# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 42 HTH_3 PF01381.17 55 1.2e-07 20.6 0.0 1 1 2.4e-08 1.4e-07 20.3 0.0 27 53 1 27 1 29 0.94 # 3 # 128 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.349 1_1 - 42 HTH_31 PF13560.1 64 1.6e-05 14.1 0.0 1 1 2.8e-06 1.7e-05 14.0 0.0 32 58 1 26 1 35 0.90 # 3 # 128 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.349 1_3 - 420 DNA_methylase PF00145.12 335 3.1e-37 117.2 0.1 1 1 6.2e-38 3.7e-37 117.0 0.1 4 334 4 400 1 401 0.78 # 764 # 2023 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.328 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/d93be387-7bdc-4adb-8d26-81a38f21f601 # Target file: checkm_output/bins/pn138/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pn138/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/d93be387-7bdc-4adb-8d26-81a38f21f601 checkm_output/bins/pn138/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:21:01 2017 # [ok]