# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_10 - 339 HHH_3 PF12836.2 65 1.6e-05 17.6 0.0 1 1 4.4e-07 4e-05 16.3 0.0 13 56 211 254 208 256 0.92 # 6176 # 7192 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.462 4_1 - 209 ABC_tran PF00005.22 137 6.8e-30 96.9 0.2 1 1 9.6e-32 8.7e-30 96.6 0.2 2 137 18 165 17 165 0.94 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 3_2 - 53 HTH_22 PF13309.1 64 0.00013 14.5 0.1 1 1 4.6e-06 0.00042 12.9 0.1 26 64 6 39 1 39 0.82 # 783 # 941 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.491 5_2 - 304 rve_3 PF13683.1 67 5.9e-20 63.4 0.1 1 1 1.7e-20 2.2e-19 61.6 0.0 2 67 218 283 217 283 0.98 # 982 # 1893 # 1 # ID=5_2;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.548 2_17 - 224 rve_3 PF13683.1 67 7.2e-20 63.1 0.0 1 1 1.3e-20 1.7e-19 61.9 0.0 2 67 138 203 137 203 0.98 # 16445 # 17116 # -1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.537 1_5 - 273 rve_3 PF13683.1 67 8.1e-20 63.0 0.2 1 1 1.4e-20 1.9e-19 61.8 0.2 2 67 194 260 193 260 0.98 # 4802 # 5620 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.512 1_1 - 124 rve_3 PF13683.1 67 1.9e-14 45.8 0.0 1 1 2e-15 2.6e-14 45.3 0.0 5 67 43 105 39 105 0.93 # 43 # 414 # -1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 9_1 - 211 rve_3 PF13683.1 67 5.7e-09 28.2 0.0 1 1 7.3e-10 9.5e-09 27.5 0.0 4 40 167 203 164 210 0.84 # 2 # 634 # 1 # ID=9_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.559 3_3 - 328 rve_3 PF13683.1 67 1.5e-07 23.7 0.1 1 1 2.5e-08 3.3e-07 22.6 0.1 9 52 156 200 152 205 0.93 # 965 # 1948 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 2_12 - 70 rve_3 PF13683.1 67 1.3e-05 17.5 0.0 1 1 1.4e-06 1.8e-05 17.1 0.0 6 55 10 62 2 65 0.89 # 8804 # 9013 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.457 3_4 - 266 Sigma54_activat PF00158.21 168 0.0003 13.1 0.1 1 1 0.00015 0.014 7.6 0.1 19 42 94 117 82 191 0.79 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_2 - 53 HTH_DeoR PF08220.7 57 0.0002 13.7 0.0 1 1 2.3e-06 0.00021 13.6 0.0 5 38 9 41 6 51 0.77 # 783 # 941 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.491 4_1 - 209 FtsK_SpoIIIE PF01580.13 205 0.00057 12.1 0.0 1 1 1.1e-05 0.001 11.3 0.0 29 56 18 45 6 67 0.87 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 1_6 - 384 HTH_40 PF14493.1 91 6e-05 16.1 0.2 1 2 0.00012 0.011 8.8 0.0 5 32 12 39 8 50 0.89 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_6 - 384 HTH_40 PF14493.1 91 6e-05 16.1 0.2 2 2 0.0034 0.31 4.2 0.0 10 31 71 92 62 103 0.87 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_6 - 384 HTH_38 PF13936.1 44 3.8e-25 80.0 2.1 1 2 6.1e-06 0.00014 14.2 0.0 4 42 4 42 1 43 0.90 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_6 - 384 HTH_38 PF13936.1 44 3.8e-25 80.0 2.1 2 2 5.6e-21 1.3e-19 62.4 1.2 4 44 58 98 55 98 0.97 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 3_2 - 53 HTH_38 PF13936.1 44 8.1e-09 27.8 0.1 1 1 4.4e-10 1e-08 27.5 0.1 5 42 2 39 2 41 0.94 # 783 # 941 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.491 1_22 - 96 HTH_38 PF13936.1 44 0.00027 13.3 0.0 1 1 1.9e-05 0.00043 12.7 0.0 11 39 36 65 31 66 0.88 # 19692 # 19979 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 2_11 - 403 HTH_38 PF13936.1 44 0.00077 11.8 0.0 1 1 7.7e-05 0.0017 10.7 0.0 11 29 105 123 103 125 0.90 # 7308 # 8516 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_22 - 96 MarR PF01047.17 59 0.00013 14.5 0.0 1 1 4.5e-06 0.00021 13.8 0.0 8 37 37 66 31 66 0.85 # 19692 # 19979 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 1_6 - 384 MarR PF01047.17 59 0.00092 11.7 5.2 1 2 0.004 0.18 4.4 0.0 18 39 21 42 16 43 0.89 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_6 - 384 MarR PF01047.17 59 0.00092 11.7 5.2 2 2 0.00054 0.024 7.2 0.1 18 37 75 94 70 97 0.88 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_6 - 384 TetR_N PF00440.18 47 0.00014 14.3 0.4 1 3 0.0048 0.44 3.1 0.0 16 34 20 38 19 39 0.92 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_6 - 384 TetR_N PF00440.18 47 0.00014 14.3 0.4 2 3 0.0027 0.24 3.9 0.1 16 35 74 93 72 96 0.89 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_6 - 384 TetR_N PF00440.18 47 0.00014 14.3 0.4 3 3 0.0088 0.8 2.3 0.0 27 43 163 181 160 183 0.79 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 3_4 - 266 AAA_19 PF13245.1 76 6e-08 25.2 0.1 1 1 5.8e-09 2.6e-07 23.1 0.0 13 52 100 135 87 150 0.83 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 4_1 - 209 AAA_19 PF13245.1 76 0.00043 12.8 0.0 1 1 2.1e-05 0.00093 11.8 0.0 9 32 26 48 14 56 0.85 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 1_34 - 215 CbiA PF01656.18 195 4e-10 32.2 0.1 1 1 1.2e-11 5.6e-10 31.7 0.1 1 161 4 143 4 175 0.74 # 28755 # 29399 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.422 3_4 - 266 CbiA PF01656.18 195 5e-05 15.5 0.1 1 1 2e-06 9.1e-05 14.7 0.1 9 63 107 171 100 248 0.67 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_4 - 266 KTI12 PF08433.5 270 0.00058 11.8 0.0 1 1 1.2e-05 0.0011 11.0 0.0 4 82 100 170 99 198 0.78 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_2 - 53 Sigma70_r4_2 PF08281.7 54 1.1e-05 17.7 0.0 1 1 2.5e-07 1.1e-05 17.6 0.0 31 48 22 39 2 40 0.90 # 783 # 941 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.491 1_6 - 384 Sigma70_r4_2 PF08281.7 54 9.8e-05 14.6 0.1 1 2 0.011 0.49 2.8 0.0 26 47 20 41 10 43 0.86 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_6 - 384 Sigma70_r4_2 PF08281.7 54 9.8e-05 14.6 0.1 2 2 0.00027 0.012 7.9 0.2 27 49 75 97 54 101 0.91 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 9_1 - 211 rve PF00665.21 120 3.8e-32 103.7 0.0 1 1 5e-33 5.7e-32 103.2 0.0 3 119 78 192 76 193 0.96 # 2 # 634 # 1 # ID=9_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.559 1_5 - 273 rve PF00665.21 120 3.3e-27 87.8 0.0 1 1 4.8e-28 5.5e-27 87.1 0.0 2 119 106 221 105 222 0.97 # 4802 # 5620 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.512 2_17 - 224 rve PF00665.21 120 3.8e-25 81.1 0.0 1 1 4.7e-26 5.4e-25 80.7 0.0 3 119 43 165 41 166 0.97 # 16445 # 17116 # -1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.537 5_2 - 304 rve PF00665.21 120 5.9e-25 80.5 0.0 1 1 1e-25 1.1e-24 79.6 0.0 3 119 123 245 121 246 0.97 # 982 # 1893 # 1 # ID=5_2;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.548 3_3 - 328 rve PF00665.21 120 9e-20 63.8 0.0 1 1 1.4e-20 1.6e-19 63.0 0.0 3 120 50 177 49 177 0.94 # 965 # 1948 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 1_6 - 384 rve PF00665.21 120 6.6e-19 61.0 0.0 1 1 1.3e-19 1.5e-18 59.9 0.0 3 120 228 337 226 337 0.94 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_1 - 124 rve PF00665.21 120 1.2e-14 47.2 0.0 1 1 3.6e-15 4.1e-14 45.5 0.0 53 119 2 67 1 68 0.96 # 43 # 414 # -1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 2_12 - 70 rve PF00665.21 120 0.00021 14.2 0.0 1 1 3.4e-05 0.00039 13.3 0.0 87 119 1 33 1 34 0.92 # 8804 # 9013 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.457 1_27 - 363 Glyco_trans_1_2 PF13524.1 92 1.5e-09 30.8 0.0 1 1 3.2e-11 2.9e-09 29.9 0.0 2 91 265 356 263 357 0.95 # 23747 # 24835 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.423 3_4 - 266 AFG1_ATPase PF03969.11 362 1.3e-06 20.2 0.0 1 1 1.9e-08 1.7e-06 19.8 0.0 63 227 98 258 53 263 0.80 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 4_1 - 209 AAA_23 PF13476.1 202 9.5e-05 15.5 5.5 1 1 2.4e-06 0.00022 14.3 5.5 11 42 18 50 14 201 0.82 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 3_4 - 266 AAA_24 PF13479.1 213 0.00068 12.0 0.0 1 1 1.3e-05 0.0012 11.2 0.0 5 23 99 117 95 152 0.86 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 5_1 - 122 CPSase_L_D3 PF02787.14 123 0.00046 12.7 0.2 1 2 0.0027 0.25 3.9 0.0 5 31 11 37 8 49 0.85 # 659 # 1024 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.519 5_1 - 122 CPSase_L_D3 PF02787.14 123 0.00046 12.7 0.2 2 2 0.00031 0.029 7.0 0.1 42 80 76 112 73 117 0.89 # 659 # 1024 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.519 4_1 - 209 SMC_N PF02463.14 220 7.6e-08 24.6 3.3 1 1 5.5e-09 5e-07 21.9 3.3 24 204 27 201 15 208 0.71 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 5_1 - 122 HTH_Tnp_1 PF01527.15 76 3.4e-21 67.8 1.1 1 1 1.9e-22 4.4e-21 67.5 0.6 2 74 8 87 7 89 0.89 # 659 # 1024 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.519 2_4 - 173 HTH_Tnp_1 PF01527.15 76 2.1e-13 42.9 0.1 1 3 1.1e-08 2.4e-07 23.5 0.1 7 54 2 50 1 56 0.92 # 1857 # 2375 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 2_4 - 173 HTH_Tnp_1 PF01527.15 76 2.1e-13 42.9 0.1 2 3 1.2e-05 0.00027 13.7 0.0 4 34 56 86 53 105 0.87 # 1857 # 2375 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 2_4 - 173 HTH_Tnp_1 PF01527.15 76 2.1e-13 42.9 0.1 3 3 0.04 0.91 2.4 0.0 7 29 118 140 115 148 0.88 # 1857 # 2375 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 2_21 - 100 HTH_Tnp_1 PF01527.15 76 5e-11 35.3 2.9 1 1 2.8e-12 6.3e-11 34.9 2.9 3 76 11 79 9 79 0.90 # 18711 # 19010 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.503 1_6 - 384 HTH_Tnp_1 PF01527.15 76 0.00043 13.0 0.1 1 2 0.0011 0.026 7.4 0.0 4 47 2 44 1 69 0.82 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_6 - 384 HTH_Tnp_1 PF01527.15 76 0.00043 13.0 0.1 2 2 0.09 2 1.3 0.0 18 42 69 93 64 121 0.83 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_6 - 384 GerE PF00196.14 58 4e-06 18.9 0.4 1 2 0.00038 0.017 7.3 0.0 10 37 12 39 4 43 0.89 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_6 - 384 GerE PF00196.14 58 4e-06 18.9 0.4 2 2 0.00022 0.01 8.0 0.1 15 37 71 93 58 98 0.70 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 3_2 - 53 GerE PF00196.14 58 4.9e-06 18.6 0.0 1 1 1.2e-07 5.6e-06 18.5 0.0 17 41 16 40 4 42 0.87 # 783 # 941 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.491 3_4 - 266 Bac_DnaA PF00308.13 219 2.1e-12 39.9 0.0 1 1 4e-14 3.6e-12 39.1 0.0 36 139 99 199 71 212 0.87 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 4_1 - 209 TIGR03263 TIGR03263 180 8.4e-05 14.7 0.2 1 2 8.9e-06 0.00081 11.5 0.1 3 19 29 45 27 54 0.88 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 4_1 - 209 TIGR03263 TIGR03263 180 8.4e-05 14.7 0.2 2 2 0.016 1.5 0.9 0.0 149 166 103 120 91 130 0.78 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 1_34 - 215 MipZ PF09140.6 261 1.9e-08 26.4 2.0 1 2 0.00083 0.076 4.8 0.4 7 24 8 25 2 38 0.71 # 28755 # 29399 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.422 1_34 - 215 MipZ PF09140.6 261 1.9e-08 26.4 2.0 2 2 9.6e-09 8.7e-07 21.0 0.0 70 133 45 108 27 125 0.84 # 28755 # 29399 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.422 1_27 - 363 Glyco_trans_4_2 PF13477.1 139 1.3e-06 21.1 0.1 1 1 2.7e-08 2.4e-06 20.2 0.1 16 107 22 111 13 137 0.80 # 23747 # 24835 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.423 2_11 - 403 DDE_Tnp_ISL3 PF01610.12 249 2.4e-05 16.8 0.1 1 2 7.3e-05 0.0067 8.8 0.0 31 82 201 251 188 263 0.86 # 7308 # 8516 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_11 - 403 DDE_Tnp_ISL3 PF01610.12 249 2.4e-05 16.8 0.1 2 2 0.00086 0.078 5.2 0.2 159 233 275 349 251 363 0.63 # 7308 # 8516 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 4_1 - 209 AAA_21 PF13304.1 303 2.7e-18 59.7 2.4 1 1 2e-18 1.8e-16 53.7 2.4 1 302 29 199 29 200 0.87 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 1_22 - 96 Sigma70_r4 PF04545.11 50 0.00033 12.8 0.0 1 1 6.8e-06 0.00062 11.9 0.0 8 42 30 68 28 72 0.86 # 19692 # 19979 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 3_4 - 266 AAA PF00004.24 132 3.7e-09 29.7 0.0 1 1 1.3e-10 1.2e-08 28.1 0.0 1 74 100 174 100 202 0.73 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_7 - 655 KorB PF08535.5 93 1.9e-05 17.6 0.0 1 1 6e-07 5.5e-05 16.1 0.0 2 43 152 193 151 204 0.93 # 7347 # 9311 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.584 2_6 - 94 HTH_37 PF13744.1 80 4.3e-14 44.9 0.0 1 1 1.2e-15 5.2e-14 44.7 0.0 12 73 25 85 14 89 0.91 # 2779 # 3060 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.475 1_22 - 96 HTH_37 PF13744.1 80 1.9e-10 33.2 0.0 1 1 4.9e-12 2.2e-10 33.0 0.0 19 79 34 93 13 94 0.91 # 19692 # 19979 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 1_5 - 273 rve_2 PF13333.1 52 6.9e-15 47.7 0.7 1 1 4.9e-16 1.5e-14 46.7 0.7 1 51 212 267 212 267 0.93 # 4802 # 5620 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.512 9_1 - 211 rve_2 PF13333.1 52 2.4e-10 33.2 0.8 1 2 0.011 0.32 4.0 0.0 41 52 53 64 40 64 0.75 # 2 # 634 # 1 # ID=9_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.559 9_1 - 211 rve_2 PF13333.1 52 2.4e-10 33.2 0.8 2 2 4.6e-10 1.4e-08 27.5 0.3 1 28 183 210 183 210 0.96 # 2 # 634 # 1 # ID=9_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.559 1_1 - 124 rve_2 PF13333.1 52 4.2e-09 29.2 0.0 1 1 2.4e-10 7.2e-09 28.5 0.0 1 44 58 104 58 112 0.88 # 43 # 414 # -1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 2_9 - 321 Hydantoinase_A PF01968.13 290 1.3e-08 26.9 0.2 1 3 0.054 4.9 -1.2 0.0 154 175 130 151 94 155 0.79 # 4747 # 5709 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.388 2_9 - 321 Hydantoinase_A PF01968.13 290 1.3e-08 26.9 0.2 2 3 3.1e-06 0.00028 12.8 0.0 68 97 156 183 147 192 0.82 # 4747 # 5709 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.388 2_9 - 321 Hydantoinase_A PF01968.13 290 1.3e-08 26.9 0.2 3 3 8.3e-06 0.00075 11.4 0.0 214 265 242 297 198 307 0.78 # 4747 # 5709 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.388 1_22 - 96 HTH_25 PF13413.1 62 1.5e-05 17.4 0.0 1 1 4.9e-07 2.2e-05 16.8 0.0 1 33 37 69 37 84 0.94 # 19692 # 19979 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 2_6 - 94 HTH_25 PF13413.1 62 8.1e-05 15.1 0.0 1 1 2.8e-06 0.00013 14.4 0.0 2 35 36 69 35 88 0.91 # 2779 # 3060 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.475 4_1 - 209 AAA_16 PF13191.1 185 6.5e-06 19.0 0.1 1 1 1.9e-07 8.8e-06 18.6 0.1 19 52 22 55 16 195 0.73 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 3_4 - 266 AAA_16 PF13191.1 185 7.9e-06 18.7 1.7 1 2 0.026 1.2 1.8 0.0 128 173 26 88 4 95 0.61 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_4 - 266 AAA_16 PF13191.1 185 7.9e-06 18.7 1.7 2 2 5.4e-06 0.00025 13.9 0.9 23 51 96 124 88 195 0.82 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_4 - 266 AAA_22 PF13401.1 131 2.9e-07 23.5 0.3 1 2 5.1e-05 0.0023 10.8 0.0 5 21 98 114 94 134 0.85 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_4 - 266 AAA_22 PF13401.1 131 2.9e-07 23.5 0.3 2 2 7.4e-05 0.0033 10.3 0.1 77 121 147 195 132 203 0.72 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 4_1 - 209 AAA_22 PF13401.1 131 7.1e-06 19.0 0.7 1 1 6.5e-07 3e-05 17.0 0.7 4 112 27 183 24 200 0.51 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 1_27 - 363 Glyco_trans_1_4 PF13692.1 135 1.5e-14 47.1 0.0 1 1 5.5e-16 2.5e-14 46.4 0.0 2 135 185 327 184 327 0.83 # 23747 # 24835 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.423 2_14 - 637 Glyco_trans_1_4 PF13692.1 135 0.00012 15.0 0.0 1 1 1.3e-05 0.00057 12.8 0.0 35 129 473 582 452 588 0.61 # 9570 # 11480 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.626 3_4 - 266 TIGR00362 TIGR00362 437 4e-14 44.9 0.0 1 1 5.1e-16 4.6e-14 44.7 0.0 138 242 98 199 6 207 0.83 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 6_1 - 266 HTH_AraC PF00165.18 42 7e-18 56.8 1.2 1 2 8.9e-07 8.1e-05 15.2 0.0 1 38 170 208 170 212 0.92 # 319 # 1116 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.282 6_1 - 266 HTH_AraC PF00165.18 42 7e-18 56.8 1.2 2 2 1.9e-14 1.7e-12 39.6 0.3 6 41 223 259 221 260 0.93 # 319 # 1116 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.282 4_1 - 209 AAA_29 PF13555.1 62 1.3e-06 20.7 0.2 1 1 3.4e-08 3.1e-06 19.5 0.1 17 40 22 44 16 50 0.81 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 3_2 - 53 HTH_Tnp_Tc3_1 PF11427.3 50 6.2e-06 18.6 0.0 1 1 8.1e-08 7.3e-06 18.4 0.0 12 43 9 40 2 45 0.91 # 783 # 941 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.491 4_1 - 209 MutS_V PF00488.16 235 4.1e-06 19.1 0.1 1 1 7e-08 6.3e-06 18.5 0.1 28 131 12 120 4 124 0.81 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 3_4 - 266 AAA_28 PF13521.1 163 4.9e-05 16.1 1.0 1 2 1e-05 0.00048 12.9 0.1 2 47 100 150 99 162 0.68 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_4 - 266 AAA_28 PF13521.1 163 4.9e-05 16.1 1.0 2 2 0.0093 0.42 3.3 0.0 95 135 144 178 131 200 0.71 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 4_1 - 209 AAA_28 PF13521.1 163 0.00014 14.6 0.1 1 1 6.9e-06 0.00032 13.5 0.1 2 18 30 46 29 61 0.86 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 4_5 - 121 HTH_32 PF13565.1 77 2.1e-08 27.7 0.6 1 2 4e-09 1.8e-07 24.7 0.1 31 77 7 62 2 62 0.84 # 5431 # 5793 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=9bp;gc_cont=0.523 4_5 - 121 HTH_32 PF13565.1 77 2.1e-08 27.7 0.6 2 2 0.06 2.7 1.7 0.0 29 45 81 96 64 117 0.45 # 5431 # 5793 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=9bp;gc_cont=0.523 1_6 - 384 HTH_32 PF13565.1 77 4.6e-08 26.6 2.1 1 2 0.00054 0.025 8.3 0.3 21 75 50 93 36 95 0.63 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_6 - 384 HTH_32 PF13565.1 77 4.6e-08 26.6 2.1 2 2 1e-09 4.6e-08 26.6 2.1 1 77 90 173 90 173 0.69 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 2_6 - 94 HTH_3 PF01381.17 55 1.7e-15 49.5 0.0 1 1 8e-17 2.4e-15 49.0 0.0 1 51 36 86 36 89 0.96 # 2779 # 3060 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.475 1_22 - 96 HTH_3 PF01381.17 55 2.7e-13 42.4 0.1 1 1 1.6e-14 4.7e-13 41.6 0.1 1 51 38 88 38 91 0.94 # 19692 # 19979 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 3_2 - 53 HTH_3 PF01381.17 55 0.00041 13.0 0.1 1 1 2e-05 0.00059 12.5 0.1 1 36 10 43 10 46 0.85 # 783 # 941 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.491 1_6 - 384 HTH_23 PF13384.1 50 2.9e-09 29.2 0.7 1 1 1.4e-07 1.4e-06 20.7 0.3 14 42 71 98 48 103 0.77 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 3_2 - 53 HTH_23 PF13384.1 50 1.1e-08 27.3 0.0 1 1 1.3e-09 1.3e-08 27.1 0.0 9 40 9 40 8 47 0.90 # 783 # 941 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.491 5_1 - 122 HTH_23 PF13384.1 50 2.1e-07 23.3 0.1 1 1 4.2e-08 4.2e-07 22.3 0.1 3 48 14 60 12 62 0.90 # 659 # 1024 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.519 1_7 - 655 HTH_23 PF13384.1 50 5.6e-07 21.9 0.7 1 1 6.5e-07 6.6e-06 18.5 0.0 13 40 149 176 143 180 0.91 # 7347 # 9311 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.584 2_21 - 100 HTH_23 PF13384.1 50 1.1e-05 17.8 0.0 1 1 2.2e-06 2.3e-05 16.8 0.0 7 40 20 52 14 60 0.86 # 18711 # 19010 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.503 2_6 - 94 HTH_23 PF13384.1 50 1.1e-05 17.8 0.1 1 1 1.9e-06 1.9e-05 17.1 0.1 3 37 29 64 24 86 0.84 # 2779 # 3060 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.475 2_4 - 173 HTH_23 PF13384.1 50 7.3e-05 15.2 0.7 1 1 5.1e-05 0.00051 12.5 0.3 3 45 3 47 3 52 0.90 # 1857 # 2375 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 6_1 - 266 HTH_23 PF13384.1 50 0.00013 14.4 0.0 1 2 0.007 0.07 5.7 0.0 12 36 172 196 163 202 0.80 # 319 # 1116 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.282 6_1 - 266 HTH_23 PF13384.1 50 0.00013 14.4 0.0 2 2 0.0041 0.042 6.4 0.0 9 40 215 249 208 257 0.73 # 319 # 1116 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.282 2_11 - 403 HTH_23 PF13384.1 50 0.0007 12.1 0.1 1 1 0.00028 0.0029 10.1 0.0 9 27 106 124 105 125 0.93 # 7308 # 8516 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 3_2 - 53 HTH_7 PF02796.10 45 1.9e-07 23.7 0.2 1 1 4.5e-09 2.1e-07 23.6 0.2 6 43 2 39 1 41 0.91 # 783 # 941 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.491 1_6 - 384 HTH_7 PF02796.10 45 7.6e-06 18.6 0.6 1 3 0.0087 0.4 3.5 0.0 12 32 11 31 3 32 0.87 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_6 - 384 HTH_7 PF02796.10 45 7.6e-06 18.6 0.6 2 3 0.0002 0.0089 8.7 0.1 12 38 65 91 58 94 0.85 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_6 - 384 HTH_7 PF02796.10 45 7.6e-06 18.6 0.6 3 3 0.025 1.1 2.0 0.2 31 41 162 172 160 174 0.82 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 2_6 - 94 HTH_19 PF12844.2 64 1e-12 40.8 0.0 1 1 4.7e-14 1.4e-12 40.3 0.0 3 54 35 86 34 90 0.96 # 2779 # 3060 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.475 1_22 - 96 HTH_19 PF12844.2 64 7.6e-11 34.8 0.1 1 1 4.8e-12 1.5e-10 33.9 0.0 2 56 36 90 35 91 0.92 # 19692 # 19979 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 1_37 - 112 HTH_19 PF12844.2 64 0.00048 13.0 0.1 1 1 2.3e-05 0.00069 12.5 0.1 17 60 42 89 37 93 0.86 # 30794 # 31129 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.515 4_1 - 209 NB-ARC PF00931.17 287 0.00013 13.6 0.2 1 2 2.8e-06 0.00025 12.7 0.0 8 39 16 47 12 77 0.85 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 4_1 - 209 NB-ARC PF00931.17 287 0.00013 13.6 0.2 2 2 0.081 7.3 -2.0 0.0 83 83 136 136 82 196 0.58 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 3_4 - 266 Mg_chelatase PF01078.16 207 0.00048 12.1 0.0 1 1 1e-05 0.00094 11.1 0.0 23 42 98 117 84 124 0.89 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_6 - 384 HTH_29 PF13551.1 112 5.4e-08 25.8 4.8 1 2 0.0022 0.034 7.1 0.0 2 66 11 67 10 71 0.79 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_6 - 384 HTH_29 PF13551.1 112 5.4e-08 25.8 4.8 2 2 6.5e-07 9.9e-06 18.5 1.9 7 108 70 173 64 177 0.82 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 4_5 - 121 HTH_29 PF13551.1 112 1.8e-07 24.1 0.3 1 1 1.9e-08 2.9e-07 23.4 0.0 53 111 4 65 2 66 0.88 # 5431 # 5793 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=9bp;gc_cont=0.523 2_4 - 173 HTH_29 PF13551.1 112 2.7e-06 20.3 0.1 1 1 4.4e-07 6.6e-06 19.1 0.0 8 70 15 71 9 79 0.79 # 1857 # 2375 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 5_1 - 122 HTH_29 PF13551.1 112 2.1e-05 17.5 0.2 1 1 2.1e-06 3.1e-05 16.9 0.2 11 71 29 88 18 109 0.67 # 659 # 1024 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.519 3_2 - 53 HTH_29 PF13551.1 112 2.7e-05 17.1 0.0 1 1 2e-06 3.1e-05 16.9 0.0 8 35 14 40 8 49 0.80 # 783 # 941 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.491 1_7 - 655 HTH_29 PF13551.1 112 0.00023 14.1 0.0 1 1 6.1e-05 0.00093 12.2 0.0 4 37 145 178 142 234 0.85 # 7347 # 9311 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_27 - 363 Glyco_trans_4_4 PF13579.1 160 5e-10 32.5 0.1 1 2 2.1e-09 2e-07 24.1 0.0 1 160 13 157 13 157 0.80 # 23747 # 24835 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.423 1_27 - 363 Glyco_trans_4_4 PF13579.1 160 5e-10 32.5 0.1 2 2 0.0079 0.72 2.7 0.1 83 107 172 195 165 272 0.74 # 23747 # 24835 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.423 1_37 - 112 DDE_Tnp_IS66 PF03050.9 271 2.4e-30 98.4 0.2 1 1 2.9e-32 2.7e-30 98.2 0.2 123 226 1 111 1 111 0.97 # 30794 # 31129 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.515 4_1 - 209 Arch_ATPase PF01637.13 234 1.9e-05 17.2 1.8 1 1 4.3e-06 0.0002 13.9 1.8 18 148 25 183 17 196 0.57 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 3_4 - 266 Arch_ATPase PF01637.13 234 0.0003 13.3 0.0 1 1 3.3e-05 0.0015 11.0 0.0 18 120 95 192 81 196 0.61 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_4 - 266 PhoH PF02562.11 205 1.4e-06 20.5 0.0 1 1 3.8e-08 3.5e-06 19.1 0.0 15 47 93 125 80 139 0.87 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_4 - 266 AAA_5 PF07728.9 139 0.00021 13.8 4.3 1 1 2.4e-06 0.00022 13.8 0.8 1 19 99 117 99 190 0.84 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_34 - 215 TIGR01968 TIGR01968 261 8.1e-05 14.5 1.7 1 2 5.8e-06 0.00052 11.8 0.7 3 50 3 44 1 48 0.76 # 28755 # 29399 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.422 1_34 - 215 TIGR01968 TIGR01968 261 8.1e-05 14.5 1.7 2 2 0.0086 0.78 1.4 0.0 101 140 63 102 48 120 0.75 # 28755 # 29399 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.422 4_1 - 209 AAA_18 PF13238.1 129 1.1e-07 25.0 2.8 1 1 2.7e-07 1.2e-05 18.4 2.8 1 42 30 81 30 208 0.77 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 3_4 - 266 AAA_18 PF13238.1 129 0.00046 13.3 0.3 1 1 2.8e-05 0.0013 11.9 0.2 1 19 100 118 100 166 0.80 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 4_1 - 209 DUF258 PF03193.11 161 3.2e-07 22.4 0.2 1 1 5.7e-09 5.2e-07 21.7 0.2 26 55 17 47 3 73 0.84 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 1_27 - 363 Glycos_transf_1 PF00534.15 172 2.9e-27 87.9 0.0 1 1 5.1e-29 4.7e-27 87.2 0.0 15 162 185 331 179 341 0.91 # 23747 # 24835 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.423 3_4 - 266 AAA_35 PF14516.1 331 0.00038 11.9 0.3 1 3 0.0049 0.45 1.8 0.1 238 272 11 42 4 59 0.78 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_4 - 266 AAA_35 PF14516.1 331 0.00038 11.9 0.3 2 3 0.0043 0.4 2.0 0.0 25 75 91 141 77 153 0.77 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_4 - 266 AAA_35 PF14516.1 331 0.00038 11.9 0.3 3 3 0.00073 0.066 4.5 0.1 122 161 153 192 142 200 0.89 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 5_1 - 122 HTH_28 PF13518.1 52 1.7e-08 27.2 0.5 1 1 2e-09 3.5e-08 26.2 0.0 1 43 17 60 17 63 0.93 # 659 # 1024 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.519 1_6 - 384 HTH_28 PF13518.1 52 1.4e-07 24.3 5.1 1 2 0.0053 0.096 5.6 0.0 1 41 9 47 9 55 0.77 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_6 - 384 HTH_28 PF13518.1 52 1.4e-07 24.3 5.1 2 2 3.4e-06 6.2e-05 15.8 0.4 11 41 73 103 65 115 0.79 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 2_4 - 173 HTH_28 PF13518.1 52 3.4e-07 23.0 1.7 1 1 7.8e-08 1.4e-06 21.0 0.9 1 49 6 58 6 58 0.88 # 1857 # 2375 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478 2_21 - 100 HTH_28 PF13518.1 52 5.1e-05 16.1 0.1 1 1 7.1e-06 0.00013 14.8 0.1 14 34 31 51 22 53 0.85 # 18711 # 19010 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.503 3_2 - 53 HTH_28 PF13518.1 52 0.00013 14.7 0.1 1 1 1.1e-05 0.0002 14.2 0.1 7 35 11 40 8 42 0.74 # 783 # 941 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.491 1_22 - 96 HTH_24 PF13412.1 48 1.1e-05 17.6 0.0 1 1 9.3e-07 2.1e-05 16.7 0.0 8 36 37 65 35 66 0.92 # 19692 # 19979 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 1_6 - 384 HTH_24 PF13412.1 48 0.00012 14.2 0.1 1 1 7e-05 0.0016 10.7 0.4 16 40 73 97 71 97 0.92 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 3_2 - 53 HTH_24 PF13412.1 48 0.00016 13.9 0.1 1 1 1.4e-05 0.00032 12.9 0.0 21 40 21 40 20 40 0.93 # 783 # 941 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.491 2_6 - 94 HTH_24 PF13412.1 48 0.00019 13.6 0.0 1 1 1.3e-05 0.0003 13.0 0.0 3 36 30 63 28 64 0.91 # 2779 # 3060 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.475 3_4 - 266 Sigma54_activ_2 PF14532.1 138 0.00023 14.0 0.0 1 1 1e-05 0.00091 12.1 0.0 17 111 93 201 82 225 0.68 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 6_1 - 266 HTH_18 PF12833.2 81 5.3e-15 48.1 0.1 1 1 1.1e-16 9.9e-15 47.3 0.1 1 79 183 259 183 260 0.97 # 319 # 1116 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.282 4_5 - 121 HTH_33 PF13592.1 60 2.7e-09 29.3 0.1 1 1 5.1e-11 4.7e-09 28.5 0.1 2 54 33 85 32 90 0.94 # 5431 # 5793 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=9bp;gc_cont=0.523 4_1 - 209 MMR_HSR1 PF01926.18 116 0.0011 11.8 3.7 1 1 2.7e-05 0.0024 10.6 3.4 2 19 30 47 29 194 0.88 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 3_4 - 266 DEAD PF00270.24 169 0.00041 12.6 0.1 1 2 5.6e-05 0.0051 9.1 0.1 13 63 96 143 85 180 0.72 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_4 - 266 DEAD PF00270.24 169 0.00041 12.6 0.1 2 2 0.005 0.45 2.7 0.0 110 130 149 169 134 198 0.69 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_6 - 94 HTH_31 PF13560.1 64 1.3e-14 47.0 0.0 1 1 5.2e-16 1.6e-14 46.7 0.0 2 56 32 85 31 91 0.95 # 2779 # 3060 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.475 1_22 - 96 HTH_31 PF13560.1 64 1e-12 40.9 0.0 1 1 4.6e-14 1.4e-12 40.5 0.0 6 57 38 88 34 93 0.95 # 19692 # 19979 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 3_2 - 53 HTH_31 PF13560.1 64 0.00056 12.9 0.0 1 1 2.1e-05 0.00063 12.8 0.0 14 40 17 43 9 51 0.81 # 783 # 941 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.491 3_2 - 53 HTH_36 PF13730.1 55 3.2e-05 16.8 0.0 1 1 3.9e-07 3.6e-05 16.7 0.0 28 48 20 40 2 40 0.85 # 783 # 941 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.491 4_1 - 209 T2SE PF00437.15 272 8.9e-05 14.2 0.1 1 1 1.9e-06 0.00017 13.3 0.1 121 148 20 47 6 60 0.84 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 2_9 - 321 StbA PF06406.6 318 5.6e-156 511.0 1.6 1 1 6.9e-158 6.3e-156 510.9 1.6 1 317 1 317 1 318 0.99 # 4747 # 5709 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.388 3_4 - 266 NACHT PF05729.7 166 0.00012 14.5 0.4 1 1 6.1e-05 0.0028 10.1 0.4 3 21 100 118 98 217 0.88 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 4_1 - 209 NACHT PF05729.7 166 0.00064 12.2 0.0 1 1 3.1e-05 0.0014 11.1 0.0 2 19 29 46 28 54 0.89 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 2_9 - 321 YbaB_DNA_bd PF02575.11 93 0.00054 12.6 0.1 1 3 0.038 3.4 0.5 0.0 33 63 129 160 112 160 0.80 # 4747 # 5709 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.388 2_9 - 321 YbaB_DNA_bd PF02575.11 93 0.00054 12.6 0.1 2 3 0.028 2.6 0.9 0.0 63 78 201 216 195 223 0.84 # 4747 # 5709 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.388 2_9 - 321 YbaB_DNA_bd PF02575.11 93 0.00054 12.6 0.1 3 3 0.00045 0.041 6.6 0.0 63 87 247 271 235 276 0.84 # 4747 # 5709 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.388 3_4 - 266 AAA_17 PF13207.1 121 9e-06 19.3 0.0 1 1 1.1e-06 5.1e-05 16.9 0.0 2 64 100 156 99 200 0.57 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 4_1 - 209 AAA_17 PF13207.1 121 2.5e-05 17.9 2.4 1 1 8.8e-07 4e-05 17.2 2.4 2 19 30 47 29 178 0.87 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 2_11 - 403 Transposase_mut PF00872.13 381 5.2e-122 399.7 0.0 1 1 1.3e-123 5.8e-122 399.6 0.0 11 379 12 377 1 379 0.94 # 7308 # 8516 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 5_4 - 95 Transposase_mut PF00872.13 381 5.7e-11 34.2 0.0 1 1 1.3e-12 5.8e-11 34.2 0.0 5 83 5 83 1 92 0.75 # 2552 # 2836 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.502 4_1 - 209 TIGR02211 TIGR02211 221 1.7e-43 141.1 2.1 1 1 2.2e-45 2e-43 140.9 2.1 19 210 15 204 3 208 0.90 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 3_4 - 266 AAA_25 PF13481.1 194 6.3e-07 21.7 0.1 1 1 2.5e-08 1.1e-06 20.9 0.1 22 65 81 130 60 193 0.70 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 4_1 - 209 AAA_25 PF13481.1 194 0.00013 14.2 0.0 1 1 1.1e-05 0.00051 12.2 0.0 31 50 25 44 8 76 0.89 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 4_1 - 209 AAA_15 PF13175.1 415 2.6e-09 29.3 7.1 1 2 3e-06 0.00028 12.8 6.4 12 116 17 115 3 146 0.69 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 4_1 - 209 AAA_15 PF13175.1 415 2.6e-09 29.3 7.1 2 2 4.6e-07 4.2e-05 15.4 0.0 365 415 153 199 143 199 0.88 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 3_4 - 266 RuvB_N PF05496.7 234 9.5e-06 17.5 0.1 1 1 2.2e-07 2e-05 16.5 0.1 48 119 95 176 73 187 0.73 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_4 - 266 AAA_14 PF13173.1 128 2.7e-08 26.6 0.0 1 1 2.5e-09 1.1e-07 24.6 0.0 3 96 98 197 96 206 0.72 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 4_1 - 209 AAA_14 PF13173.1 128 5.6e-05 15.8 1.0 1 1 3e-06 0.00014 14.6 1.0 1 22 26 47 26 193 0.73 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 1_34 - 215 VirC1 PF07015.6 231 0.00057 11.7 0.0 1 2 0.00083 0.076 4.8 0.0 3 29 3 29 1 36 0.81 # 28755 # 29399 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.422 1_34 - 215 VirC1 PF07015.6 231 0.00057 11.7 0.0 2 2 0.00071 0.065 5.0 0.0 87 190 77 181 59 193 0.65 # 28755 # 29399 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.422 2_10 - 339 Transposase_20 PF02371.11 87 3.6e-29 93.6 0.1 1 1 2.6e-30 1.2e-28 91.9 0.2 1 76 211 286 211 297 0.95 # 6176 # 7192 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.462 10_1 - 165 Transposase_20 PF02371.11 87 1.9e-14 46.3 0.0 1 1 7.9e-16 3.6e-14 45.5 0.0 3 43 113 153 111 154 0.95 # 115 # 609 # -1 # ID=10_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.485 3_2 - 53 HTH_Tnp_ISL3 PF13542.1 52 2.5e-05 16.2 0.0 1 1 6.8e-07 3.1e-05 15.9 0.0 31 51 21 41 17 42 0.91 # 783 # 941 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.491 5_1 - 122 HTH_Tnp_ISL3 PF13542.1 52 0.00032 12.7 1.6 1 1 1.4e-05 0.00066 11.7 0.1 7 42 8 44 8 46 0.92 # 659 # 1024 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.519 3_4 - 266 AAA_33 PF13671.1 143 0.00027 13.6 0.0 1 1 7.6e-06 0.00069 12.3 0.0 2 40 100 143 100 169 0.64 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_14 - 637 Glyco_transf_41 PF13844.1 468 1e-06 19.7 0.0 1 2 2e-05 0.0018 9.0 0.0 95 125 359 389 356 409 0.84 # 9570 # 11480 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.626 2_14 - 637 Glyco_transf_41 PF13844.1 468 1e-06 19.7 0.0 2 2 2.6e-05 0.0024 8.6 0.0 369 453 525 611 451 625 0.85 # 9570 # 11480 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.626 5_1 - 122 CENP-B_N PF04218.8 53 2.9e-06 19.5 0.0 1 1 6e-08 5.4e-06 18.6 0.0 3 44 9 51 8 55 0.86 # 659 # 1024 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.519 3_4 - 266 ArgK PF03308.11 267 0.00011 13.8 0.0 1 1 4.5e-06 0.00021 12.9 0.0 27 66 95 134 81 136 0.85 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 4_1 - 209 ArgK PF03308.11 267 0.00033 12.2 0.0 1 1 1.1e-05 0.00052 11.6 0.0 15 50 13 48 4 59 0.85 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 4_1 - 209 SbcCD_C PF13558.1 90 7.5e-05 15.4 0.1 1 1 4.3e-06 0.00039 13.1 0.1 30 88 134 179 108 181 0.82 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 4_1 - 209 NTPase_1 PF03266.10 168 9.5e-05 14.9 0.4 1 1 4e-06 0.00018 14.0 0.4 2 19 30 47 29 137 0.77 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 3_4 - 266 NTPase_1 PF03266.10 168 0.00028 13.4 0.0 1 2 0.0012 0.052 6.0 0.0 2 17 100 115 99 129 0.80 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_4 - 266 NTPase_1 PF03266.10 168 0.00028 13.4 0.0 2 2 0.002 0.093 5.2 0.0 83 107 147 170 136 197 0.76 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 6_2 - 168 DDE_Tnp_IS1 PF03400.8 131 7e-80 258.3 0.9 1 1 9.2e-82 8.4e-80 258.1 0.9 1 131 37 167 37 167 0.99 # 1611 # 2114 # -1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.552 1_27 - 363 Glyco_transf_4 PF13439.1 177 2.4e-08 26.7 0.1 1 1 6.4e-10 5.9e-08 25.4 0.1 4 172 5 159 2 163 0.79 # 23747 # 24835 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.423 9_1 - 211 DDE_Tnp_IS240 PF13610.1 140 4.3e-12 39.0 0.0 1 1 3.6e-13 8.2e-12 38.1 0.0 2 125 82 208 81 209 0.91 # 2 # 634 # 1 # ID=9_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.559 1_5 - 273 DDE_Tnp_IS240 PF13610.1 140 2.7e-07 23.4 0.3 1 1 1.8e-08 4.1e-07 22.8 0.0 2 139 111 252 110 253 0.86 # 4802 # 5620 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.512 2_11 - 403 DDE_Tnp_IS240 PF13610.1 140 0.00013 14.8 0.0 1 1 0.0003 0.0067 9.2 0.0 87 126 326 365 187 375 0.86 # 7308 # 8516 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_1 - 124 DDE_Tnp_IS240 PF13610.1 140 0.00015 14.5 0.0 1 1 7.8e-06 0.00018 14.3 0.0 65 137 22 95 2 97 0.80 # 43 # 414 # -1 # ID=1_1;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 1_22 - 96 HTH_26 PF13443.1 63 1.5e-08 27.5 0.0 1 1 9.3e-10 2.8e-08 26.7 0.0 5 55 41 90 37 91 0.91 # 19692 # 19979 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 2_6 - 94 HTH_26 PF13443.1 63 5.2e-06 19.4 0.0 1 1 2.5e-07 7.7e-06 18.9 0.0 5 52 35 85 31 87 0.82 # 2779 # 3060 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.475 3_2 - 53 HTH_26 PF13443.1 63 0.00046 13.2 0.0 1 1 1.6e-05 0.00048 13.1 0.0 4 39 11 47 9 52 0.84 # 783 # 941 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.491 1_6 - 384 HTH_17 PF12728.2 51 3.2e-05 16.9 0.9 1 3 0.00023 0.021 8.0 0.0 5 32 24 53 23 58 0.82 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_6 - 384 HTH_17 PF12728.2 51 3.2e-05 16.9 0.9 2 3 0.023 2.1 1.5 0.0 2 26 75 99 75 108 0.79 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_6 - 384 HTH_17 PF12728.2 51 3.2e-05 16.9 0.9 3 3 0.0063 0.58 3.3 0.1 10 20 161 171 159 204 0.77 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 4_3 - 401 AviRa PF11599.3 246 0.00079 11.2 1.0 1 1 2.4e-05 0.0022 9.8 0.9 68 124 289 347 270 387 0.82 # 2096 # 3298 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=12bp;gc_cont=0.292 3_2 - 53 HTH_11 PF08279.7 55 2e-06 20.2 0.0 1 1 3.2e-08 2.9e-06 19.7 0.0 16 37 18 39 4 40 0.77 # 783 # 941 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.491 2_2 - 88 DDE_Tnp_1_5 PF13737.1 112 6.3e-18 57.8 0.0 1 1 8.9e-20 8.1e-18 57.4 0.0 3 51 21 69 19 72 0.96 # 848 # 1111 # -1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.542 3_2 - 53 Sigma70_ECF PF07638.6 185 8.7e-05 15.0 0.0 1 1 9.8e-07 8.9e-05 15.0 0.0 143 173 9 39 2 49 0.87 # 783 # 941 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.491 1_22 - 96 MarR_2 PF12802.2 62 2.3e-06 20.0 0.0 1 1 1.2e-07 3.6e-06 19.4 0.0 8 41 35 66 31 66 0.91 # 19692 # 19979 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 2_6 - 94 MarR_2 PF12802.2 62 5.5e-05 15.6 0.0 1 1 3e-06 9.2e-05 14.9 0.0 9 41 34 64 32 72 0.89 # 2779 # 3060 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.475 1_6 - 384 MarR_2 PF12802.2 62 0.00043 12.7 0.1 1 1 0.00016 0.005 9.4 0.3 20 44 73 97 53 99 0.83 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 3_2 - 53 LacI PF00356.16 46 9e-05 14.9 0.0 1 1 1.3e-06 0.00012 14.5 0.0 2 25 20 43 19 49 0.85 # 783 # 941 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.491 3_2 - 53 HTH_Mga PF08280.6 59 1.9e-05 17.2 0.0 1 1 2.7e-07 2.5e-05 16.8 0.0 22 42 20 40 18 45 0.89 # 783 # 941 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.491 1_6 - 384 Phage_terminase PF10668.4 60 7.9e-05 15.2 0.2 1 3 0.0049 0.45 3.2 0.0 13 39 14 37 9 39 0.78 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_6 - 384 Phage_terminase PF10668.4 60 7.9e-05 15.2 0.2 2 3 0.00027 0.025 7.2 0.0 21 40 73 92 69 96 0.91 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_6 - 384 Phage_terminase PF10668.4 60 7.9e-05 15.2 0.2 3 3 0.072 6.6 -0.5 0.1 32 42 141 151 127 160 0.78 # 5705 # 6856 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.459 3_4 - 266 AAA_10 PF12846.2 304 9.6e-05 14.6 0.0 1 1 4.1e-06 0.00019 13.7 0.0 2 35 98 131 97 173 0.88 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 4_1 - 209 AAA_10 PF12846.2 304 0.00012 14.3 0.6 1 1 6.7e-06 0.0003 13.0 0.3 4 27 30 53 27 67 0.75 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 4_1 - 209 AAA_13 PF13166.1 712 0.00015 13.0 0.2 1 2 0.02 1.8 -0.5 0.2 20 49 31 59 22 122 0.73 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 4_1 - 209 AAA_13 PF13166.1 712 0.00015 13.0 0.2 2 2 5e-06 0.00046 11.5 0.0 495 571 131 196 88 201 0.82 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 3_4 - 266 ArsA_ATPase PF02374.10 305 0.0006 11.6 0.0 1 1 1e-05 0.00094 11.0 0.0 6 38 102 134 98 169 0.91 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 5_4 - 95 T2SK PF03934.8 280 0.00047 12.1 0.1 1 1 5.4e-06 0.00049 12.0 0.1 79 141 11 67 5 81 0.68 # 2552 # 2836 # 1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.502 2_11 - 403 MULE PF10551.4 93 2.1e-15 49.5 0.0 1 1 1.5e-16 1.4e-14 46.9 0.0 16 91 185 260 171 262 0.84 # 7308 # 8516 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 3_4 - 266 IstB_IS21 PF01695.12 178 6.6e-77 249.7 0.7 1 2 0.069 3.2 -0.1 0.2 83 111 4 32 2 33 0.88 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_4 - 266 IstB_IS21 PF01695.12 178 6.6e-77 249.7 0.7 2 2 4.8e-78 2.2e-76 248.0 0.0 1 177 51 227 51 228 0.99 # 1948 # 2745 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 4_1 - 209 IstB_IS21 PF01695.12 178 0.00046 12.4 0.1 1 2 0.00013 0.0058 8.8 0.0 44 65 24 45 16 58 0.85 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 4_1 - 209 IstB_IS21 PF01695.12 178 0.00046 12.4 0.1 2 2 0.03 1.4 1.1 0.0 102 145 148 190 129 201 0.75 # 747 # 1373 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=6bp;gc_cont=0.303 5_2 - 304 HTH_21 PF13276.1 60 3.6e-19 61.4 1.9 1 2 1.3e-18 2.9e-17 55.3 0.9 7 57 50 106 45 109 0.77 # 982 # 1893 # 1 # ID=5_2;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.548 5_2 - 304 HTH_21 PF13276.1 60 3.6e-19 61.4 1.9 2 2 0.0092 0.21 4.5 0.0 11 34 266 291 257 303 0.77 # 982 # 1893 # 1 # ID=5_2;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.548 9_1 - 211 HTH_21 PF13276.1 60 2.7e-12 39.4 0.1 1 1 4.8e-13 1.1e-11 37.4 0.0 9 59 4 53 1 54 0.91 # 2 # 634 # 1 # ID=9_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.559 1_5 - 273 HTH_21 PF13276.1 60 1.1e-11 37.4 5.4 1 1 1.2e-12 2.8e-11 36.1 5.4 3 59 27 82 23 83 0.89 # 4802 # 5620 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.512 2_22 - 90 HTH_21 PF13276.1 60 8e-10 31.5 0.2 1 1 8.5e-11 1.9e-09 30.2 0.0 4 44 47 86 42 90 0.87 # 19007 # 19276 # 1 # ID=2_22;partial=01;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.567 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/80d78ffe-8508-4808-ac97-b5f4fd87abeb # Target file: checkm_output/bins/pn28/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pn28/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/80d78ffe-8508-4808-ac97-b5f4fd87abeb checkm_output/bins/pn28/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:22:45 2017 # [ok]