# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_64 - 455 KaiC PF06745.8 227 1.4e-06 20.7 0.0 1 1 2.9e-08 3.5e-06 19.4 0.0 4 66 185 253 183 277 0.87 # 64521 # 65885 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.481 1_26 - 191 TIGR01173 TIGR01173 452 5.3e-07 21.6 0.9 1 1 7.3e-09 8.6e-07 20.9 0.6 390 438 134 183 90 188 0.85 # 26282 # 26854 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.351 1_10 - 2256 N6_Mtase PF02384.11 311 3.1e-10 32.7 0.0 1 1 3.3e-11 3.8e-09 29.1 0.0 93 249 145 291 73 296 0.76 # 5780 # 12547 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 4_2 - 296 rve_3 PF13683.1 67 1.9e-13 42.9 0.0 1 1 3.6e-15 4.2e-13 41.8 0.0 6 67 216 277 211 277 0.92 # 382 # 1269 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 1_64 - 455 FtsK_SpoIIIE PF01580.13 205 0.00037 13.1 0.2 1 2 8.6e-05 0.01 8.4 0.0 40 66 208 234 184 242 0.82 # 64521 # 65885 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.481 1_64 - 455 FtsK_SpoIIIE PF01580.13 205 0.00037 13.1 0.2 2 2 0.012 1.4 1.4 0.1 71 124 319 366 313 400 0.74 # 64521 # 65885 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.481 1_10 - 2256 Helicase_C PF00271.26 78 7.7e-09 28.5 0.0 1 1 1.6e-10 1.9e-08 27.2 0.0 16 78 1454 1517 1435 1517 0.86 # 5780 # 12547 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 1_50 - 334 HTH_38 PF13936.1 44 8.5e-05 15.3 0.3 1 2 0.052 6.2 -0.3 0.0 19 30 147 158 130 160 0.75 # 50094 # 51095 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.443 1_50 - 334 HTH_38 PF13936.1 44 8.5e-05 15.3 0.3 2 2 3.6e-06 0.00043 13.0 0.3 12 34 157 179 151 187 0.86 # 50094 # 51095 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.443 1_63 - 276 TIGR01932 TIGR01932 318 5.6e-08 24.7 2.5 1 1 6.8e-10 8e-08 24.2 2.5 145 268 115 239 97 243 0.84 # 63310 # 64137 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.473 1_63 - 276 TIGR01933 TIGR01933 261 2.4e-07 23.2 0.9 1 1 2.5e-09 3e-07 22.9 0.9 76 201 105 233 52 243 0.73 # 63310 # 64137 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.473 1_50 - 334 MarR PF01047.17 59 0.00069 12.5 0.0 1 1 1.5e-05 0.0017 11.2 0.0 15 38 163 186 157 188 0.92 # 50094 # 51095 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.443 1_64 - 455 AAA_19 PF13245.1 76 0.001 12.0 0.0 1 1 2.5e-05 0.0029 10.5 0.0 10 48 206 241 199 264 0.82 # 64521 # 65885 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.481 1_51 - 399 CbiA PF01656.18 195 1.2e-20 66.8 0.0 1 1 1.8e-22 2.2e-20 66.0 0.0 1 144 111 294 111 322 0.75 # 51112 # 52308 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 1_60 - 1014 MethyltransfD12 PF02086.10 260 3.3e-56 183.7 0.0 1 1 4.2e-58 4.9e-56 183.1 0.0 1 245 752 981 752 994 0.94 # 58259 # 61300 # 1 # ID=1_60;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.469 1_50 - 334 Sigma70_r4_2 PF08281.7 54 0.00022 13.9 0.1 1 1 5e-06 0.00059 12.5 0.1 25 50 164 189 158 191 0.91 # 50094 # 51095 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.443 1_54 - 295 Rep_3 PF01051.16 222 2.3e-20 66.2 0.3 1 1 2.5e-22 3e-20 65.9 0.3 6 215 26 285 22 290 0.89 # 53579 # 54463 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.452 4_2 - 296 rve PF00665.21 120 4.3e-28 91.0 0.1 1 1 9.5e-30 1.1e-27 89.7 0.0 2 119 125 239 124 240 0.97 # 382 # 1269 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 1_65 - 333 Glyco_trans_1_2 PF13524.1 92 0.00013 15.4 0.0 1 1 4.4e-06 0.00052 13.5 0.0 6 66 245 306 230 322 0.72 # 65885 # 66883 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_10 - 2256 Methyltransf_26 PF13659.1 117 3e-09 30.1 1.9 1 1 2.9e-10 1.7e-08 27.7 0.0 5 116 116 225 113 226 0.79 # 5780 # 12547 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 1_60 - 1014 Methyltransf_26 PF13659.1 117 1.9e-05 17.8 0.0 1 1 7.9e-07 4.7e-05 16.6 0.0 1 83 770 929 770 979 0.69 # 58259 # 61300 # 1 # ID=1_60;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.469 2_2 - 495 AAA_30 PF13604.1 196 3.3e-05 16.6 0.0 1 1 2.4e-06 0.00028 13.6 0.0 5 127 37 189 35 194 0.73 # 564 # 2048 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.479 1_76 - 226 TIGR00668 TIGR00668 279 1.8e-16 53.2 0.2 1 2 5e-17 5.9e-15 48.2 0.1 4 73 19 86 16 155 0.82 # 74001 # 74678 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.479 1_76 - 226 TIGR00668 TIGR00668 279 1.8e-16 53.2 0.2 2 2 0.003 0.35 3.0 0.0 217 257 179 218 171 222 0.74 # 74001 # 74678 # 1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.479 4_1 - 109 HTH_Tnp_1 PF01527.15 76 5e-13 42.0 1.3 1 1 5.1e-14 2e-12 40.1 1.3 1 74 1 87 1 88 0.86 # 56 # 382 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_78 - 24 HTH_Tnp_1 PF01527.15 76 9.3e-06 18.7 0.1 1 1 2.4e-07 9.3e-06 18.7 0.1 1 22 1 22 1 24 0.92 # 74934 # 75005 # 1 # ID=1_78;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.472 3_4 - 24 HTH_Tnp_1 PF01527.15 76 9.3e-06 18.7 0.1 1 1 2.4e-07 9.3e-06 18.7 0.1 1 22 1 22 1 24 0.92 # 2767 # 2838 # 1 # ID=3_4;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.472 1_51 - 399 MipZ PF09140.6 261 7.2e-09 28.2 0.1 1 2 4.6e-05 0.0054 8.9 0.0 1 51 109 164 109 187 0.77 # 51112 # 52308 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 1_51 - 399 MipZ PF09140.6 261 7.2e-09 28.2 0.1 2 2 1.4e-07 1.7e-05 17.2 0.0 82 135 228 281 213 289 0.86 # 51112 # 52308 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 1_60 - 1014 UPF0020 PF01170.13 180 0.00022 14.0 0.0 1 2 0.0042 0.49 3.0 0.0 28 50 769 791 766 829 0.87 # 58259 # 61300 # 1 # ID=1_60;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.469 1_60 - 1014 UPF0020 PF01170.13 180 0.00022 14.0 0.0 2 2 0.00011 0.013 8.2 0.0 86 116 896 926 891 932 0.91 # 58259 # 61300 # 1 # ID=1_60;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.469 1_21 - 640 DivIC PF04977.10 80 0.0035 10.0 13.1 1 2 0.016 1.9 1.3 4.1 17 56 205 244 196 250 0.62 # 22247 # 24166 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 1_21 - 640 DivIC PF04977.10 80 0.0035 10.0 13.1 2 2 4.9e-06 0.00058 12.5 2.2 20 55 250 287 246 290 0.85 # 22247 # 24166 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 1_50 - 334 Trp_repressor PF01371.14 88 0.00031 13.8 0.7 1 1 7.4e-06 0.00087 12.4 0.1 40 69 157 185 124 194 0.84 # 50094 # 51095 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.443 1_50 - 334 KorB PF08535.5 93 4.8e-05 16.7 0.0 1 1 3.8e-06 0.00045 13.6 0.0 2 38 164 200 163 213 0.91 # 50094 # 51095 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.443 1_10 - 2256 Eco57I PF07669.6 106 4.7e-05 16.9 0.0 1 1 1.6e-06 0.00019 14.9 0.0 3 101 174 271 172 276 0.87 # 5780 # 12547 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 4_2 - 296 rve_2 PF13333.1 52 2.3e-08 27.2 0.0 1 1 4e-10 4.7e-08 26.2 0.0 1 44 230 276 230 283 0.88 # 382 # 1269 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 1_65 - 333 Glyco_trans_1_4 PF13692.1 135 8.9e-07 22.3 0.1 1 2 0.021 2.4 1.4 0.0 84 133 22 70 9 72 0.73 # 65885 # 66883 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_65 - 333 Glyco_trans_1_4 PF13692.1 135 8.9e-07 22.3 0.1 2 2 1.2e-07 1.5e-05 18.4 0.0 54 105 216 271 193 318 0.76 # 65885 # 66883 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 1_42 - 270 HTH_AraC PF00165.18 42 0.00014 14.8 0.0 1 1 3.8e-06 0.00045 13.2 0.0 14 37 50 73 50 76 0.91 # 42991 # 43800 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.454 1_30 - 279 HI0933_like PF03486.9 409 0.0012 10.4 0.0 1 1 1.5e-05 0.0018 9.9 0.0 60 124 27 90 19 109 0.80 # 30850 # 31686 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.459 2_3 - 398 HTH_23 PF13384.1 50 1.3e-06 21.1 4.2 1 2 1.3e-07 4.9e-06 19.3 0.0 10 44 10 45 3 51 0.88 # 2048 # 3241 # -1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_3 - 398 HTH_23 PF13384.1 50 1.3e-06 21.1 4.2 2 2 0.044 1.7 1.6 0.1 32 45 232 245 231 250 0.82 # 2048 # 3241 # -1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 4_1 - 109 HTH_23 PF13384.1 50 9.1e-05 15.3 0.4 1 1 6.5e-06 0.00026 13.8 0.2 5 42 10 55 8 69 0.84 # 56 # 382 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_50 - 334 HTH_23 PF13384.1 50 0.00025 13.9 0.1 1 1 2.2e-05 0.00085 12.2 0.0 9 45 157 191 156 196 0.84 # 50094 # 51095 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.443 2_24 - 120 Ribosomal_S27e PF01667.12 55 0.00014 14.6 0.0 1 1 1.9e-06 0.00022 13.9 0.0 11 39 36 63 34 73 0.85 # 11566 # 11925 # -1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 2_3 - 398 HTH_29 PF13551.1 112 7.3e-07 22.5 0.2 1 2 7.6e-08 9e-06 19.0 0.0 5 91 11 84 7 102 0.73 # 2048 # 3241 # -1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_3 - 398 HTH_29 PF13551.1 112 7.3e-07 22.5 0.2 2 2 0.07 8.3 -0.2 0.0 34 87 239 279 212 290 0.52 # 2048 # 3241 # -1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_10 - 2256 SNF2_N PF00176.18 299 2.5e-18 59.0 0.0 1 1 5.1e-20 6e-18 57.7 0.0 27 293 849 1262 835 1268 0.86 # 5780 # 12547 # -1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 1_51 - 399 TIGR01968 TIGR01968 261 1.3e-06 20.7 0.0 1 2 0.00036 0.042 6.0 0.0 3 28 110 135 108 153 0.78 # 51112 # 52308 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 1_51 - 399 TIGR01968 TIGR01968 261 1.3e-06 20.7 0.0 2 2 5.7e-06 0.00067 11.8 0.0 102 135 235 268 225 280 0.88 # 51112 # 52308 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 1_62 - 79 TIGR02209 TIGR02209 85 0.00052 12.8 0.1 1 2 0.042 5 0.0 1.8 4 21 15 32 13 39 0.75 # 63093 # 63329 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.392 1_62 - 79 TIGR02209 TIGR02209 85 0.00052 12.8 0.1 2 2 4.4e-06 0.00052 12.8 0.1 3 33 45 75 43 76 0.89 # 63093 # 63329 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.392 1_65 - 333 Glycos_transf_1 PF00534.15 172 1.1e-07 24.6 0.0 1 1 1.5e-09 1.7e-07 23.9 0.0 85 159 231 304 226 318 0.83 # 65885 # 66883 # 1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494 2_3 - 398 HTH_28 PF13518.1 52 8.1e-09 28.6 0.3 1 2 6e-09 7.1e-07 22.4 0.0 2 41 7 47 6 60 0.84 # 2048 # 3241 # -1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_3 - 398 HTH_28 PF13518.1 52 8.1e-09 28.6 0.3 2 2 0.0083 0.97 2.7 0.0 27 45 232 250 229 254 0.87 # 2048 # 3241 # -1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_64 - 455 DnaB_C PF03796.10 259 1.6e-109 357.8 0.3 1 1 2e-111 2.4e-109 357.3 0.3 1 257 188 445 188 447 0.98 # 64521 # 65885 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.481 1_62 - 79 FtsL PF04999.8 97 0.00011 15.1 2.6 1 2 0.041 4.8 0.2 0.7 14 32 14 32 6 37 0.72 # 63093 # 63329 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.392 1_62 - 79 FtsL PF04999.8 97 0.00011 15.1 2.6 2 2 9.9e-07 0.00012 15.0 0.1 12 44 40 75 33 77 0.76 # 63093 # 63329 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.392 1_50 - 334 HTH_24 PF13412.1 48 1.6e-07 23.8 0.5 1 2 4.3e-08 2.5e-06 20.0 0.0 14 39 162 187 158 190 0.93 # 50094 # 51095 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.443 1_50 - 334 HTH_24 PF13412.1 48 1.6e-07 23.8 0.5 2 2 0.035 2.1 1.1 0.1 2 17 250 265 249 268 0.83 # 50094 # 51095 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.443 2_3 - 398 HTH_24 PF13412.1 48 3.3e-05 16.4 0.0 1 1 1.6e-06 9.7e-05 14.9 0.0 12 44 13 45 11 45 0.94 # 2048 # 3241 # -1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_21 - 640 Kinesin-relat_1 PF12711.2 86 0.0022 11.5 4.6 1 2 0.004 0.48 4.1 0.5 8 42 196 230 191 236 0.81 # 22247 # 24166 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 1_21 - 640 Kinesin-relat_1 PF12711.2 86 0.0022 11.5 4.6 2 2 0.00024 0.029 8.0 0.3 7 37 251 281 246 284 0.90 # 22247 # 24166 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 2_2 - 495 Terminase_6 PF03237.10 384 1.5e-06 20.3 0.1 1 1 2.7e-08 3.2e-06 19.2 0.1 6 317 58 380 55 427 0.75 # 564 # 2048 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.479 2_18 - 94 ASCH PF04266.9 105 7.9e-07 22.6 0.1 1 1 7.7e-09 9.1e-07 22.4 0.1 1 30 6 39 6 91 0.69 # 9466 # 9747 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_64 - 455 AAA_25 PF13481.1 194 9.4e-15 47.6 0.1 1 1 1.5e-16 1.8e-14 46.7 0.1 14 190 188 368 174 372 0.82 # 64521 # 65885 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.481 1_64 - 455 AAA_33 PF13671.1 143 0.00023 14.2 0.2 1 3 0.088 10 -0.9 0.0 46 79 134 172 102 181 0.69 # 64521 # 65885 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.481 1_64 - 455 AAA_33 PF13671.1 143 0.00023 14.2 0.2 2 3 3.9e-05 0.0047 10.0 0.0 2 42 209 248 208 327 0.60 # 64521 # 65885 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.481 1_64 - 455 AAA_33 PF13671.1 143 0.00023 14.2 0.2 3 3 0.036 4.2 0.4 0.1 88 123 350 383 331 394 0.72 # 64521 # 65885 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.481 1_60 - 1014 DNA_methylase PF00145.12 335 1.2e-32 106.4 0.0 1 5 3.2e-10 3.8e-08 25.9 0.0 5 71 8 78 6 81 0.94 # 58259 # 61300 # 1 # ID=1_60;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.469 1_60 - 1014 DNA_methylase PF00145.12 335 1.2e-32 106.4 0.0 2 5 1.9e-10 2.2e-08 26.6 0.0 71 119 419 476 415 486 0.90 # 58259 # 61300 # 1 # ID=1_60;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.469 1_60 - 1014 DNA_methylase PF00145.12 335 1.2e-32 106.4 0.0 3 5 1.1e-08 1.3e-06 20.8 0.2 136 161 533 558 528 583 0.86 # 58259 # 61300 # 1 # ID=1_60;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.469 1_60 - 1014 DNA_methylase PF00145.12 335 1.2e-32 106.4 0.0 4 5 7.3e-09 8.7e-07 21.4 0.0 266 310 623 667 574 674 0.64 # 58259 # 61300 # 1 # ID=1_60;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.469 1_60 - 1014 DNA_methylase PF00145.12 335 1.2e-32 106.4 0.0 5 5 0.0014 0.16 4.1 0.0 312 334 700 722 689 723 0.88 # 58259 # 61300 # 1 # ID=1_60;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.469 1_33 - 1131 UBA_4 PF14555.1 43 0.00019 14.1 0.1 1 1 1.1e-05 0.0013 11.4 0.0 20 36 820 836 819 841 0.93 # 33472 # 36864 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.484 4_2 - 296 DDE_Tnp_IS240 PF13610.1 140 5.8e-08 26.0 0.0 1 1 7.3e-10 8.6e-08 25.4 0.0 2 137 130 267 129 269 0.92 # 382 # 1269 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 2_24 - 120 TF_Zn_Ribbon PF08271.7 43 7.3e-07 21.6 0.0 1 1 9.4e-09 1.1e-06 21.1 0.0 4 41 36 73 36 75 0.88 # 11566 # 11925 # -1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.428 1_14 - 163 tRNA_anti-codon PF01336.20 75 0.00074 12.5 0.0 1 1 1e-05 0.0012 11.9 0.0 31 61 58 92 53 112 0.82 # 16363 # 16851 # 1 # ID=1_14;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.499 1_42 - 270 MarR_2 PF12802.2 62 0.00042 13.2 0.2 1 1 2.5e-05 0.0015 11.4 0.1 27 61 50 84 45 89 0.83 # 42991 # 43800 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.454 1_50 - 334 MarR_2 PF12802.2 62 0.00057 12.7 0.0 1 1 2.3e-05 0.0014 11.5 0.0 17 47 163 191 156 202 0.86 # 50094 # 51095 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.443 1_42 - 270 HTH_Crp_2 PF13545.1 76 0.00091 12.2 0.0 1 1 1.6e-05 0.0019 11.2 0.0 21 60 37 76 21 88 0.81 # 42991 # 43800 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.454 1_2 - 132 Methyltransf_21 PF05050.7 167 0.0004 13.5 0.0 1 1 3.4e-06 0.0004 13.5 0.0 112 161 62 115 4 125 0.72 # 429 # 824 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.402 1_21 - 640 AAA_13 PF13166.1 712 0.011 7.3 9.9 1 2 1.1e-05 0.0014 10.3 5.4 378 465 199 281 158 284 0.62 # 22247 # 24166 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 1_21 - 640 AAA_13 PF13166.1 712 0.011 7.3 9.9 2 2 0.056 6.6 -1.9 0.1 369 398 564 593 528 634 0.49 # 22247 # 24166 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.522 1_51 - 399 ArsA_ATPase PF02374.10 305 0.00052 12.2 0.0 1 1 1.2e-05 0.0014 10.8 0.0 4 52 111 166 108 255 0.74 # 51112 # 52308 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 1_51 - 399 AAA_31 PF13614.1 157 6.3e-07 22.6 0.0 1 2 0.0009 0.053 6.6 0.0 2 63 110 176 109 222 0.75 # 51112 # 52308 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 1_51 - 399 AAA_31 PF13614.1 157 6.3e-07 22.6 0.0 2 2 6e-06 0.00035 13.7 0.0 108 138 235 265 231 277 0.85 # 51112 # 52308 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.456 1_64 - 455 AAA_31 PF13614.1 157 7.3e-05 15.9 0.0 1 1 2.9e-06 0.00017 14.7 0.0 5 43 210 249 208 260 0.89 # 64521 # 65885 # 1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.481 1_14 - 163 SSB PF00436.20 104 4.2e-43 138.7 0.3 1 1 4.6e-45 5.5e-43 138.3 0.3 1 100 6 109 6 113 0.96 # 16363 # 16851 # 1 # ID=1_14;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.499 4_2 - 296 HTH_21 PF13276.1 60 1.4e-18 59.9 2.9 1 1 2.8e-20 3.3e-18 58.7 2.9 3 60 47 103 44 103 0.93 # 382 # 1269 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.541 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/0573c8e4-14b8-49ce-a186-6dfbf2ea61a2 # Target file: checkm_output/bins/pn83/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pn83/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/0573c8e4-14b8-49ce-a186-6dfbf2ea61a2 checkm_output/bins/pn83/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:24:05 2017 # [ok]