# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_3 - 336 ABC_tran PF00005.22 137 8.8e-10 27.7 9.3 1 1 1.6e-08 8e-08 21.4 9.3 13 135 26 280 15 281 0.64 # 2790 # 3797 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.324 1_3 - 336 SMC_N PF02463.14 220 9.3e-11 30.0 12.6 1 1 1.1e-09 5.6e-09 24.2 12.6 12 203 12 316 3 330 0.80 # 2790 # 3797 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.324 1_3 - 336 AAA_21 PF13304.1 303 1.4e-26 82.7 13.2 1 1 3.8e-27 1.9e-26 82.3 13.2 1 302 26 316 26 317 0.57 # 2790 # 3797 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.324 1_3 - 336 AAA_29 PF13555.1 62 9.3e-07 17.1 0.0 1 1 3.8e-07 1.9e-06 16.1 0.0 12 54 14 55 11 63 0.79 # 2790 # 3797 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.324 1_3 - 336 TIGR00611 TIGR00611 365 9.1e-06 13.3 1.9 1 2 2.9e-06 1.5e-05 12.6 0.4 22 47 23 48 3 119 0.78 # 2790 # 3797 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.324 1_3 - 336 TIGR00611 TIGR00611 365 9.1e-06 13.3 1.9 2 2 0.055 0.28 -1.5 0.0 47 73 261 287 250 314 0.76 # 2790 # 3797 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.324 1_3 - 336 DUF258 PF03193.11 161 5e-06 14.4 0.0 1 1 2.1e-06 1e-05 13.4 0.0 31 60 20 49 3 115 0.87 # 2790 # 3797 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.324 1_3 - 336 NACHT PF05729.7 166 1.2e-06 16.9 0.0 1 1 5.1e-07 2.6e-06 15.9 0.0 3 77 27 106 25 129 0.78 # 2790 # 3797 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.324 1_3 - 336 AAA_15 PF13175.1 415 2.6e-20 61.4 39.4 1 2 3.2e-05 0.00016 9.4 28.9 20 168 14 221 3 223 0.72 # 2790 # 3797 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.324 1_3 - 336 AAA_15 PF13175.1 415 2.6e-20 61.4 39.4 2 2 3.5e-16 1.8e-15 45.5 29.5 248 415 87 315 73 315 0.64 # 2790 # 3797 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.324 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/4008c625-fc8f-44be-b796-ef78c4820848 # Target file: checkm_output/bins/pn59/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pn59/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/4008c625-fc8f-44be-b796-ef78c4820848 checkm_output/bins/pn59/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:23:29 2017 # [ok]