# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 334 ABC_tran PF00005.22 137 1e-09 27.5 9.6 1 1 1.5e-08 7.7e-08 21.4 9.6 11 135 24 280 14 281 0.64 # 1 # 1002 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.320 1_1 - 334 SMC_N PF02463.14 220 2.9e-10 28.3 13.5 1 1 3.3e-09 1.7e-08 22.6 13.5 3 203 6 316 4 328 0.79 # 1 # 1002 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.320 1_1 - 334 AAA_21 PF13304.1 303 1.1e-26 83.1 13.5 1 1 2.8e-27 1.4e-26 82.7 13.5 1 302 26 316 26 317 0.62 # 1 # 1002 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.320 1_1 - 334 AAA_29 PF13555.1 62 3e-06 15.5 0.0 1 1 1.2e-06 6.2e-06 14.5 0.0 18 55 20 56 10 63 0.72 # 1 # 1002 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.320 1_1 - 334 TIGR00611 TIGR00611 365 7.2e-06 13.6 1.8 1 2 2.4e-06 1.2e-05 12.9 0.4 21 47 22 48 3 124 0.79 # 1 # 1002 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.320 1_1 - 334 TIGR00611 TIGR00611 365 7.2e-06 13.6 1.8 2 2 0.056 0.28 -1.5 0.0 47 73 261 287 250 313 0.76 # 1 # 1002 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.320 1_1 - 334 DUF258 PF03193.11 161 5.7e-06 14.3 0.0 1 1 2.4e-06 1.2e-05 13.2 0.0 31 60 20 49 3 115 0.87 # 1 # 1002 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.320 1_1 - 334 NACHT PF05729.7 166 3.3e-06 15.5 0.0 1 1 1.4e-06 6.8e-06 14.5 0.0 3 76 27 105 25 129 0.76 # 1 # 1002 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.320 1_1 - 334 AAA_15 PF13175.1 415 2.9e-20 61.2 40.0 1 2 2.1e-06 1e-05 13.3 16.8 11 83 9 123 3 131 0.67 # 1 # 1002 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.320 1_1 - 334 AAA_15 PF13175.1 415 2.9e-20 61.2 40.0 2 2 4.1e-16 2e-15 45.3 30.0 247 415 86 315 69 315 0.63 # 1 # 1002 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.320 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/35c0abd3-f6da-435f-aea4-58bf19fbdcfb # Target file: checkm_output/bins/pn143/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pn143/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/35c0abd3-f6da-435f-aea4-58bf19fbdcfb checkm_output/bins/pn143/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:21:05 2017 # [ok]