.0 0.2 1 2 0.056 11 0.3 0.0 17 30 133 146 123 146 0.87 # 102206 # 103459 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.525 1_115 - 418 IMS_HHH PF11798.3 32 1.4e-06 22.0 0.2 2 2 8.6e-08 1.8e-05 18.6 0.1 14 32 179 197 168 197 0.85 # 102206 # 103459 # -1 # ID=1_115;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.525 1_19 - 336 DsrH PF04077.7 88 0.0009 12.9 0.0 1 2 0.012 2.5 1.8 0.0 53 62 88 97 71 104 0.76 # 19240 # 20247 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.400 1_19 - 336 DsrH PF04077.7 88 0.0009 12.9 0.0 2 2 0.0001 0.021 8.5 0.0 26 65 105 145 97 152 0.78 # 19240 # 20247 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.400 2_18 - 233 DUF258 PF03193.11 161 4.3e-05 16.7 0.1 1 1 6.9e-07 7.1e-05 15.9 0.1 35 67 27 59 13 76 0.81 # 12676 # 13374 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 2_19 - 264 DUF258 PF03193.11 161 0.00037 13.6 0.0 1 1 5.3e-06 0.00055 13.1 0.0 27 66 39 79 18 149 0.75 # 13377 # 14168 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_108 - 695 DUF87 PF01935.12 229 0.00023 14.9 0.0 1 1 2.5e-06 0.00052 13.8 0.0 25 68 200 242 185 281 0.87 # 93267 # 95351 # -1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.452 1_126 - 469 HTH_28 PF13518.1 52 4.2e-11 36.6 0.5 1 2 2.5e-12 5e-10 33.2 0.4 2 51 16 66 15 67 0.93 # 112309 # 113715 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.510 1_126 - 469 HTH_28 PF13518.1 52 4.2e-11 36.6 0.5 2 2 0.056 11 0.1 0.0 17 32 99 116 84 120 0.86 # 112309 # 113715 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.510 4_4 - 208 HTH_Tnp_1_2 PF13022.1 142 0.00021 15.1 0.0 1 1 1.7e-06 0.00034 14.3 0.0 26 77 15 64 2 68 0.78 # 2575 # 3198 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.402 4_5 - 208 HTH_24 PF13412.1 48 1.3e-06 21.6 0.1 1 1 2.6e-08 2.7e-06 20.7 0.1 3 48 4 49 2 49 0.90 # 3176 # 3799 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.413 2_23 - 233 HTH_24 PF13412.1 48 0.00077 12.8 0.0 1 1 2.3e-05 0.0024 11.2 0.0 21 48 39 66 34 66 0.94 # 18242 # 18940 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 3_23 - 351 Sigma54_activ_2 PF14532.1 138 0.00056 13.9 0.0 1 1 6e-06 0.0012 12.8 0.0 21 95 96 188 79 219 0.73 # 18510 # 19562 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 4_1 - 139 HTH_18 PF12833.2 81 1.6e-23 76.5 2.0 1 1 1.1e-25 2.2e-23 76.1 2.0 1 81 50 129 50 129 0.97 # 78 # 494 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.357 4_5 - 208 HTH_10 PF04967.7 53 0.0013 12.2 0.3 1 1 2.4e-05 0.0049 10.4 0.0 22 46 17 41 15 44 0.92 # 3176 # 3799 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.413 1_124 - 468 TIGR01292 TIGR01292 300 5e-07 22.4 0.0 1 2 4.8e-05 0.0098 8.3 0.0 2 31 3 32 2 49 0.77 # 109417 # 110820 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.588 1_124 - 468 TIGR01292 TIGR01292 300 5e-07 22.4 0.0 2 2 3.8e-06 0.00078 11.9 0.0 56 111 127 183 122 192 0.91 # 109417 # 110820 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.588 3_27 - 595 DEAD PF00270.24 169 0.00022 14.7 0.2 1 1 4.9e-06 0.001 12.5 0.2 5 78 9 80 5 218 0.62 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 2_24 - 1205 Dala_Dala_lig_C PF07478.8 203 2.4e-13 43.8 0.0 1 1 2.4e-15 4.9e-13 42.8 0.0 4 173 125 291 122 292 0.80 # 18953 # 22567 # -1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.596 3_27 - 595 UvrD_C_2 PF13538.1 104 4.9e-12 39.9 0.0 1 1 5.8e-14 1.2e-11 38.7 0.0 47 103 496 562 454 563 0.79 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 3_23 - 351 TIP49 PF06068.8 398 0.00073 12.2 0.0 1 2 9.1e-06 0.0019 10.8 0.0 40 82 87 128 80 144 0.79 # 18510 # 19562 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 3_23 - 351 TIP49 PF06068.8 398 0.00073 12.2 0.0 2 2 0.088 18 -2.3 0.0 336 363 234 261 223 278 0.84 # 18510 # 19562 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 1_20 - 418 HTH_OrfB_IS605 PF12323.3 46 0.00023 14.4 0.1 1 2 0.00067 0.14 5.5 0.1 24 38 40 54 40 56 0.90 # 20244 # 21497 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.431 1_20 - 418 HTH_OrfB_IS605 PF12323.3 46 0.00023 14.4 0.1 2 2 0.00015 0.031 7.6 0.0 17 38 53 74 52 76 0.86 # 20244 # 21497 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.431 1_51 - 294 HTH_36 PF13730.1 55 4.1e-05 17.6 0.0 1 2 0.0046 0.47 4.6 0.0 28 48 119 139 96 139 0.87 # 54963 # 55844 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.459 1_51 - 294 HTH_36 PF13730.1 55 4.1e-05 17.6 0.0 2 2 7e-05 0.0072 10.4 0.0 6 55 218 271 216 271 0.75 # 54963 # 55844 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.459 1_20 - 418 HTH_36 PF13730.1 55 0.00027 15.0 0.1 1 1 1.2e-05 0.0012 12.9 0.0 28 54 52 78 34 79 0.91 # 20244 # 21497 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.431 1_13 - 345 StbA PF06406.6 318 5.8e-123 403.7 0.7 1 1 3.3e-125 6.7e-123 403.5 0.7 1 317 22 340 22 341 0.98 # 14959 # 15993 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.421 2_18 - 233 NACHT PF05729.7 166 0.0005 13.7 0.3 1 1 4.2e-06 0.00085 12.9 0.3 3 21 30 48 28 57 0.88 # 12676 # 13374 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 2_18 - 233 UPF0079 PF02367.12 123 0.0017 11.9 0.0 1 1 1.4e-05 0.0028 11.2 0.0 12 37 24 49 15 82 0.89 # 12676 # 13374 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 3_23 - 351 AAA_17 PF13207.1 121 0.00081 14.2 0.0 1 1 2.4e-05 0.0024 12.6 0.0 2 46 99 141 98 195 0.74 # 18510 # 19562 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 2_19 - 264 AAA_17 PF13207.1 121 0.0016 13.2 0.3 1 1 4.8e-05 0.0049 11.6 0.3 3 17 52 66 51 249 0.92 # 13377 # 14168 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_18 - 233 TIGR02211 TIGR02211 221 2.1e-26 86.4 0.0 1 1 2.3e-28 2.4e-26 86.2 0.0 18 219 14 212 1 214 0.88 # 12676 # 13374 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 2_19 - 264 TIGR02211 TIGR02211 221 1.4e-22 73.9 0.4 1 1 1.7e-24 1.7e-22 73.6 0.4 18 219 35 241 22 243 0.84 # 13377 # 14168 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.514 1_124 - 468 FAD_binding_2 PF00890.19 417 4.9e-36 118.3 0.5 1 1 3e-38 6.2e-36 118.0 0.5 1 408 3 431 3 442 0.80 # 109417 # 110820 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.588 2_18 - 233 AAA_25 PF13481.1 194 6.4e-05 16.3 0.1 1 2 9.7e-07 0.0002 14.7 0.0 31 55 25 49 15 81 0.83 # 12676 # 13374 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 2_18 - 233 AAA_25 PF13481.1 194 6.4e-05 16.3 0.1 2 2 0.082 17 -1.4 0.0 166 186 170 190 142 193 0.59 # 12676 # 13374 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 3_27 - 595 Viral_helicase1 PF01443.13 234 3.8e-07 23.7 0.1 1 3 0.0042 0.87 2.9 0.0 2 21 20 39 19 79 0.77 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 3_27 - 595 Viral_helicase1 PF01443.13 234 3.8e-07 23.7 0.1 2 3 0.022 4.5 0.6 0.0 40 135 167 261 142 290 0.69 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 3_27 - 595 Viral_helicase1 PF01443.13 234 3.8e-07 23.7 0.1 3 3 3.6e-07 7.4e-05 16.2 0.0 181 233 504 563 417 564 0.88 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 2_18 - 233 AAA_15 PF13175.1 415 0.00015 14.8 0.0 1 1 2e-06 0.00021 14.3 0.0 20 49 22 68 8 89 0.81 # 12676 # 13374 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 2_19 - 264 AAA_15 PF13175.1 415 0.0013 11.6 0.0 1 1 1.8e-05 0.0019 11.2 0.0 8 43 34 75 25 148 0.73 # 13377 # 14168 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_24 - 1205 ATP-grasp PF02222.17 172 2.3e-07 24.2 0.0 1 1 2.6e-09 5.3e-07 23.0 0.0 9 142 132 274 123 293 0.75 # 18953 # 22567 # -1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.596 4_4 - 208 CENP-B_N PF04218.8 53 0.001 12.4 0.0 1 1 1e-05 0.002 11.5 0.0 26 51 28 53 23 55 0.90 # 2575 # 3198 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.402 4_1 - 139 Ribosomal_S8 PF00410.14 129 0.0027 11.5 1.8 1 2 0.0059 1.2 2.9 0.1 41 73 2 29 1 35 0.56 # 78 # 494 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.357 4_1 - 139 Ribosomal_S8 PF00410.14 129 0.0027 11.5 1.8 2 2 0.00012 0.025 8.4 0.1 50 87 90 128 50 135 0.79 # 78 # 494 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.357 1_47 - 559 MTS PF05175.9 170 6.1e-07 22.9 0.0 1 1 5.2e-09 1.1e-06 22.1 0.0 60 144 444 520 433 543 0.70 # 48442 # 50118 # 1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.506 4_5 - 208 HTH_45 PF14947.1 77 0.00014 15.6 0.2 1 2 1.8e-05 0.0018 12.0 0.0 10 53 8 55 5 76 0.75 # 3176 # 3799 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.413 4_5 - 208 HTH_45 PF14947.1 77 0.00014 15.6 0.2 2 2 0.09 9.2 0.2 0.0 55 65 190 200 177 204 0.79 # 3176 # 3799 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.413 1_43 - 274 HTH_45 PF14947.1 77 0.0002 15.1 0.1 1 1 8e-06 0.00082 13.1 0.0 1 51 183 235 183 248 0.85 # 45001 # 45822 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.450 3_23 - 351 AAA_2 PF07724.9 171 5.7e-07 23.5 0.0 1 1 5.8e-09 1.2e-06 22.5 0.0 5 83 98 177 96 184 0.71 # 18510 # 19562 # -1 # ID=3_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.425 1_124 - 468 AlaDh_PNT_C PF01262.16 168 3.6e-05 17.3 0.0 1 2 9.4e-07 0.00019 14.9 0.0 23 69 4 50 2 91 0.84 # 109417 # 110820 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.588 1_124 - 468 AlaDh_PNT_C PF01262.16 168 3.6e-05 17.3 0.0 2 2 0.087 18 -1.2 0.0 14 44 112 143 107 146 0.77 # 109417 # 110820 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.588 2_4 - 476 DNA_methylase PF00145.12 335 3.9e-75 246.9 0.0 1 1 2.9e-77 5.9e-75 246.3 0.0 1 331 92 453 92 456 0.89 # 2072 # 3499 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.492 1_24 - 168 DDE_Tnp_IS1 PF03400.8 131 2.1e-79 257.9 0.8 1 1 8.6e-81 2.5e-79 257.7 0.8 1 131 37 167 37 167 0.99 # 25399 # 25902 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.546 1_85 - 168 DDE_Tnp_IS1 PF03400.8 131 4e-79 257.0 1.1 1 1 1.6e-80 4.7e-79 256.8 1.1 1 131 37 167 37 167 0.99 # 78025 # 78528 # -1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.536 2_33 - 168 DDE_Tnp_IS1 PF03400.8 131 1.8e-78 254.9 1.2 1 1 7.3e-80 2.1e-78 254.7 1.2 1 131 37 167 37 167 0.99 # 28873 # 29376 # -1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.534 1_27 - 168 DDE_Tnp_IS1 PF03400.8 131 1.1e-74 242.6 1.6 1 1 5.2e-76 1.5e-74 242.2 1.6 1 131 37 167 37 167 0.99 # 29580 # 30083 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.516 6_1 - 101 DDE_Tnp_IS1 PF03400.8 131 8.9e-43 139.5 0.4 1 1 3.6e-44 1.1e-42 139.2 0.4 1 71 31 101 31 101 0.99 # 2 # 304 # -1 # ID=6_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.574 1_1 - 37 DDE_Tnp_IS1 PF03400.8 131 2.2e-18 60.6 0.3 1 1 7.8e-20 2.3e-18 60.5 0.3 96 131 1 36 1 36 0.98 # 1 # 111 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.495 2_35 - 37 DDE_Tnp_IS1 PF03400.8 131 2.2e-18 60.6 0.3 1 1 7.8e-20 2.3e-18 60.5 0.3 96 131 1 36 1 36 0.98 # 31285 # 31395 # -1 # ID=2_35;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.495 1_71 - 792 ATP_bind_3 PF01171.15 182 0.0018 11.7 0.3 1 1 2.8e-05 0.0058 10.0 0.1 2 40 77 115 76 145 0.78 # 70290 # 72665 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.564 2_23 - 233 TFIIE_alpha PF02002.12 105 0.00053 13.4 0.0 1 2 0.00013 0.027 7.9 0.0 22 59 30 67 13 88 0.85 # 18242 # 18940 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 2_23 - 233 TFIIE_alpha PF02002.12 105 0.00053 13.4 0.0 2 2 0.0039 0.8 3.2 0.1 13 47 182 217 176 228 0.62 # 18242 # 18940 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 4_5 - 208 HTH_11 PF08279.7 55 0.0022 11.6 0.1 1 1 3.5e-05 0.0071 10.0 0.0 4 43 8 46 6 60 0.82 # 3176 # 3799 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.413 4_5 - 208 MarR_2 PF12802.2 62 0.00017 15.2 0.1 1 1 4.2e-06 0.00043 13.9 0.1 10 55 9 52 2 57 0.83 # 3176 # 3799 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.413 4_9 - 42 MarR_2 PF12802.2 62 0.0002 15.0 0.0 1 1 2e-06 0.0002 14.9 0.0 5 46 3 40 1 41 0.85 # 6449 # 6574 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 4_5 - 208 HTH_5 PF01022.15 47 1.4e-10 34.7 0.1 1 1 1.5e-12 3.1e-10 33.5 0.1 3 46 5 49 3 50 0.92 # 3176 # 3799 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.413 4_5 - 208 TrmB PF01978.14 68 2e-07 24.6 0.0 1 1 4.3e-09 4.4e-07 23.5 0.0 11 62 7 58 6 62 0.93 # 3176 # 3799 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.413 2_23 - 233 TrmB PF01978.14 68 0.00067 13.3 0.0 1 1 5.9e-05 0.006 10.3 0.0 24 57 37 70 30 84 0.86 # 18242 # 18940 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_124 - 468 Pyr_redox_2 PF07992.9 201 1.3e-08 28.8 0.1 1 1 3.2e-10 6.6e-08 26.6 0.1 1 120 3 182 3 427 0.88 # 109417 # 110820 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.588 2_24 - 1205 ATP-grasp_4 PF13535.1 184 8.8e-21 68.4 0.0 1 1 1.2e-22 2.5e-20 66.9 0.0 5 179 116 293 112 294 0.84 # 18953 # 22567 # -1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.596 4_2 - 223 UPF0122 PF04297.9 101 9.9e-05 16.3 1.4 1 1 1.1e-06 0.00023 15.1 1.4 3 76 29 102 26 125 0.83 # 507 # 1175 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.326 1_20 - 418 HTH_Crp_2 PF13545.1 76 0.00036 14.3 0.0 1 1 4.1e-06 0.00084 13.1 0.0 21 58 42 79 27 89 0.88 # 20244 # 21497 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.431 1_124 - 468 DAO PF01266.19 358 2.2e-18 60.1 0.1 1 1 1.3e-18 2.7e-16 53.2 0.1 1 202 3 183 3 193 0.84 # 109417 # 110820 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.588 1_113 - 194 LptE PF04390.7 155 7.4e-05 16.4 0.0 1 1 6.3e-07 0.00013 15.6 0.0 1 79 7 87 7 124 0.81 # 100657 # 101238 # -1 # ID=1_113;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.471 1_28 - 894 AAA_10 PF12846.2 304 1.7e-67 221.9 0.1 1 1 3.8e-69 2.6e-67 221.3 0.1 1 304 456 813 456 813 0.95 # 30295 # 32976 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.419 1_108 - 695 AAA_10 PF12846.2 304 1.4e-17 57.9 0.0 1 1 5.2e-19 3.6e-17 56.6 0.0 2 300 199 582 198 586 0.82 # 93267 # 95351 # -1 # ID=1_108;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.452 3_27 - 595 AAA_10 PF12846.2 304 0.00057 13.3 0.0 1 1 2.3e-05 0.0016 11.8 0.0 1 22 16 37 16 47 0.84 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 4_5 - 208 HTH_20 PF12840.2 61 3.1e-11 36.9 0.3 1 1 7.6e-13 7.8e-11 35.6 0.0 11 61 5 55 1 55 0.94 # 3176 # 3799 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.413 4_4 - 208 HTH_20 PF12840.2 61 0.0012 12.6 0.0 1 1 2.7e-05 0.0028 11.4 0.0 21 46 21 46 12 61 0.84 # 2575 # 3198 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.402 2_24 - 1205 ATP-grasp_5 PF13549.1 222 0.00011 15.3 0.0 1 1 1.1e-06 0.00023 14.3 0.0 12 53 116 158 111 164 0.89 # 18953 # 22567 # -1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.596 1_131 - 74 Dimerisation PF08100.6 51 0.00019 15.2 0.5 1 1 2.8e-06 0.00029 14.6 0.1 15 47 28 65 26 66 0.81 # 115898 # 116119 # 1 # ID=1_131;partial=01;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.437 2_1 - 74 Dimerisation PF08100.6 51 0.00019 15.2 0.5 1 1 2.8e-06 0.00029 14.6 0.1 15 47 28 65 26 66 0.81 # 2 # 223 # -1 # ID=2_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.437 1_42 - 236 DnaJ_CXXCXGXG PF00684.14 66 1.5e-05 18.9 1.3 1 1 2.4e-07 2.5e-05 18.2 1.3 36 66 28 57 21 57 0.86 # 44011 # 44718 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.421 1_64 - 156 DnaJ_CXXCXGXG PF00684.14 66 8.9e-05 16.5 5.9 1 1 3.3e-06 0.00034 14.6 5.9 16 52 33 60 8 72 0.57 # 65416 # 65883 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.472 3_27 - 595 UvrD_C PF13361.1 351 4.6e-42 138.6 0.0 1 2 0.056 12 -0.9 0.0 216 294 10 84 3 85 0.74 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 3_27 - 595 UvrD_C PF13361.1 351 4.6e-42 138.6 0.0 2 2 8.7e-44 1.8e-41 136.6 0.0 2 348 254 564 253 567 0.89 # 22378 # 24162 # -1 # ID=3_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.442 2_19 - 264 AAA_13 PF13166.1 712 0.00084 11.7 0.0 1 1 1e-05 0.0011 11.4 0.0 23 105 55 152 46 170 0.64 # 13377 # 14168 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.514 2_8 - 407 AAA_13 PF13166.1 712 0.066 5.5 36.8 1 2 2.2e-05 0.0022 10.3 27.3 291 493 107 313 81 324 0.73 # 5414 # 6634 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.474 2_8 - 407 AAA_13 PF13166.1 712 0.066 5.5 36.8 2 2 0.041 4.2 -0.5 2.9 406 453 339 383 315 391 0.55 # 5414 # 6634 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.474 1_20 - 418 ArsA_ATPase PF02374.10 305 1.9e-06 21.0 0.7 1 2 0.026 5.4 -0.2 0.0 214 274 14 76 6 84 0.76 # 20244 # 21497 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.431 1_20 - 418 ArsA_ATPase PF02374.10 305 1.9e-06 21.0 0.7 2 2 3.9e-07 8e-05 15.7 0.2 7 136 121 269 115 274 0.63 # 20244 # 21497 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.431 1_20 - 418 AAA_31 PF13614.1 157 2.3e-06 21.5 0.3 1 2 5.5e-06 0.0011 12.8 0.0 9 128 123 270 121 294 0.81 # 20244 # 21497 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.431 1_20 - 418 AAA_31 PF13614.1 157 2.3e-06 21.5 0.3 2 2 0.00093 0.19 5.6 0.1 14 116 299 408 284 411 0.85 # 20244 # 21497 # -1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.431 3_25 - 126 SSB PF00436.20 104 0.0003 14.6 0.1 1 2 8.1e-06 0.0017 12.2 0.1 2 84 8 88 7 94 0.79 # 20669 # 21046 # -1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.373 3_25 - 126 SSB PF00436.20 104 0.0003 14.6 0.1 2 2 0.027 5.6 0.9 0.0 42 60 91 109 85 112 0.83 # 20669 # 21046 # -1 # ID=3_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.373 1_47 - 559 MetW PF07021.7 193 4.4e-05 16.8 0.0 1 1 4.2e-07 8.7e-05 15.9 0.0 7 90 412 495 409 506 0.84 # 48442 # 50118 # 1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.506 1_124 - 468 Lycopene_cycl PF05834.7 374 1.7e-05 17.8 0.0 1 2 5.6e-07 0.00011 15.0 0.0 1 41 3 41 3 77 0.89 # 109417 # 110820 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.588 1_124 - 468 Lycopene_cycl PF05834.7 374 1.7e-05 17.8 0.0 2 2 0.018 3.6 0.2 0.0 102 143 144 186 132 198 0.82 # 109417 # 110820 # -1 # ID=1_124;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.588 1_126 - 469 HTH_21 PF13276.1 60 0.00048 14.1 2.9 1 2 0.077 16 -0.4 0.6 24 48 26 49 26 65 0.80 # 112309 # 113715 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.510 1_126 - 469 HTH_21 PF13276.1 60 0.00048 14.1 2.9 2 2 6.1e-06 0.0012 12.8 0.0 29 59 99 129 78 130 0.82 # 112309 # 113715 # 1 # ID=1_126;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.510 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/4d227634-4b3b-4365-9b99-6ddb468b09a8 # Target file: checkm_output/bins/pn97/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pn97/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/4d227634-4b3b-4365-9b99-6ddb468b09a8 checkm_output/bins/pn97/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:24:22 2017 # [ok]