# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_27 - 475 KaiC PF06745.8 227 9.3e-05 13.8 0.0 1 2 0.00019 0.011 6.9 0.0 25 60 14 48 10 111 0.82 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 KaiC PF06745.8 227 9.3e-05 13.8 0.0 2 2 0.0011 0.067 4.4 0.0 21 48 329 355 320 451 0.83 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 ABC_tran PF00005.22 137 1.1e-05 18.0 0.0 1 2 0.0086 0.26 3.8 0.0 15 111 12 111 9 119 0.70 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 ABC_tran PF00005.22 137 1.1e-05 18.0 0.0 2 2 5.8e-05 0.0017 10.8 0.0 13 45 329 361 322 434 0.77 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_23 - 184 ABC_tran PF00005.22 137 3.2e-05 16.4 0.2 1 1 1.6e-06 4.8e-05 15.9 0.2 11 37 45 71 38 176 0.85 # 21078 # 21629 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.562 1_27 - 475 MobB PF03205.9 140 1.1e-07 23.8 0.0 1 2 1.1e-05 0.00066 11.6 0.0 3 63 11 74 9 91 0.72 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 MobB PF03205.9 140 1.1e-07 23.8 0.0 2 2 3.3e-05 0.002 10.0 0.0 3 49 330 376 328 417 0.79 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_19 PF13245.1 76 7.7e-10 30.7 2.7 1 2 1.3e-06 7.6e-05 14.7 0.0 16 50 14 44 6 49 0.89 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_19 PF13245.1 76 7.7e-10 30.7 2.7 2 2 1.4e-06 8.5e-05 14.5 0.0 4 36 320 353 318 416 0.84 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 CbiA PF01656.18 195 1.8e-27 88.2 0.1 1 2 4.5e-16 1.3e-14 46.2 0.0 4 163 13 242 10 271 0.71 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 CbiA PF01656.18 195 1.8e-27 88.2 0.1 2 2 3.6e-14 1.1e-12 40.0 0.0 4 109 332 455 329 464 0.67 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_7 - 196 CbiA PF01656.18 195 1.4e-17 55.9 0.4 1 1 7.3e-19 2.2e-17 55.3 0.4 19 142 12 112 8 163 0.72 # 4062 # 4649 # -1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.437 1_23 - 184 PRK PF00485.13 194 0.00046 11.9 0.0 1 1 9.2e-06 0.00055 11.7 0.0 1 32 47 77 47 131 0.83 # 21078 # 21629 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.562 1_27 - 475 KTI12 PF08433.5 270 9.5e-05 13.8 0.0 1 2 0.0035 0.21 2.9 0.0 4 38 11 45 9 57 0.89 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 KTI12 PF08433.5 270 9.5e-05 13.8 0.0 2 2 6.5e-05 0.0039 8.5 0.0 3 38 329 364 328 399 0.86 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 YhjQ PF06564.7 244 8e-09 27.3 0.1 1 2 7.6e-07 4.6e-05 15.0 0.0 10 44 16 50 11 129 0.93 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 YhjQ PF06564.7 244 8e-09 27.3 0.1 2 2 2.6e-05 0.0015 10.0 0.0 10 52 335 377 328 456 0.85 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_23 PF13476.1 202 0.0003 13.3 0.0 1 2 0.042 1.3 1.5 0.1 24 37 13 26 8 38 0.81 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_23 PF13476.1 202 0.0003 13.3 0.0 2 2 0.00016 0.0049 9.4 0.0 18 41 326 349 308 435 0.81 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_52 - 462 AAA_23 PF13476.1 202 0.0041 9.6 4.4 1 2 0.00068 0.02 7.3 1.3 106 198 122 233 65 244 0.68 # 46360 # 47745 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.503 1_52 - 462 AAA_23 PF13476.1 202 0.0041 9.6 4.4 2 2 0.011 0.33 3.4 0.1 144 191 349 403 303 437 0.61 # 46360 # 47745 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.503 1_7 - 196 AAA_24 PF13479.1 213 3.4e-05 15.6 0.2 1 1 1.6e-06 4.7e-05 15.2 0.2 24 88 20 84 13 88 0.82 # 4062 # 4649 # -1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.437 1_27 - 475 AAA_24 PF13479.1 213 0.00033 12.4 2.7 1 2 0.0052 0.16 3.7 0.3 10 76 15 143 11 146 0.45 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_24 PF13479.1 213 0.00033 12.4 2.7 2 2 0.00051 0.015 7.0 0.1 6 22 330 346 327 353 0.87 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 TIGR00416 TIGR00416 454 3.1e-05 14.7 0.0 1 2 1.3e-05 0.00077 10.1 0.0 99 188 13 102 9 120 0.89 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 TIGR00416 TIGR00416 454 3.1e-05 14.7 0.0 2 2 0.0029 0.18 2.3 0.0 95 121 328 354 321 369 0.86 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_30 PF13604.1 196 2.1e-07 22.9 0.1 1 2 0.00046 0.027 6.2 0.0 22 54 12 44 3 71 0.86 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_30 PF13604.1 196 2.1e-07 22.9 0.1 2 2 2e-06 0.00012 13.9 0.1 10 54 319 363 316 404 0.88 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 MipZ PF09140.6 261 1.1e-08 26.7 2.0 1 2 3.2e-05 0.00096 10.4 0.0 8 39 15 46 10 81 0.90 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 MipZ PF09140.6 261 1.1e-08 26.7 2.0 2 2 9e-06 0.00027 12.2 0.7 6 50 332 379 327 464 0.56 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_7 - 196 MipZ PF09140.6 261 1.4e-06 19.7 1.0 1 1 4.8e-07 1.4e-05 16.4 1.1 87 141 54 107 2 120 0.75 # 4062 # 4649 # -1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.437 1_27 - 475 AAA PF00004.24 132 2.5e-06 19.9 0.1 1 2 0.0031 0.19 4.1 0.0 2 22 12 32 11 68 0.78 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA PF00004.24 132 2.5e-06 19.9 0.1 2 2 4.5e-06 0.00027 13.3 0.0 1 22 330 351 330 412 0.76 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_25 - 117 HTH_27 PF13463.1 68 0.00043 12.8 0.0 1 1 1.1e-05 0.00066 12.2 0.0 25 66 36 74 21 75 0.86 # 23055 # 23405 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.538 1_27 - 475 TIGR00064 TIGR00064 279 9.9e-08 23.3 0.1 1 2 7.6e-05 0.0046 8.1 0.0 82 116 11 45 3 56 0.89 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 TIGR00064 TIGR00064 279 9.9e-08 23.3 0.1 2 2 2.8e-06 0.00017 12.7 0.0 78 116 326 364 305 391 0.88 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_23 - 184 cobW PF02492.14 178 0.00016 13.3 0.1 1 1 4.3e-06 0.00026 12.6 0.1 2 26 47 71 46 80 0.78 # 21078 # 21629 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.562 1_27 - 475 AAA_16 PF13191.1 185 1.1e-09 30.8 1.7 1 2 2.1e-06 6.3e-05 15.2 0.3 23 135 7 90 3 268 0.81 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_16 PF13191.1 185 1.1e-09 30.8 1.7 2 2 8.5e-06 0.00025 13.2 0.0 16 88 319 390 314 460 0.59 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_23 - 184 AAA_16 PF13191.1 185 1.1e-05 17.6 0.1 1 1 4.8e-07 1.4e-05 17.3 0.1 24 106 45 126 27 182 0.59 # 21078 # 21629 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.562 1_27 - 475 AAA_22 PF13401.1 131 1.7e-05 17.2 0.2 1 2 0.0097 0.29 3.5 0.0 8 66 12 65 9 129 0.75 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_22 PF13401.1 131 1.7e-05 17.2 0.2 2 2 6.9e-05 0.0021 10.4 0.2 3 29 326 352 323 450 0.61 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_23 - 184 AAA_22 PF13401.1 131 0.00018 13.8 0.0 1 1 1.3e-05 0.0004 12.7 0.0 9 68 50 153 45 183 0.65 # 21078 # 21629 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.562 1_27 - 475 Thymidylate_kin PF02223.12 186 9.6e-08 23.8 0.2 1 2 3.5e-05 0.0021 9.6 0.0 3 47 15 59 13 74 0.87 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 Thymidylate_kin PF02223.12 186 9.6e-08 23.8 0.2 2 2 1.6e-05 0.00094 10.7 0.0 5 55 336 385 333 408 0.85 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_29 PF13555.1 62 1.3e-05 16.9 0.5 1 2 0.0021 0.12 4.1 0.0 27 42 12 27 5 40 0.83 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_29 PF13555.1 62 1.3e-05 16.9 0.5 2 2 2.6e-05 0.0016 10.2 0.2 23 45 328 349 317 355 0.82 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 adh_short_C2 PF13561.1 241 3.2e-05 15.9 0.0 1 2 6.4e-05 0.0038 9.1 0.0 1 45 18 59 17 128 0.65 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 adh_short_C2 PF13561.1 241 3.2e-05 15.9 0.0 2 2 0.0014 0.083 4.8 0.0 5 32 340 377 336 452 0.71 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 SRP54 PF00448.17 196 8.8e-11 33.8 1.1 1 2 4e-06 0.00024 12.8 0.0 3 38 10 45 8 56 0.92 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 SRP54 PF00448.17 196 8.8e-11 33.8 1.1 2 2 7.2e-08 4.3e-06 18.4 0.0 3 38 329 364 327 407 0.89 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 Fer4_NifH PF00142.13 273 4.3e-14 44.4 0.3 1 2 2.3e-09 1.4e-07 23.1 0.0 5 43 13 51 10 71 0.86 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 Fer4_NifH PF00142.13 273 4.3e-14 44.4 0.3 2 2 5.6e-08 3.3e-06 18.6 0.0 3 69 330 395 329 407 0.80 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 NB-ARC PF00931.17 287 2.1e-07 22.2 0.1 1 2 0.0014 0.086 3.8 0.0 22 36 11 25 5 35 0.87 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 NB-ARC PF00931.17 287 2.1e-07 22.2 0.1 2 2 2.7e-07 1.6e-05 16.0 0.0 17 52 325 359 315 404 0.74 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 Mg_chelatase PF01078.16 207 0.00016 13.0 0.1 1 2 0.038 2.3 -0.5 0.0 25 50 11 36 10 66 0.72 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 Mg_chelatase PF01078.16 207 0.00016 13.0 0.1 2 2 2.5e-05 0.0015 9.9 0.1 22 58 326 363 319 391 0.79 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 CobA_CobO_BtuR PF02572.10 172 0.00012 13.9 3.9 1 3 0.002 0.12 4.2 0.0 9 37 13 42 8 43 0.86 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 CobA_CobO_BtuR PF02572.10 172 0.00012 13.9 3.9 2 3 0.019 1.1 1.0 0.0 125 156 194 225 184 231 0.86 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 CobA_CobO_BtuR PF02572.10 172 0.00012 13.9 3.9 3 3 0.00025 0.015 7.1 0.6 2 36 326 360 325 362 0.90 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 Arch_ATPase PF01637.13 234 0.0001 14.3 0.0 1 2 0.0054 0.32 2.8 0.0 23 144 11 136 4 152 0.60 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 Arch_ATPase PF01637.13 234 0.0001 14.3 0.0 2 2 7e-05 0.0042 8.9 0.0 15 88 322 408 314 457 0.54 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 PhoH PF02562.11 205 4.8e-09 27.9 0.6 1 2 3.5e-06 0.00021 12.7 0.1 22 63 11 52 2 110 0.89 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 PhoH PF02562.11 205 4.8e-09 27.9 0.6 2 2 5.1e-06 0.0003 12.2 0.0 15 45 321 353 309 376 0.82 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_5 PF07728.9 139 6.6e-05 14.9 0.0 1 2 0.0068 0.41 2.6 0.0 2 31 11 43 10 151 0.84 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_5 PF07728.9 139 6.6e-05 14.9 0.0 2 2 3.6e-05 0.0022 9.9 0.0 2 45 330 373 329 432 0.76 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 TIGR00763 TIGR00763 795 0.0004 10.7 0.1 1 2 0.0019 0.11 2.6 0.0 356 375 11 30 5 40 0.81 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 TIGR00763 TIGR00763 795 0.0004 10.7 0.1 2 2 0.00019 0.012 5.9 0.0 354 377 328 351 317 360 0.82 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 ResIII PF04851.10 184 0.00012 14.2 0.0 1 2 0.0011 0.066 5.2 0.0 30 56 13 42 3 61 0.82 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 ResIII PF04851.10 184 0.00012 14.2 0.0 2 2 0.0004 0.024 6.6 0.0 23 50 325 352 252 395 0.84 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 TIGR01968 TIGR01968 261 9e-14 43.2 2.0 1 2 9.5e-09 2.9e-07 21.9 0.1 8 39 14 45 11 53 0.94 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 TIGR01968 TIGR01968 261 9e-14 43.2 2.0 2 2 2.8e-08 8.5e-07 20.4 0.2 5 38 330 363 326 368 0.87 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_7 - 196 TIGR01968 TIGR01968 261 6.3e-08 24.1 0.5 1 2 0.05 1.5 -0.1 0.0 20 39 10 28 2 37 0.81 # 4062 # 4649 # -1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.437 1_7 - 196 TIGR01968 TIGR01968 261 6.3e-08 24.1 0.5 2 2 7.1e-09 2.1e-07 22.3 0.1 99 217 53 171 30 187 0.74 # 4062 # 4649 # -1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.437 1_27 - 475 AAA_18 PF13238.1 129 6.5e-05 15.4 1.4 1 2 0.0083 0.25 3.9 0.0 2 19 12 29 11 58 0.77 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_18 PF13238.1 129 6.5e-05 15.4 1.4 2 2 0.00012 0.0037 9.8 0.1 1 24 330 358 330 448 0.78 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_23 - 184 AAA_18 PF13238.1 129 0.00023 13.7 0.0 1 1 1e-05 0.00031 13.3 0.0 1 22 48 69 48 116 0.85 # 21078 # 21629 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.562 1_27 - 475 DUF258 PF03193.11 161 2.8e-05 15.5 0.0 1 2 0.0032 0.097 4.0 0.0 38 52 11 25 2 125 0.88 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 DUF258 PF03193.11 161 2.8e-05 15.5 0.0 2 2 7.5e-05 0.0023 9.3 0.0 35 59 327 351 305 397 0.76 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_23 - 184 DUF258 PF03193.11 161 0.00055 11.3 0.0 1 1 2.8e-05 0.00084 10.7 0.0 30 63 41 73 17 82 0.74 # 21078 # 21629 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.562 1_27 - 475 TIGR00041 TIGR00041 196 4e-06 18.5 0.0 1 2 0.0012 0.037 5.6 0.0 6 53 10 57 8 71 0.85 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 TIGR00041 TIGR00041 196 4e-06 18.5 0.0 2 2 4.5e-05 0.0013 10.3 0.0 6 56 329 379 325 402 0.79 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_23 - 184 TIGR00041 TIGR00041 196 8.8e-05 14.1 0.1 1 1 6.6e-06 0.0002 13.0 0.0 7 32 48 73 43 83 0.87 # 21078 # 21629 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.562 1_23 - 184 DUF2791 PF10923.3 417 1e-05 16.4 0.0 1 2 7.3e-06 0.00044 11.1 0.0 25 82 28 78 22 96 0.73 # 21078 # 21629 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.562 1_23 - 184 DUF2791 PF10923.3 417 1e-05 16.4 0.0 2 2 0.0014 0.083 3.5 0.0 204 268 113 178 102 181 0.77 # 21078 # 21629 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.562 1_27 - 475 LpxK PF02606.9 326 0.00029 12.0 1.0 1 2 0.001 0.061 4.4 0.1 46 72 17 43 15 49 0.96 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 LpxK PF02606.9 326 0.00029 12.0 1.0 2 2 0.00031 0.019 6.1 0.1 46 69 336 359 333 363 0.92 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_23 - 184 MMR_HSR1 PF01926.18 116 0.00038 12.6 0.0 1 1 9.3e-06 0.00056 12.1 0.0 2 29 48 72 47 135 0.80 # 21078 # 21629 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.562 1_27 - 475 Miro PF08477.8 119 0.00081 12.1 0.8 1 3 0.023 1.4 1.7 0.2 5 15 14 24 11 32 0.88 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 Miro PF08477.8 119 0.00081 12.1 0.8 2 3 0.08 4.8 -0.1 0.0 78 104 201 227 179 235 0.72 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 Miro PF08477.8 119 0.00081 12.1 0.8 3 3 0.00071 0.043 6.6 0.0 2 21 330 349 329 407 0.73 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 T2SE PF00437.15 272 7.4e-05 13.9 0.0 1 2 0.0066 0.39 1.7 0.0 131 162 11 42 3 51 0.82 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 T2SE PF00437.15 272 7.4e-05 13.9 0.0 2 2 2.2e-05 0.0013 9.8 0.0 124 154 325 353 192 387 0.86 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_23 - 184 NACHT PF05729.7 166 7e-05 14.7 0.0 1 1 2.8e-06 8.3e-05 14.5 0.0 3 38 48 82 46 181 0.77 # 21078 # 21629 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.562 1_27 - 475 NACHT PF05729.7 166 0.001 10.9 6.8 1 2 0.019 0.58 2.0 0.1 3 26 11 34 10 42 0.79 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 NACHT PF05729.7 166 0.001 10.9 6.8 2 2 2.5e-05 0.00074 11.4 0.5 2 26 329 353 328 404 0.92 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_23 - 184 UPF0079 PF02367.12 123 0.00037 12.3 0.0 1 1 1.3e-05 0.00076 11.3 0.0 13 42 43 72 29 84 0.81 # 21078 # 21629 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.562 1_27 - 475 AAA_17 PF13207.1 121 7.9e-06 18.9 2.7 1 2 0.022 0.67 3.0 1.0 3 20 12 29 11 145 0.84 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_17 PF13207.1 121 7.9e-06 18.9 2.7 2 2 4.8e-06 0.00014 14.8 0.0 2 64 330 402 329 448 0.54 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_23 - 184 AAA_17 PF13207.1 121 0.00041 13.4 0.0 1 1 2.4e-05 0.00071 12.6 0.0 1 23 47 69 47 128 0.86 # 21078 # 21629 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.562 1_27 - 475 AAA_25 PF13481.1 194 8.8e-12 37.0 1.3 1 2 5.8e-06 0.00035 12.2 0.2 37 80 12 45 9 126 0.84 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_25 PF13481.1 194 8.8e-12 37.0 1.3 2 2 3.8e-09 2.3e-07 22.6 0.1 25 151 318 449 294 463 0.58 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 RuvB_N PF05496.7 234 1.9e-08 25.8 0.2 1 2 0.016 0.94 0.6 0.0 53 74 11 32 5 47 0.81 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 RuvB_N PF05496.7 234 1.9e-08 25.8 0.2 2 2 4.8e-09 2.9e-07 21.9 0.0 53 119 330 400 320 407 0.87 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_7 - 196 VirC1 PF07015.6 231 2.5e-08 25.4 0.2 1 1 1.5e-09 4.4e-08 24.6 0.2 20 123 10 104 1 164 0.77 # 4062 # 4649 # -1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.437 1_27 - 475 VirC1 PF07015.6 231 4.9e-05 14.6 0.3 1 2 0.00023 0.0069 7.6 0.0 9 42 15 48 10 73 0.86 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 VirC1 PF07015.6 231 4.9e-05 14.6 0.3 2 2 0.0017 0.051 4.8 0.1 10 43 335 368 329 379 0.87 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_33 PF13671.1 143 8.3e-05 14.7 0.4 1 2 0.043 2.6 0.1 0.0 3 31 12 45 11 95 0.67 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_33 PF13671.1 143 8.3e-05 14.7 0.4 2 2 1.5e-05 0.0009 11.3 0.2 1 43 329 379 329 467 0.71 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 ArgK PF03308.11 267 6e-08 23.9 0.3 1 2 3.5e-06 0.00011 13.2 0.1 34 71 13 50 9 63 0.93 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 ArgK PF03308.11 267 6e-08 23.9 0.3 2 2 0.00011 0.0032 8.4 0.0 32 71 330 369 315 394 0.86 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_23 - 184 ArgK PF03308.11 267 0.00025 12.0 0.2 1 1 1.9e-05 0.00058 10.8 0.0 29 58 45 74 27 139 0.69 # 21078 # 21629 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.562 1_27 - 475 RNA_helicase PF00910.17 107 0.00011 14.5 0.1 1 2 0.0094 0.57 2.6 0.0 2 23 12 33 11 53 0.79 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 RNA_helicase PF00910.17 107 0.00011 14.5 0.1 2 2 7e-05 0.0042 9.5 0.0 1 25 330 354 330 392 0.88 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 Gtr1_RagA PF04670.7 232 0.00012 13.4 0.2 1 3 0.013 0.79 0.9 0.1 2 16 11 25 10 30 0.88 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 Gtr1_RagA PF04670.7 232 0.00012 13.4 0.2 2 3 4.6e-05 0.0028 9.0 0.0 2 19 330 347 329 369 0.91 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 Gtr1_RagA PF04670.7 232 0.00012 13.4 0.2 3 3 0.093 5.6 -1.8 0.0 163 174 427 438 386 446 0.73 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 APS_kinase PF01583.15 157 6.9e-08 24.5 0.1 1 2 5.3e-06 0.00032 12.6 0.0 5 37 11 43 8 52 0.90 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 APS_kinase PF01583.15 157 6.9e-08 24.5 0.1 2 2 4.8e-05 0.0029 9.5 0.1 5 38 330 363 327 390 0.84 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 NTPase_1 PF03266.10 168 2.4e-06 19.5 2.0 1 3 0.00045 0.027 6.3 0.1 2 30 11 39 10 53 0.86 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 NTPase_1 PF03266.10 168 2.4e-06 19.5 2.0 2 3 0.03 1.8 0.4 0.0 107 159 179 229 174 238 0.66 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 NTPase_1 PF03266.10 168 2.4e-06 19.5 2.0 3 3 2.6e-05 0.0016 10.3 0.1 2 30 330 358 329 362 0.92 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_53 - 227 Trans_reg_C PF00486.23 77 1.1e-27 88.1 0.0 1 1 6.5e-29 2e-27 87.2 0.0 1 77 146 221 146 221 0.96 # 47935 # 48615 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.514 1_38 - 227 Trans_reg_C PF00486.23 77 9.4e-27 85.0 0.4 1 1 8.1e-28 2.4e-26 83.7 0.0 1 77 146 221 146 221 0.97 # 31958 # 32638 # -1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518 1_27 - 475 ATP_bind_1 PF03029.12 238 1.6e-05 16.7 2.7 1 2 0.00042 0.025 6.2 0.1 2 37 14 49 13 53 0.91 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 ATP_bind_1 PF03029.12 238 1.6e-05 16.7 2.7 2 2 3.9e-05 0.0023 9.6 0.1 2 37 333 368 332 371 0.94 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 PduV-EutP PF10662.4 143 0.002 9.8 1.9 1 2 0.065 3.9 -0.9 0.1 4 18 11 25 10 31 0.85 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 PduV-EutP PF10662.4 143 0.002 9.8 1.9 2 2 7.2e-05 0.0043 8.7 0.2 4 21 330 347 327 354 0.89 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_23 - 184 KAP_NTPase PF07693.9 325 5.1e-21 67.1 0.0 1 1 1.9e-22 5.7e-21 66.9 0.0 1 164 26 182 26 183 0.93 # 21078 # 21629 # -1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.562 1_22 - 506 KAP_NTPase PF07693.9 325 1.4e-12 39.3 0.0 1 1 7e-14 2.1e-12 38.8 0.0 210 323 2 100 1 102 0.84 # 19433 # 20950 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.528 1_27 - 475 PIF1 PF05970.9 364 1.5e-05 16.2 0.1 1 3 0.00013 0.0079 7.3 0.0 20 57 6 43 2 50 0.87 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 PIF1 PF05970.9 364 1.5e-05 16.2 0.1 2 3 0.00034 0.02 5.9 0.0 14 57 319 362 313 388 0.84 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 PIF1 PF05970.9 364 1.5e-05 16.2 0.1 3 3 0.098 5.9 -2.2 0.0 10 39 429 457 423 465 0.74 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_25 - 117 HTH_5 PF01022.15 47 2.7e-19 60.9 0.4 1 1 6.5e-21 3.9e-19 60.3 0.4 1 45 14 59 14 61 0.98 # 23055 # 23405 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.538 1_27 - 475 Helicase_RecD PF05127.9 177 0.00011 14.0 0.9 1 2 0.0011 0.068 5.0 0.1 3 47 14 58 12 89 0.85 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 Helicase_RecD PF05127.9 177 0.00011 14.0 0.9 2 2 0.00023 0.014 7.2 0.0 2 71 332 401 331 455 0.76 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_10 PF12846.2 304 2.9e-07 22.3 0.5 1 2 4.8e-06 0.00029 12.5 0.0 2 80 9 86 8 262 0.87 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_10 PF12846.2 304 2.9e-07 22.3 0.5 2 2 0.00012 0.0075 7.8 0.1 3 42 329 370 327 397 0.83 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_25 - 117 HTH_20 PF12840.2 61 8.3e-12 37.0 0.1 1 1 2.3e-13 1.4e-11 36.3 0.1 2 61 7 66 6 66 0.96 # 23055 # 23405 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.538 1_27 - 475 ArsA_ATPase PF02374.10 305 1.1e-123 404.2 0.0 1 2 2e-91 4e-90 294.0 0.0 2 301 9 293 8 297 0.97 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 ArsA_ATPase PF02374.10 305 1.1e-123 404.2 0.0 2 2 1.4e-34 2.7e-33 107.4 0.0 3 154 329 468 327 472 0.94 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_32 - 118 ArsA_ATPase PF02374.10 305 2e-11 35.6 0.0 1 1 1e-12 2e-11 35.6 0.0 187 300 4 116 1 117 0.91 # 27948 # 28301 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.630 1_28 - 113 ArsA_ATPase PF02374.10 305 3.9e-11 34.7 0.0 1 1 2.2e-12 4.4e-11 34.5 0.0 200 300 12 111 4 112 0.93 # 25251 # 25589 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.522 1_27 - 475 AAA_31 PF13614.1 157 5.5e-12 38.1 0.1 1 3 4.4e-08 1.3e-06 20.6 0.0 5 49 12 56 10 74 0.89 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_31 PF13614.1 157 5.5e-12 38.1 0.1 2 3 0.011 0.33 3.0 0.0 99 128 115 146 97 155 0.85 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 AAA_31 PF13614.1 157 5.5e-12 38.1 0.1 3 3 5.1e-05 0.0015 10.6 0.0 3 47 330 373 328 450 0.73 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_7 - 196 AAA_31 PF13614.1 157 0.00026 13.1 0.1 1 2 0.022 0.65 2.1 0.0 19 42 10 32 5 53 0.81 # 4062 # 4649 # -1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.437 1_7 - 196 AAA_31 PF13614.1 157 0.00026 13.1 0.1 2 2 0.00015 0.0045 9.1 0.1 110 152 58 98 39 102 0.82 # 4062 # 4649 # -1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.437 1_27 - 475 TIGR02397 TIGR02397 355 0.0001 13.5 0.8 1 2 0.00036 0.021 5.8 0.1 38 54 10 26 4 38 0.77 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 TIGR02397 TIGR02397 355 0.0001 13.5 0.8 2 2 0.0004 0.024 5.7 0.1 40 59 331 350 321 355 0.84 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 IstB_IS21 PF01695.12 178 1.4e-11 36.3 0.1 1 2 3.5e-07 2.1e-05 16.2 0.0 50 84 11 45 3 50 0.92 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_27 - 475 IstB_IS21 PF01695.12 178 1.4e-11 36.3 0.1 2 2 1.5e-07 9e-06 17.4 0.0 49 83 329 363 320 386 0.84 # 23837 # 25261 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.530 1_21 - 187 HHH_8 PF14716.1 68 0.00034 13.0 0.0 1 1 1e-05 0.00062 12.2 0.0 22 45 6 29 1 43 0.78 # 18806 # 19366 # -1 # ID=1_21;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.508 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/fc81fdf8-215f-4451-a819-addbdea51c2e # Target file: checkm_output/bins/pn74/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pn74/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/fc81fdf8-215f-4451-a819-addbdea51c2e checkm_output/bins/pn74/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:23:52 2017 # [ok]