# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 234 RepC PF06504.6 283 3.1e-06 14.2 0.1 1 2 2e-06 6e-06 13.2 0.1 134 199 71 138 46 161 0.71 # 857 # 1558 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.423 1_2 - 234 RepC PF06504.6 283 3.1e-06 14.2 0.1 2 2 0.098 0.29 -2.1 0.0 120 146 175 201 148 228 0.56 # 857 # 1558 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.423 1_2 - 234 Rep_3 PF01051.16 222 2.5e-59 188.5 2.6 1 1 9.2e-60 2.8e-59 188.3 2.6 3 222 4 223 2 223 0.94 # 857 # 1558 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.423 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/8c479f37-df70-4f09-b544-2504b6813e38 # Target file: checkm_output/bins/pm953/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm953/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/8c479f37-df70-4f09-b544-2504b6813e38 checkm_output/bins/pm953/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:19:01 2017 # [ok]