# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_3 - 533 APOBEC_N PF08210.6 188 8.5e-07 17.9 0.1 1 1 2.5e-07 1.8e-06 16.8 0.1 40 98 373 422 363 428 0.82 # 1380 # 2978 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.356 1_1 - 92 MerR_1 PF13411.1 69 5e-05 12.3 0.0 1 1 2.2e-05 0.00016 10.7 0.0 4 22 44 62 41 63 0.92 # 3 # 278 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 1_3 - 533 dCMP_cyt_deam_1 PF00383.17 102 9.8e-21 62.6 0.0 1 1 2.5e-21 1.8e-20 61.8 0.0 4 101 252 431 249 432 0.97 # 1380 # 2978 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.356 1_1 - 92 HTH_3 PF01381.17 55 6.3e-13 37.7 0.1 1 1 2.7e-13 1.9e-12 36.1 0.1 1 45 32 76 32 78 0.92 # 3 # 278 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 1_1 - 92 HTH_19 PF12844.2 64 3e-11 32.5 0.0 1 2 0.083 0.58 -0.5 0.0 17 33 10 28 3 31 0.64 # 3 # 278 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 1_1 - 92 HTH_19 PF12844.2 64 3e-11 32.5 0.0 2 2 1.6e-11 1.1e-10 30.6 0.0 4 41 32 71 32 87 0.87 # 3 # 278 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 1_3 - 533 MafB19-deam PF14437.1 146 2.2e-06 16.5 0.0 1 1 6.8e-07 4.7e-06 15.4 0.0 57 119 360 421 346 429 0.81 # 1380 # 2978 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.356 1_1 - 92 HTH_28 PF13518.1 52 1.6e-05 14.1 0.0 1 1 3.2e-06 2.2e-05 13.6 0.0 6 32 32 60 25 73 0.80 # 3 # 278 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 1_1 - 92 HTH_31 PF13560.1 64 8.1e-11 31.3 0.3 1 1 3.7e-11 2.6e-10 29.6 0.3 7 51 33 76 2 80 0.91 # 3 # 278 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.591 1_3 - 533 Bd3614-deam PF14439.1 136 4.9e-06 15.6 0.1 1 2 0.0011 0.0079 5.2 0.0 8 27 271 290 266 295 0.92 # 1380 # 2978 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.356 1_3 - 533 Bd3614-deam PF14439.1 136 4.9e-06 15.6 0.1 2 2 0.00023 0.0016 7.5 0.0 76 120 402 439 380 446 0.80 # 1380 # 2978 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.356 1_3 - 533 XOO_2897-deam PF14440.1 119 3.6e-07 19.1 0.0 1 1 1.1e-07 7.7e-07 18.1 0.0 26 90 363 423 341 443 0.83 # 1380 # 2978 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.356 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/bf499b95-97be-42a7-9ba6-885c71814e3a # Target file: checkm_output/bins/pn151/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pn151/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/bf499b95-97be-42a7-9ba6-885c71814e3a checkm_output/bins/pn151/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:21:18 2017 # [ok]