# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 325 ABC_tran PF00005.22 137 1.1e-09 27.4 9.8 1 1 1.7e-08 8.3e-08 21.3 9.8 11 135 24 280 14 281 0.64 # 3 # 977 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.323 1_1 - 325 SMC_N PF02463.14 220 2.6e-10 28.5 13.2 1 1 2.8e-09 1.4e-08 22.8 13.2 3 202 6 315 4 323 0.79 # 3 # 977 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.323 1_1 - 325 AAA_21 PF13304.1 303 9.6e-27 83.2 13.5 1 1 2.6e-27 1.3e-26 82.8 13.5 1 302 26 316 26 317 0.62 # 3 # 977 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.323 1_1 - 325 AAA_29 PF13555.1 62 2.8e-06 15.6 0.0 1 1 1.2e-06 5.9e-06 14.5 0.0 18 55 20 56 10 63 0.72 # 3 # 977 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.323 1_1 - 325 TIGR00611 TIGR00611 365 7.3e-06 13.6 1.8 1 2 2.3e-06 1.2e-05 12.9 0.4 21 47 22 48 3 124 0.79 # 3 # 977 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.323 1_1 - 325 TIGR00611 TIGR00611 365 7.3e-06 13.6 1.8 2 2 0.06 0.3 -1.6 0.0 47 73 261 287 255 312 0.76 # 3 # 977 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.323 1_1 - 325 DUF258 PF03193.11 161 5.5e-06 14.3 0.0 1 1 2.3e-06 1.1e-05 13.3 0.0 31 60 20 49 3 116 0.87 # 3 # 977 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.323 1_1 - 325 NACHT PF05729.7 166 3.2e-06 15.6 0.0 1 1 1.3e-06 6.5e-06 14.6 0.0 3 76 27 105 25 129 0.76 # 3 # 977 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.323 1_1 - 325 AAA_15 PF13175.1 415 3.3e-20 61.1 40.4 1 2 7.7e-05 0.00038 8.1 26.1 11 129 9 168 3 177 0.66 # 3 # 977 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.323 1_1 - 325 AAA_15 PF13175.1 415 3.3e-20 61.1 40.4 2 2 4.2e-16 2.1e-15 45.2 30.3 247 415 86 315 68 315 0.63 # 3 # 977 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.323 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/abc132a7-aae8-4163-aa88-cba0688fdb74 # Target file: checkm_output/bins/pn142/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pn142/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/abc132a7-aae8-4163-aa88-cba0688fdb74 checkm_output/bins/pn142/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:21:05 2017 # [ok]