# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_23 - 464 ATP-synt_ab PF00006.20 215 0.00024 13.5 0.0 1 1 9e-06 0.00045 12.6 0.0 15 70 49 105 45 165 0.81 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 ATP-synt_ab PF00006.20 215 0.00054 12.4 0.1 1 1 1.7e-05 0.00084 11.7 0.1 13 50 47 84 42 188 0.72 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_25 - 226 Cons_hypoth95 PF03602.10 183 8.9e-06 18.1 0.0 1 2 0.00022 0.022 7.1 0.0 112 156 18 64 2 82 0.65 # 25638 # 26315 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 2_25 - 226 Cons_hypoth95 PF03602.10 183 8.9e-06 18.1 0.0 2 2 5e-05 0.005 9.1 0.0 41 62 162 183 145 213 0.80 # 25638 # 26315 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 1_9 - 359 KaiC PF06745.8 227 3.5e-05 15.9 0.0 1 1 1.2e-06 6.1e-05 15.1 0.0 13 46 41 78 20 98 0.76 # 4919 # 5995 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.546 2_23 - 464 KaiC PF06745.8 227 0.00012 14.1 0.0 1 1 5e-06 0.00025 13.1 0.0 19 143 49 188 46 193 0.69 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_9 - 359 RecA PF00154.16 323 1.5e-47 155.0 0.0 1 1 2.5e-49 2.5e-47 154.3 0.0 22 281 16 306 9 341 0.80 # 4919 # 5995 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.546 4_2 - 341 HTH_IclR PF09339.5 52 2.2e-06 20.1 0.1 1 1 5.9e-08 5.9e-06 18.8 0.1 15 40 14 39 13 40 0.95 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_3 - 1038 HHH_3 PF12836.2 65 8e-05 15.5 0.0 1 2 0.013 0.67 2.9 0.0 20 40 794 814 792 817 0.93 # 2163 # 5276 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.549 3_3 - 1038 HHH_3 PF12836.2 65 8e-05 15.5 0.0 2 2 0.00015 0.0077 9.1 0.0 19 48 900 930 895 932 0.82 # 2163 # 5276 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.549 2_10 - 341 HHH_3 PF12836.2 65 0.00016 14.6 0.0 1 1 7.7e-06 0.00038 13.3 0.0 14 57 212 255 210 257 0.95 # 11679 # 12701 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.519 1_37 - 213 ABC_tran PF00005.22 137 1.3e-14 47.6 0.1 1 1 1.4e-13 3.6e-12 39.7 0.1 1 134 39 152 39 155 0.83 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_22 - 639 ABC_tran PF00005.22 137 3.3e-07 23.6 3.5 1 2 0.0007 0.017 8.3 0.1 19 32 41 54 40 78 0.87 # 15281 # 17197 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_22 - 639 ABC_tran PF00005.22 137 3.3e-07 23.6 3.5 2 2 7.6e-06 0.00019 14.7 0.5 79 126 482 565 251 569 0.82 # 15281 # 17197 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 4_1 - 259 ABC_tran PF00005.22 137 0.00015 15.0 0.3 1 1 4.8e-05 0.0012 12.1 0.0 8 30 98 120 92 135 0.86 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 2_23 - 464 ABC_tran PF00005.22 137 0.00046 13.4 0.0 1 1 4.5e-05 0.0011 12.2 0.0 9 52 47 104 38 198 0.52 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 4_2 - 341 HTH_22 PF13309.1 64 0.00065 12.4 0.0 1 1 1.3e-05 0.0013 11.4 0.0 46 64 21 39 10 39 0.89 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_25 - 226 TIGR00095 TIGR00095 194 0.00027 13.2 0.0 1 2 0.001 0.1 4.8 0.0 123 138 19 34 7 79 0.75 # 25638 # 26315 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 2_25 - 226 TIGR00095 TIGR00095 194 0.00027 13.2 0.0 2 2 0.00032 0.032 6.4 0.0 53 83 164 196 154 209 0.76 # 25638 # 26315 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 2_23 - 464 DUF815 PF05673.8 250 5e-06 18.5 0.0 1 1 1.9e-07 9.5e-06 17.6 0.0 44 103 40 99 25 106 0.89 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 DUF815 PF05673.8 250 1.1e-05 17.4 0.0 1 1 3.3e-07 1.6e-05 16.8 0.0 32 103 30 99 7 106 0.83 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 4_2 - 341 HTH_AsnC-type PF13404.1 42 0.00058 12.3 0.0 1 1 1.5e-05 0.0015 11.0 0.0 18 36 18 36 15 40 0.91 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_10 - 341 HHH_5 PF14520.1 60 0.00014 14.9 0.0 1 1 4.5e-06 0.00045 13.3 0.0 6 49 213 253 210 257 0.91 # 11679 # 12701 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.519 4_2 - 341 rve_3 PF13683.1 67 0.00042 12.8 0.1 1 1 1.6e-05 0.0016 10.9 0.0 6 65 220 287 215 288 0.87 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_23 - 464 Sigma54_activat PF00158.21 168 7.1e-05 15.2 0.0 1 1 4.1e-06 0.00014 14.3 0.0 11 67 37 96 33 100 0.79 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 Sigma54_activat PF00158.21 168 0.00013 14.4 0.1 1 2 2.9e-05 0.00095 11.6 0.0 16 51 43 78 30 96 0.78 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 Sigma54_activat PF00158.21 168 0.00013 14.4 0.1 2 2 0.078 2.6 0.4 0.1 131 150 174 194 155 208 0.67 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 4_1 - 259 Sigma54_activat PF00158.21 168 0.00013 14.3 0.1 1 1 2.4e-05 0.00081 11.8 0.1 18 53 97 132 81 197 0.72 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 1_37 - 213 FtsK_SpoIIIE PF01580.13 205 0.00023 13.6 0.0 1 2 7.9e-06 0.00079 11.8 0.0 20 58 30 69 17 73 0.81 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 FtsK_SpoIIIE PF01580.13 205 0.00023 13.6 0.0 2 2 0.057 5.7 -0.8 0.0 175 200 159 184 90 197 0.72 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 4_2 - 341 HTH_40 PF14493.1 91 0.00018 14.6 0.0 1 1 3.8e-06 0.00038 13.6 0.0 4 35 8 39 5 69 0.91 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_34 - 520 Helicase_C PF00271.26 78 4.8e-14 45.0 0.0 1 1 1.5e-15 1.5e-13 43.4 0.0 2 78 387 463 386 463 0.97 # 23569 # 25128 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.513 4_2 - 341 HTH_38 PF13936.1 44 1.3e-11 36.8 0.5 1 1 5.2e-13 5.2e-11 34.9 0.2 6 41 3 38 2 40 0.94 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_11 - 277 TIGR01932 TIGR01932 318 1.3e-09 29.9 1.8 1 1 1.7e-11 1.7e-09 29.5 1.8 145 268 116 240 86 245 0.84 # 6290 # 7120 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.515 1_11 - 277 TIGR01933 TIGR01933 261 1.5e-05 17.1 1.8 1 1 2e-07 2e-05 16.7 1.8 81 201 111 234 82 251 0.80 # 6290 # 7120 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.515 1_37 - 213 MobB PF03205.9 140 3.5e-06 19.7 0.0 1 1 1.6e-07 8.2e-06 18.5 0.0 2 37 51 86 50 102 0.89 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_23 - 464 MobB PF03205.9 140 0.00072 12.2 0.0 1 1 3.1e-05 0.0015 11.1 0.0 3 41 52 88 50 98 0.88 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 4_2 - 341 TetR_N PF00440.18 47 0.0007 12.2 0.2 1 1 1.7e-05 0.0017 10.9 0.0 16 36 17 37 16 43 0.86 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 4_1 - 259 AAA_19 PF13245.1 76 0.00042 13.0 0.0 1 1 2.1e-05 0.001 11.7 0.0 10 37 102 128 95 153 0.81 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 1_42 - 419 AAA_19 PF13245.1 76 0.00073 12.2 0.0 1 1 3e-05 0.0015 11.2 0.0 22 58 36 70 20 94 0.79 # 29453 # 30709 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 2_20 - 412 CbiA PF01656.18 195 4.4e-23 74.6 0.0 1 1 8.2e-25 8.2e-23 73.7 0.0 1 158 122 329 122 361 0.69 # 20796 # 22031 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 1_37 - 213 PRK PF00485.13 194 3.8e-05 16.2 0.0 1 1 6.8e-07 6.8e-05 15.4 0.0 1 37 51 87 51 106 0.79 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 KTI12 PF08433.5 270 4.6e-07 22.2 0.1 1 2 1e-07 1e-05 17.7 0.0 4 41 52 89 50 103 0.89 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 KTI12 PF08433.5 270 4.6e-07 22.2 0.1 2 2 0.0043 0.43 2.6 0.0 187 218 149 180 136 209 0.65 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_25 - 226 MethyltransfD12 PF02086.10 260 0.00026 13.4 0.0 1 2 0.013 1.3 1.2 0.0 176 188 19 31 12 90 0.83 # 25638 # 26315 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 2_25 - 226 MethyltransfD12 PF02086.10 260 0.00026 13.4 0.0 2 2 2.8e-05 0.0028 10.0 0.0 20 46 163 189 148 197 0.79 # 25638 # 26315 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 4_2 - 341 Sigma70_r4_2 PF08281.7 54 8.2e-08 24.6 0.0 1 1 1.9e-09 1.9e-07 23.4 0.0 25 48 16 39 12 40 0.94 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_18 - 355 Rep_3 PF01051.16 222 7e-40 129.8 0.1 1 1 9.8e-42 9.8e-40 129.4 0.1 3 222 27 285 25 285 0.95 # 9715 # 10779 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 4_2 - 341 rve PF00665.21 120 1.4e-22 72.9 0.0 1 1 2.8e-24 2.8e-22 72.0 0.0 3 118 118 242 117 244 0.96 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 4_1 - 259 AFG1_ATPase PF03969.11 362 7.1e-05 14.6 0.2 1 1 2.7e-06 0.00027 12.7 0.2 63 216 102 253 42 258 0.72 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 4_2 - 341 Terminase_5 PF06056.7 58 0.00061 12.3 0.0 1 1 1.4e-05 0.0014 11.1 0.0 9 36 13 40 9 44 0.85 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_22 - 639 AAA_23 PF13476.1 202 6.2e-19 62.0 0.0 1 1 6.5e-20 6.5e-18 58.7 0.0 1 177 5 245 5 510 0.78 # 15281 # 17197 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 2_23 - 464 AAA_24 PF13479.1 213 5.5e-06 19.0 0.1 1 1 1.5e-07 1.5e-05 17.5 0.1 6 33 52 87 49 172 0.80 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_25 - 226 Methyltransf_26 PF13659.1 117 3.1e-13 42.7 0.1 1 2 1.9e-08 1.9e-06 20.8 0.0 53 114 3 71 2 74 0.77 # 25638 # 26315 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 2_25 - 226 Methyltransf_26 PF13659.1 117 3.1e-13 42.7 0.1 2 2 4e-08 4e-06 19.8 0.0 4 44 167 206 164 220 0.83 # 25638 # 26315 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 1_37 - 213 Zeta_toxin PF06414.7 201 7.2e-06 18.1 0.0 1 2 2.2e-07 2.2e-05 16.5 0.0 14 52 47 85 37 106 0.80 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 Zeta_toxin PF06414.7 201 7.2e-06 18.1 0.0 2 2 0.062 6.2 -1.3 0.0 170 185 155 170 122 201 0.61 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_23 - 464 AAA_30 PF13604.1 196 3e-05 16.5 0.0 1 1 2.6e-06 0.00013 14.5 0.0 4 53 35 84 34 181 0.65 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 AAA_30 PF13604.1 196 4.7e-05 15.9 0.8 1 1 3.9e-06 0.0002 13.9 0.7 17 50 48 81 42 183 0.83 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_22 - 639 SMC_N PF02463.14 220 3.7e-15 48.6 0.4 1 1 1.3e-16 6.4e-15 47.8 0.4 32 200 41 618 3 635 0.91 # 15281 # 17197 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_37 - 213 SMC_N PF02463.14 220 2.9e-05 16.3 0.6 1 2 0.00081 0.04 6.0 0.1 25 41 50 66 37 73 0.81 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 SMC_N PF02463.14 220 2.9e-05 16.3 0.6 2 2 9.8e-05 0.0049 9.0 0.0 135 204 117 192 67 208 0.64 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 4_2 - 341 GerE PF00196.14 58 1.8e-06 20.1 0.0 1 1 3.6e-08 3.6e-06 19.2 0.0 17 39 16 38 8 40 0.89 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 4_1 - 259 Bac_DnaA PF00308.13 219 1.1e-09 31.2 0.0 1 1 3.1e-11 1.6e-09 30.6 0.0 37 136 104 201 74 206 0.85 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 2_23 - 464 Bac_DnaA PF00308.13 219 2e-05 17.2 0.0 1 2 1.4e-05 0.00072 12.1 0.0 37 82 52 97 40 113 0.75 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_23 - 464 Bac_DnaA PF00308.13 219 2e-05 17.2 0.0 2 2 0.012 0.62 2.5 0.0 79 131 141 193 118 260 0.68 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_20 - 412 MipZ PF09140.6 261 6e-06 18.4 0.4 1 2 3.3e-05 0.0033 9.4 0.1 1 50 120 174 120 200 0.75 # 20796 # 22031 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 2_20 - 412 MipZ PF09140.6 261 6e-06 18.4 0.4 2 2 0.00022 0.022 6.7 0.0 90 135 247 292 237 297 0.89 # 20796 # 22031 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 2_25 - 226 UPF0020 PF01170.13 180 1.8e-06 20.5 0.0 1 2 8.8e-05 0.0088 8.5 0.0 102 122 16 36 3 88 0.72 # 25638 # 26315 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 2_25 - 226 UPF0020 PF01170.13 180 1.8e-06 20.5 0.0 2 2 2.9e-05 0.0029 10.1 0.0 27 54 162 188 158 216 0.72 # 25638 # 26315 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 2_8 - 254 GyrI-like PF06445.10 155 1e-12 41.2 1.0 1 1 2.9e-14 2.9e-12 39.8 1.0 3 154 80 221 78 222 0.80 # 8892 # 9653 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.339 2_9 - 403 DDE_Tnp_ISL3 PF01610.12 249 0.00018 14.0 0.1 1 3 0.056 5.6 -0.7 0.1 125 187 93 150 78 163 0.64 # 10002 # 11210 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 2_9 - 403 DDE_Tnp_ISL3 PF01610.12 249 0.00018 14.0 0.1 2 3 0.00052 0.052 6.0 0.0 31 82 201 251 192 266 0.85 # 10002 # 11210 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 2_9 - 403 DDE_Tnp_ISL3 PF01610.12 249 0.00018 14.0 0.1 3 3 0.0016 0.16 4.3 0.1 161 232 277 348 251 355 0.59 # 10002 # 11210 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 1_22 - 639 AAA_21 PF13304.1 303 2.5e-05 17.2 0.0 1 2 0.00046 0.046 6.5 0.0 8 22 42 56 41 97 0.88 # 15281 # 17197 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_22 - 639 AAA_21 PF13304.1 303 2.5e-05 17.2 0.0 2 2 0.00011 0.011 8.5 0.0 204 297 539 615 441 616 0.82 # 15281 # 17197 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 4_2 - 341 Sigma70_r4 PF04545.11 50 0.00042 12.6 0.2 1 1 2e-05 0.002 10.4 0.1 19 39 16 36 9 39 0.88 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_55 - 1526 RRF PF01765.14 165 0.028 6.8 13.0 1 2 0.0045 0.45 2.9 0.0 98 151 270 323 265 327 0.94 # 38970 # 43547 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.567 1_55 - 1526 RRF PF01765.14 165 0.028 6.8 13.0 2 2 4.9e-05 0.0049 9.2 2.2 108 152 748 793 723 804 0.71 # 38970 # 43547 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.567 4_2 - 341 DUF2316 PF10078.4 89 0.00052 12.9 0.0 1 1 1.1e-05 0.0011 11.9 0.0 20 82 14 85 5 91 0.82 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_23 - 464 AAA PF00004.24 132 2.9e-08 26.9 0.0 1 1 2.3e-09 1.2e-07 25.0 0.0 2 114 53 208 52 226 0.67 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 4_1 - 259 AAA PF00004.24 132 1.8e-07 24.3 0.0 1 1 6.3e-09 3.1e-07 23.6 0.0 1 74 104 179 104 213 0.77 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 4_2 - 341 KorB PF08535.5 93 0.0007 12.7 0.0 1 1 2.9e-05 0.0029 10.7 0.0 2 30 16 44 15 108 0.78 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_40 - 89 LexA_DNA_bind PF01726.11 65 0.0006 12.3 0.2 1 1 2.1e-05 0.0021 10.6 0.2 3 64 2 63 1 64 0.84 # 28347 # 28613 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.524 2_25 - 226 N6_N4_Mtase PF01555.13 231 2.9e-37 121.2 0.0 1 1 3.1e-37 3.1e-35 114.6 0.0 1 228 21 200 21 203 0.91 # 25638 # 26315 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 1_37 - 213 cobW PF02492.14 178 0.0004 12.7 0.1 1 1 6.9e-06 0.00069 12.0 0.1 2 47 51 95 50 114 0.77 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_23 - 464 AAA_16 PF13191.1 185 3.8e-17 55.8 0.0 1 1 1.9e-18 6.5e-17 55.0 0.0 1 179 30 190 30 198 0.80 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 AAA_16 PF13191.1 185 1.9e-08 27.4 0.0 1 1 7.7e-10 2.6e-08 27.0 0.0 12 87 38 107 29 182 0.76 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 4_1 - 259 AAA_16 PF13191.1 185 6.8e-05 15.8 1.1 1 1 7.9e-06 0.00026 13.9 0.1 16 41 96 118 84 159 0.78 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 2_23 - 464 AAA_22 PF13401.1 131 5.7e-09 29.1 0.1 1 1 6e-10 2e-08 27.4 0.1 5 123 50 201 46 209 0.74 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 AAA_22 PF13401.1 131 2.6e-07 23.7 0.0 1 1 2e-08 6.6e-07 22.5 0.0 3 86 48 176 42 195 0.73 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 4_1 - 259 AAA_22 PF13401.1 131 1.5e-06 21.3 0.2 1 2 6.6e-05 0.0022 11.1 0.0 5 21 102 118 98 130 0.83 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 4_1 - 259 AAA_22 PF13401.1 131 1.5e-06 21.3 0.2 2 2 0.0011 0.036 7.1 0.0 88 103 153 180 125 202 0.66 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 4_1 - 259 TIGR00362 TIGR00362 437 6e-11 34.6 0.0 1 1 1.4e-12 7.1e-11 34.3 0.0 139 240 103 202 27 209 0.86 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 2_23 - 464 TIGR00362 TIGR00362 437 0.00061 11.4 0.0 1 1 3e-05 0.0015 10.2 0.0 140 165 52 77 39 106 0.80 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_8 - 254 HTH_AraC PF00165.18 42 4e-13 41.8 0.4 1 1 7e-15 7e-13 41.0 0.4 2 41 20 57 19 58 0.95 # 8892 # 9653 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.339 4_2 - 341 NUMOD1 PF07453.8 37 0.00025 13.8 0.1 1 1 4.9e-06 0.00049 12.9 0.1 20 37 21 38 19 38 0.91 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_37 - 213 AAA_29 PF13555.1 62 8.5e-08 24.6 0.0 1 1 6.2e-09 2.1e-07 23.4 0.0 8 40 35 66 32 71 0.91 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_22 - 639 AAA_29 PF13555.1 62 7.7e-05 15.1 0.1 1 1 1.4e-05 0.00047 12.6 0.0 31 51 41 61 4 66 0.81 # 15281 # 17197 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 4_1 - 259 AAA_29 PF13555.1 62 0.00074 12.0 0.0 1 1 4.3e-05 0.0014 11.1 0.0 19 59 97 138 88 140 0.72 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 4_1 - 259 AAA_28 PF13521.1 163 0.0011 11.9 1.6 1 2 0.068 6.8 -0.5 0.1 85 110 35 62 4 81 0.68 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 4_1 - 259 AAA_28 PF13521.1 163 0.0011 11.9 1.6 2 2 3e-05 0.003 10.4 0.2 1 43 103 150 103 171 0.70 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 4_2 - 341 HTH_3 PF01381.17 55 9.1e-07 21.6 0.1 1 1 3.5e-08 1.8e-06 20.7 0.1 7 37 15 45 8 48 0.91 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_17 - 207 HTH_3 PF01381.17 55 0.00013 14.7 2.2 1 1 3.3e-06 0.00017 14.4 0.1 1 28 172 199 172 202 0.93 # 19151 # 19771 # -1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.493 4_2 - 341 HTH_23 PF13384.1 50 8.2e-09 27.9 0.0 1 1 7.7e-10 2.6e-08 26.3 0.0 9 40 9 40 2 43 0.89 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_17 - 207 HTH_23 PF13384.1 50 8.9e-06 18.2 0.3 1 1 6.6e-07 2.2e-05 17.0 0.3 10 40 174 203 162 206 0.76 # 19151 # 19771 # -1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.493 2_31 - 670 HTH_23 PF13384.1 50 0.00047 12.8 0.0 1 1 7.7e-05 0.0026 10.4 0.0 13 40 150 177 144 183 0.89 # 29720 # 31729 # 1 # ID=2_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.614 2_20 - 412 Fer4_NifH PF00142.13 273 6.3e-06 18.4 0.0 1 1 1.2e-07 1.2e-05 17.5 0.0 7 71 127 196 122 205 0.79 # 20796 # 22031 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 4_2 - 341 HTH_7 PF02796.10 45 2.6e-11 36.2 0.3 1 1 6.8e-13 6.8e-11 34.9 0.3 13 44 9 40 5 41 0.93 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 4_2 - 341 HTH_19 PF12844.2 64 1.5e-05 17.9 0.0 1 1 5.4e-07 2.7e-05 17.1 0.0 7 52 12 58 11 70 0.82 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_3 - 129 HTH_19 PF12844.2 64 8.7e-05 15.5 0.0 1 1 3.1e-06 0.00015 14.7 0.0 14 62 27 76 21 78 0.91 # 2281 # 2667 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 2_23 - 464 NB-ARC PF00931.17 287 0.0004 12.2 0.0 1 1 8.9e-06 0.00089 11.0 0.0 20 160 50 226 34 287 0.66 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 4_2 - 341 HTH_29 PF13551.1 112 2.5e-06 20.6 0.0 1 1 8e-08 8e-06 18.9 0.0 6 35 12 40 8 102 0.73 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_7 - 315 TIGR00593 TIGR00593 890 6.5e-37 119.8 0.0 1 1 7.5e-39 7.5e-37 119.6 0.0 3 267 5 276 3 306 0.82 # 3706 # 4650 # 1 # ID=1_7;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527 2_23 - 464 Arch_ATPase PF01637.13 234 1.3e-12 40.7 0.0 1 1 5.8e-14 1.9e-12 40.2 0.0 1 230 31 266 31 270 0.63 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 Arch_ATPase PF01637.13 234 0.00025 13.7 0.0 1 1 9.1e-06 0.0003 13.4 0.0 18 68 47 97 41 177 0.84 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 4_1 - 259 Arch_ATPase PF01637.13 234 0.00093 11.8 0.1 1 1 0.0001 0.0034 10.0 0.0 8 37 89 118 86 139 0.79 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 4_1 - 259 PhoH PF02562.11 205 1e-07 24.2 0.1 1 1 8e-09 4e-07 22.3 0.0 11 48 93 130 82 141 0.80 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 1_42 - 419 PhoH PF02562.11 205 0.0003 12.9 0.0 1 2 5.5e-05 0.0027 9.8 0.0 31 138 36 136 12 146 0.65 # 29453 # 30709 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_42 - 419 PhoH PF02562.11 205 0.0003 12.9 0.0 2 2 0.078 3.9 -0.5 0.0 65 106 351 392 340 396 0.78 # 29453 # 30709 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 3_2 - 412 AAA_5 PF07728.9 139 1.3e-17 56.8 0.0 1 1 6.7e-19 2.2e-17 56.0 0.0 4 126 173 293 172 309 0.92 # 747 # 1982 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.527 2_23 - 464 AAA_5 PF07728.9 139 3.5e-06 19.7 0.0 1 1 9.3e-07 3.1e-05 16.6 0.0 1 47 51 100 51 194 0.73 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 4_1 - 259 AAA_5 PF07728.9 139 2.9e-05 16.7 0.3 1 1 1.1e-05 0.00036 13.2 0.2 1 74 103 172 103 179 0.72 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 1_34 - 520 ResIII PF04851.10 184 8.6e-18 57.7 0.0 1 1 3.2e-19 1.6e-17 56.8 0.0 26 183 112 268 97 269 0.82 # 23569 # 25128 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.513 4_1 - 259 ResIII PF04851.10 184 0.00037 13.3 0.0 1 2 0.00014 0.0069 9.1 0.0 8 50 88 126 49 134 0.78 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 4_1 - 259 ResIII PF04851.10 184 0.00037 13.3 0.0 2 2 0.015 0.76 2.4 0.0 112 163 130 180 124 202 0.72 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 1_34 - 520 SNF2_N PF00176.18 299 2.1e-05 16.3 0.0 1 1 3.5e-07 3.5e-05 15.6 0.0 106 182 186 277 169 285 0.81 # 23569 # 25128 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.513 1_37 - 213 AAA_18 PF13238.1 129 2e-06 21.1 0.0 1 1 3.6e-08 3.6e-06 20.2 0.0 1 39 52 90 52 106 0.77 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_23 - 464 AAA_32 PF13654.1 509 0.00025 12.7 0.0 1 1 4.1e-06 0.00041 11.9 0.0 8 56 29 75 23 82 0.82 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_25 - 226 Methyltransf_15 PF09445.5 164 0.0011 11.5 0.0 1 2 0.035 3.5 0.1 0.0 53 79 4 29 2 33 0.90 # 25638 # 26315 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 2_25 - 226 Methyltransf_15 PF09445.5 164 0.0011 11.5 0.0 2 2 7.1e-05 0.0071 8.8 0.0 3 31 166 194 164 207 0.86 # 25638 # 26315 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 1_37 - 213 DUF258 PF03193.11 161 1.1e-05 17.6 0.0 1 1 3.8e-07 1.9e-05 16.8 0.0 25 85 38 111 13 119 0.76 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 4_1 - 259 DUF258 PF03193.11 161 1.3e-05 17.4 0.0 1 1 3.9e-07 1.9e-05 16.8 0.0 21 78 87 156 69 191 0.71 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 2_23 - 464 AAA_35 PF14516.1 331 8.5e-08 24.0 0.0 1 2 7.5e-06 0.00075 11.0 0.0 22 141 40 174 31 192 0.63 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_23 - 464 AAA_35 PF14516.1 331 8.5e-08 24.0 0.0 2 2 1.7e-05 0.0017 9.9 0.0 214 292 245 346 230 358 0.84 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 4_2 - 341 HTH_28 PF13518.1 52 4.8e-08 25.9 0.1 1 1 2.4e-09 1.2e-07 24.6 0.1 7 34 12 39 8 40 0.89 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_17 - 207 HTH_28 PF13518.1 52 2.7e-05 17.1 0.1 1 1 1.4e-06 7.1e-05 15.7 0.1 8 37 176 205 167 206 0.88 # 19151 # 19771 # -1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.493 2_21 - 324 Ribosomal_S18 PF01084.15 54 0.0066 9.3 5.1 1 3 0.061 6.1 -0.2 0.0 26 46 62 82 58 85 0.87 # 22028 # 22999 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 2_21 - 324 Ribosomal_S18 PF01084.15 54 0.0066 9.3 5.1 2 3 0.0021 0.21 4.5 0.1 39 53 132 146 127 147 0.91 # 22028 # 22999 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 2_21 - 324 Ribosomal_S18 PF01084.15 54 0.0066 9.3 5.1 3 3 0.002 0.2 4.6 0.0 32 47 298 313 295 313 0.90 # 22028 # 22999 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 4_2 - 341 HTH_24 PF13412.1 48 4.5e-07 22.2 0.1 1 1 7.8e-09 7.8e-07 21.4 0.1 10 40 11 40 10 43 0.89 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_37 - 213 Sigma54_activ_2 PF14532.1 138 1.5e-05 18.0 0.0 1 1 2.3e-07 2.3e-05 17.4 0.0 10 95 38 143 33 192 0.72 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_8 - 254 HTH_18 PF12833.2 81 9.7e-15 47.4 0.8 1 1 2e-16 2e-14 46.5 0.6 22 79 1 57 1 58 0.96 # 8892 # 9653 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.339 4_2 - 341 HTH_30 PF13556.1 59 8.9e-05 15.0 0.0 1 1 1.9e-06 0.00019 13.9 0.0 10 34 15 39 10 43 0.86 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_42 - 419 Terminase_GpA PF05876.7 557 2.7e-05 15.5 0.0 1 1 4.5e-07 4.5e-05 14.8 0.0 34 149 25 132 10 136 0.78 # 29453 # 30709 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 4_2 - 341 HTH_10 PF04967.7 53 0.00023 13.7 0.0 1 1 4.4e-06 0.00044 12.8 0.0 24 45 18 39 15 43 0.89 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_9 - 359 Rad51 PF08423.6 256 4.1e-05 15.4 0.0 1 2 5.7e-06 0.00057 11.7 0.0 32 84 45 91 27 135 0.86 # 4919 # 5995 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.546 1_9 - 359 Rad51 PF08423.6 256 4.1e-05 15.4 0.0 2 2 0.0078 0.78 1.4 0.0 169 207 195 230 161 262 0.78 # 4919 # 5995 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.546 1_34 - 520 DEAD PF00270.24 169 1.7e-13 43.3 0.1 1 2 3.1e-13 1e-11 37.5 0.0 2 163 99 268 98 275 0.73 # 23569 # 25128 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.513 1_34 - 520 DEAD PF00270.24 169 1.7e-13 43.3 0.1 2 2 0.014 0.48 2.8 0.0 64 102 384 425 376 428 0.75 # 23569 # 25128 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.513 2_23 - 464 DEAD PF00270.24 169 2.6e-06 19.9 0.1 1 1 2.7e-07 9e-06 18.2 0.1 2 157 35 198 34 201 0.65 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_42 - 419 DEAD PF00270.24 169 0.00021 13.7 0.0 1 1 2.2e-05 0.00075 11.9 0.0 25 132 35 130 14 154 0.76 # 29453 # 30709 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 2_23 - 464 Miro PF08477.8 119 8e-05 16.1 0.2 1 1 2.5e-06 0.00025 14.5 0.1 1 26 51 87 51 181 0.59 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_17 - 207 HTH_31 PF13560.1 64 1.1e-05 18.6 0.5 1 1 3.2e-07 1.1e-05 18.6 0.5 5 38 171 204 170 206 0.92 # 19151 # 19771 # -1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.493 4_2 - 341 HTH_31 PF13560.1 64 2.8e-05 17.2 0.0 1 1 2.1e-06 6.8e-05 16.0 0.0 12 54 15 60 13 61 0.85 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_3 - 129 HTH_31 PF13560.1 64 0.00019 14.6 0.0 1 1 1.1e-05 0.00038 13.6 0.0 16 59 27 70 25 81 0.89 # 2281 # 2667 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 2_23 - 464 DUF2075 PF09848.4 352 2.9e-05 16.0 0.0 1 1 1.7e-06 8.4e-05 14.5 0.0 3 133 51 208 49 245 0.67 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 DUF2075 PF09848.4 352 6.1e-05 15.0 0.2 1 1 3e-06 0.00015 13.7 0.0 3 28 51 76 49 109 0.80 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_42 - 419 Terminase_6 PF03237.10 384 1.1e-20 66.5 0.0 1 1 1.3e-22 1.3e-20 66.3 0.0 4 382 31 403 28 405 0.89 # 29453 # 30709 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_37 - 213 T2SE PF00437.15 272 0.00016 13.5 0.1 1 1 2.9e-06 0.00029 12.7 0.1 116 164 37 85 4 109 0.79 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_17 - 207 HTH_6 PF01418.12 77 0.00013 14.6 0.0 1 1 3e-06 0.0003 13.5 0.0 34 57 180 203 170 205 0.88 # 19151 # 19771 # -1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.493 2_20 - 412 Methyltransf_24 PF13578.1 106 0.00027 14.7 0.1 1 1 1.9e-05 0.0019 12.0 0.1 4 79 130 265 127 281 0.63 # 20796 # 22031 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 2_23 - 464 NACHT PF05729.7 166 1.1e-05 18.0 0.0 1 2 8.6e-06 0.00043 12.9 0.0 1 28 50 77 50 103 0.88 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_23 - 464 NACHT PF05729.7 166 1.1e-05 18.0 0.0 2 2 0.011 0.55 2.8 0.0 79 112 158 188 123 220 0.79 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 NACHT PF05729.7 166 2.5e-05 16.9 0.0 1 1 1.1e-06 5.6e-05 15.8 0.0 2 38 51 88 50 112 0.79 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 UPF0079 PF02367.12 123 3.3e-06 19.7 0.0 1 1 6.3e-08 6.3e-06 18.8 0.0 9 47 43 82 36 96 0.85 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 AAA_17 PF13207.1 121 5.2e-07 23.4 0.0 1 1 8.1e-09 8.1e-07 22.8 0.0 1 33 51 86 51 178 0.81 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_9 - 403 Transposase_mut PF00872.13 381 5.2e-121 396.6 0.1 1 1 5.8e-123 5.8e-121 396.4 0.1 9 379 10 377 1 379 0.97 # 10002 # 11210 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 1_37 - 213 TIGR02211 TIGR02211 221 3e-16 52.2 0.3 1 2 2e-09 1e-07 24.3 0.0 15 51 33 69 18 91 0.89 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 TIGR02211 TIGR02211 221 3e-16 52.2 0.3 2 2 4.8e-10 2.4e-08 26.3 0.1 119 215 102 200 92 204 0.86 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_22 - 639 TIGR02211 TIGR02211 221 0.00039 12.6 0.2 1 1 4.7e-05 0.0023 10.0 0.0 139 217 545 633 518 636 0.79 # 15281 # 17197 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_9 - 359 AAA_25 PF13481.1 194 4e-07 22.5 0.0 1 1 9.3e-08 1.9e-06 20.3 0.0 13 157 27 157 18 216 0.68 # 4919 # 5995 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.546 4_1 - 259 AAA_25 PF13481.1 194 2.5e-05 16.7 0.0 1 1 2.1e-06 4.1e-05 15.9 0.0 22 58 89 126 70 182 0.79 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 1_22 - 639 AAA_25 PF13481.1 194 5.7e-05 15.5 0.3 1 1 1.6e-05 0.00031 13.1 0.0 39 139 39 137 29 143 0.71 # 15281 # 17197 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_37 - 213 AAA_25 PF13481.1 194 0.00019 13.8 0.1 1 2 0.00013 0.0025 10.1 0.0 18 50 30 66 15 88 0.76 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 AAA_25 PF13481.1 194 0.00019 13.8 0.1 2 2 0.058 1.2 1.4 0.1 165 185 162 182 144 186 0.80 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_23 - 464 AAA_25 PF13481.1 194 0.00064 12.0 0.1 1 1 0.00017 0.0034 9.7 0.1 31 59 47 74 24 188 0.73 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 AAA_15 PF13175.1 415 6e-05 15.1 0.0 1 1 7.1e-07 7.1e-05 14.8 0.0 14 56 41 97 10 143 0.79 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_23 - 464 RuvB_N PF05496.7 234 7e-05 14.8 0.0 1 2 4.3e-05 0.0021 10.0 0.0 51 75 50 74 32 104 0.85 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_23 - 464 RuvB_N PF05496.7 234 7e-05 14.8 0.0 2 2 0.018 0.92 1.3 0.0 33 61 305 333 293 366 0.78 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 4_1 - 259 RuvB_N PF05496.7 234 0.00036 12.5 0.0 1 1 1.3e-05 0.00064 11.7 0.0 50 119 101 181 91 189 0.65 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 2_23 - 464 AAA_14 PF13173.1 128 1.3e-07 24.4 0.0 1 2 7.3e-06 0.00024 13.9 0.0 3 48 50 96 48 117 0.75 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_23 - 464 AAA_14 PF13173.1 128 1.3e-07 24.4 0.0 2 2 0.00049 0.016 8.0 0.0 50 97 150 202 127 222 0.80 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 4_1 - 259 AAA_14 PF13173.1 128 1.2e-06 21.4 0.0 1 1 6.7e-08 2.2e-06 20.5 0.0 2 96 101 202 100 220 0.67 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 1_37 - 213 AAA_14 PF13173.1 128 0.00043 13.1 0.0 1 1 3.4e-05 0.0011 11.7 0.0 2 44 49 90 48 122 0.74 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_20 - 412 VirC1 PF07015.6 231 0.00073 11.5 0.0 1 2 0.015 1.5 0.7 0.0 4 26 122 144 120 151 0.83 # 20796 # 22031 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 2_20 - 412 VirC1 PF07015.6 231 0.00073 11.5 0.0 2 2 8.4e-05 0.0084 8.1 0.0 84 154 256 332 243 370 0.69 # 20796 # 22031 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 2_10 - 341 Transposase_20 PF02371.11 87 1.7e-30 98.0 0.2 1 1 3.2e-32 3.2e-30 97.1 0.2 2 80 212 291 211 298 0.92 # 11679 # 12701 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.519 4_2 - 341 HTH_Tnp_ISL3 PF13542.1 52 2.1e-05 16.6 0.1 1 1 1.5e-06 7.7e-05 14.8 0.0 21 49 11 39 2 40 0.82 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_17 - 207 HTH_Tnp_ISL3 PF13542.1 52 0.0003 12.9 0.1 1 1 1.6e-05 0.00078 11.6 0.1 22 48 176 201 174 204 0.83 # 19151 # 19771 # -1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.493 1_33 - 93 GrpE PF01025.14 166 0.00069 12.1 3.3 1 1 7.9e-06 0.00079 11.9 3.3 34 108 12 90 2 92 0.77 # 23288 # 23566 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.466 1_37 - 213 AAA_33 PF13671.1 143 0.00026 13.8 0.1 1 1 4.3e-06 0.00043 13.1 0.1 1 33 51 94 51 208 0.70 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 4_2 - 341 CENP-B_N PF04218.8 53 7e-05 15.2 0.1 1 1 1.3e-06 0.00013 14.3 0.1 20 47 15 42 2 43 0.83 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_1 - 565 DUF2201_N PF13203.1 292 0.015 7.3 0.0 1 1 0.00015 0.015 7.3 0.0 58 99 69 113 64 120 0.87 # 2 # 1696 # -1 # ID=2_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.518 1_37 - 213 ArgK PF03308.11 267 1.6e-05 16.7 0.0 1 1 2.7e-07 2.7e-05 15.9 0.0 26 63 46 83 15 85 0.87 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_22 - 639 SbcCD_C PF13558.1 90 1.1e-07 24.7 0.1 1 1 2.6e-09 2.6e-07 23.5 0.1 12 89 532 601 524 602 0.86 # 15281 # 17197 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 3_3 - 1038 HHH_6 PF14579.1 90 2.1e-16 52.7 0.0 1 1 8.2e-18 8.2e-16 50.8 0.0 1 84 866 958 866 961 0.92 # 2163 # 5276 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.549 2_23 - 464 RNA_helicase PF00910.17 107 4e-05 16.7 0.0 1 2 5e-05 0.0025 10.9 0.0 1 26 52 76 52 106 0.80 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_23 - 464 RNA_helicase PF00910.17 107 4e-05 16.7 0.0 2 2 0.016 0.79 2.9 0.0 45 65 156 176 137 195 0.82 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 RNA_helicase PF00910.17 107 7.3e-05 15.9 0.1 1 1 8.1e-06 0.00041 13.5 0.1 1 26 52 77 52 107 0.76 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_23 - 464 AAA_2 PF07724.9 171 0.00021 14.1 0.0 1 1 1.1e-05 0.0011 11.9 0.0 7 83 53 175 48 193 0.84 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 APS_kinase PF01583.15 157 2.6e-07 23.3 0.0 1 1 5.1e-09 5.1e-07 22.4 0.0 1 40 48 87 48 105 0.84 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_23 - 464 NTPase_1 PF03266.10 168 1.5e-05 17.6 0.1 1 2 0.00011 0.0037 9.9 0.0 1 26 51 76 51 84 0.91 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_23 - 464 NTPase_1 PF03266.10 168 1.5e-05 17.6 0.1 2 2 0.0027 0.09 5.4 0.0 62 103 129 168 114 197 0.82 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_37 - 213 NTPase_1 PF03266.10 168 4e-05 16.3 0.1 1 1 7.1e-06 0.00024 13.8 0.0 2 31 52 81 51 102 0.95 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 4_1 - 259 NTPase_1 PF03266.10 168 0.00023 13.8 0.1 1 2 0.0048 0.16 4.5 0.1 2 30 104 132 103 152 0.83 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 4_1 - 259 NTPase_1 PF03266.10 168 0.00023 13.8 0.1 2 2 0.00073 0.024 7.2 0.0 88 112 156 180 143 203 0.72 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 4_2 - 341 GcrA PF07750.6 162 0.00011 15.3 0.0 1 1 2.4e-06 0.00024 14.2 0.0 6 36 5 34 2 51 0.93 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 4_2 - 341 HTH_26 PF13443.1 63 1.7e-06 21.1 0.0 1 1 3.4e-08 3.4e-06 20.2 0.0 4 41 11 48 10 58 0.90 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_37 - 213 KAP_NTPase PF07693.9 325 2.2e-07 23.0 0.0 1 1 2.7e-09 2.7e-07 22.7 0.0 17 115 46 142 37 202 0.69 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_3 - 188 HTH_17 PF12728.2 51 0.00085 12.5 0.0 1 1 3.1e-05 0.0016 11.7 0.0 5 50 83 135 80 136 0.82 # 958 # 1521 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.511 4_2 - 341 HTH_17 PF12728.2 51 0.0012 12.1 0.9 1 1 5e-05 0.0025 11.0 0.1 6 26 22 43 18 86 0.88 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 4_2 - 341 HTH_11 PF08279.7 55 1.5e-06 20.8 0.1 1 1 3.5e-08 3.5e-06 19.5 0.1 8 37 12 39 5 40 0.80 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_40 - 89 MarR_2 PF12802.2 62 0.0003 13.4 0.0 1 1 5.4e-06 0.00054 12.6 0.0 34 54 38 58 36 72 0.80 # 28347 # 28613 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.524 1_37 - 213 PIF1 PF05970.9 364 4e-05 15.6 0.0 1 1 6.3e-07 6.3e-05 14.9 0.0 18 55 45 82 31 85 0.86 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 4_2 - 341 TrmB PF01978.14 68 0.00026 13.6 0.0 1 1 5.6e-06 0.00056 12.5 0.0 16 44 11 39 10 40 0.93 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_23 - 464 Helicase_RecD PF05127.9 177 4.1e-05 16.2 0.0 1 1 7.2e-07 7.2e-05 15.4 0.0 2 98 54 168 53 175 0.69 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_17 - 207 LacI PF00356.16 46 1.5e-06 20.7 0.0 1 1 4.7e-08 4.7e-06 19.1 0.0 2 22 183 203 182 206 0.87 # 19151 # 19771 # -1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.493 4_2 - 341 DUF1670 PF07900.6 220 0.00097 11.3 0.1 1 1 1.8e-05 0.0018 10.4 0.1 189 219 9 39 4 40 0.92 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_37 - 213 AAA_10 PF12846.2 304 2.3e-06 20.1 0.4 1 2 3.1e-06 0.0001 14.7 0.0 6 47 54 97 51 107 0.82 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_37 - 213 AAA_10 PF12846.2 304 2.3e-06 20.1 0.4 2 2 0.0057 0.19 4.0 0.1 216 260 140 184 95 192 0.78 # 26556 # 27194 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.549 4_1 - 259 AAA_10 PF12846.2 304 7.6e-06 18.4 0.7 1 3 0.084 2.8 0.1 0.0 127 169 37 81 8 94 0.68 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 4_1 - 259 AAA_10 PF12846.2 304 7.6e-06 18.4 0.7 2 3 2.8e-06 9.4e-05 14.8 0.1 1 33 101 133 101 170 0.89 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 4_1 - 259 AAA_10 PF12846.2 304 7.6e-06 18.4 0.7 3 3 0.072 2.4 0.3 0.0 202 247 141 191 133 201 0.68 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 1_22 - 639 AAA_10 PF12846.2 304 0.0094 8.2 6.5 1 2 0.0013 0.042 6.1 1.3 9 24 41 59 39 281 0.88 # 15281 # 17197 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_22 - 639 AAA_10 PF12846.2 304 0.0094 8.2 6.5 2 2 0.0041 0.14 4.4 0.3 97 262 465 617 380 629 0.75 # 15281 # 17197 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 4_2 - 341 HTH_20 PF12840.2 61 0.00038 13.2 0.0 1 1 1.6e-05 0.00082 12.1 0.0 19 46 13 39 10 40 0.89 # 847 # 1869 # -1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_41 - 214 HTH_20 PF12840.2 61 0.00053 12.7 0.0 1 1 4.3e-05 0.0022 10.8 0.0 21 47 25 51 11 58 0.89 # 28809 # 29450 # 1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.556 2_25 - 226 Methyltransf_11 PF08241.7 95 0.00058 13.3 0.0 1 3 0.045 4.5 0.8 0.0 46 65 4 25 2 28 0.77 # 25638 # 26315 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 2_25 - 226 Methyltransf_11 PF08241.7 95 0.00058 13.3 0.0 2 3 0.0023 0.23 5.0 0.0 78 93 53 68 46 70 0.85 # 25638 # 26315 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 2_25 - 226 Methyltransf_11 PF08241.7 95 0.00058 13.3 0.0 3 3 0.0066 0.66 3.5 0.0 5 41 172 207 168 223 0.74 # 25638 # 26315 # 1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.581 2_20 - 412 ArsA_ATPase PF02374.10 305 0.00031 12.7 0.0 1 1 7.9e-06 0.00079 11.4 0.0 4 136 123 265 120 267 0.70 # 20796 # 22031 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 2_20 - 412 AAA_31 PF13614.1 157 1.2e-07 24.7 0.0 1 2 1.6e-05 0.0016 11.3 0.0 2 90 121 214 120 229 0.80 # 20796 # 22031 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 2_20 - 412 AAA_31 PF13614.1 157 1.2e-07 24.7 0.0 2 2 2.7e-05 0.0027 10.5 0.0 109 148 247 285 231 290 0.87 # 20796 # 22031 # 1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 2_23 - 464 TIGR02397 TIGR02397 355 0.00029 12.7 0.0 1 1 8.5e-06 0.00085 11.2 0.0 16 64 31 77 24 96 0.72 # 23384 # 24775 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 2_16 - 314 Yae1_N PF09811.4 39 0.00012 14.6 4.8 1 1 2.1e-06 0.00021 13.7 4.8 8 35 254 281 253 282 0.81 # 18144 # 19085 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.514 1_9 - 359 TIGR02012 TIGR02012 321 1.4e-47 155.2 0.0 1 1 2.5e-49 2.5e-47 154.3 0.0 49 284 45 307 11 329 0.78 # 4919 # 5995 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.546 1_42 - 419 Terminase_3 PF04466.8 387 7.6e-08 24.6 0.0 1 2 2.1e-09 2.1e-07 23.2 0.0 2 123 24 143 23 161 0.91 # 29453 # 30709 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_42 - 419 Terminase_3 PF04466.8 387 7.6e-08 24.6 0.0 2 2 0.08 8 -1.8 0.0 343 385 363 402 340 404 0.64 # 29453 # 30709 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 2_9 - 403 MULE PF10551.4 93 7.3e-15 47.9 0.0 1 1 2.4e-16 2.4e-14 46.3 0.0 16 91 185 260 170 262 0.86 # 10002 # 11210 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 4_1 - 259 IstB_IS21 PF01695.12 178 4.5e-73 237.3 0.1 1 2 0.098 4.9 -0.6 0.0 64 97 24 56 23 60 0.64 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 4_1 - 259 IstB_IS21 PF01695.12 178 4.5e-73 237.3 0.1 2 2 1.9e-74 9.6e-73 236.3 0.1 1 178 55 234 55 234 0.98 # 68 # 844 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.505 1_9 - 359 IstB_IS21 PF01695.12 178 0.00016 14.0 0.0 1 1 7e-06 0.00035 12.9 0.0 52 81 56 85 51 100 0.83 # 4919 # 5995 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.546 2_11 - 106 Glyco_trans_4_3 PF12000.3 171 0.00081 11.9 0.0 1 1 1.9e-05 0.00095 11.7 0.0 17 65 7 56 1 60 0.89 # 12900 # 13217 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.484 2_16 - 314 Glyco_trans_4_3 PF12000.3 171 0.00082 11.9 0.1 1 1 7.5e-05 0.0037 9.8 0.0 10 65 200 256 193 259 0.86 # 18144 # 19085 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.514 1_3 - 188 Phage_AlpA PF05930.7 51 0.00018 14.1 0.0 1 1 3.2e-06 0.00032 13.4 0.0 4 51 80 132 77 132 0.85 # 958 # 1521 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.511 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/5235e624-6e3d-4286-8585-406053455f94 # Target file: checkm_output/bins/pm987/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm987/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/5235e624-6e3d-4286-8585-406053455f94 checkm_output/bins/pm987/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:19:50 2017 # [ok]