# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 144 MarR PF01047.17 59 1.4e-07 20.0 0.1 1 1 1e-07 5e-07 18.2 0.1 8 47 59 100 48 101 0.80 # 18 # 449 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.428 1_1 - 144 HTH_27 PF13463.1 68 8e-07 18.1 0.0 1 1 2.8e-07 1.4e-06 17.4 0.0 22 64 74 114 48 116 0.86 # 18 # 449 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.428 1_2 - 202 Ftsk_gamma PF09397.5 67 1.2e-33 103.4 0.0 1 2 5.2e-05 0.00026 9.4 0.0 9 34 18 43 14 55 0.93 # 872 # 1477 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.347 1_2 - 202 Ftsk_gamma PF09397.5 67 1.2e-33 103.4 0.0 2 2 1.1e-30 5.3e-30 91.7 0.0 3 64 116 177 114 180 0.96 # 872 # 1477 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.347 1_1 - 144 RepL PF05732.6 165 6.1e-07 17.5 0.2 1 1 1.5e-07 7.5e-07 17.2 0.2 16 132 7 131 3 136 0.75 # 18 # 449 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.428 1_2 - 202 FeoC PF09012.5 69 1.4e-06 16.8 0.0 1 2 0.0074 0.037 2.6 0.0 7 29 23 45 18 48 0.82 # 872 # 1477 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.347 1_2 - 202 FeoC PF09012.5 69 1.4e-06 16.8 0.0 2 2 9.4e-06 4.7e-05 11.8 0.0 9 51 129 171 127 182 0.88 # 872 # 1477 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.347 1_2 - 202 HTH_28 PF13518.1 52 2.3e-05 13.2 0.1 1 1 8.9e-06 4.4e-05 12.2 0.1 5 41 125 163 125 173 0.86 # 872 # 1477 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.347 1_1 - 144 HTH_24 PF13412.1 48 2.3e-06 15.7 0.0 1 1 2.1e-06 5.2e-06 14.6 0.0 20 47 73 100 70 101 0.95 # 18 # 449 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.428 1_2 - 202 HTH_24 PF13412.1 48 3.3e-05 12.0 0.3 1 1 2.6e-05 6.5e-05 11.1 0.3 14 48 131 165 126 165 0.89 # 872 # 1477 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.347 1_1 - 144 HTH_36 PF13730.1 55 2.1e-06 16.6 0.0 1 1 1.3e-06 6.4e-06 15.0 0.0 28 55 73 100 46 100 0.78 # 18 # 449 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.428 1_1 - 144 MarR_2 PF12802.2 62 2e-08 22.6 0.0 1 1 6.5e-09 3.2e-08 21.9 0.0 4 51 49 100 46 109 0.89 # 18 # 449 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.428 1_2 - 202 TrmB PF01978.14 68 2.1e-06 16.2 0.1 1 1 1.2e-06 6.2e-06 14.6 0.0 17 55 129 167 125 185 0.84 # 872 # 1477 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.347 1_1 - 144 HTH_Crp_2 PF13545.1 76 1.1e-06 17.1 0.2 1 1 4.4e-07 2.2e-06 16.2 0.1 27 59 69 101 39 115 0.85 # 18 # 449 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.428 1_1 - 144 HTH_20 PF12840.2 61 3.4e-05 12.4 0.0 1 1 2.7e-05 0.00013 10.5 0.0 29 54 75 100 75 108 0.89 # 18 # 449 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.428 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/66c255da-1dae-4b6a-ae05-72a3285b9389 # Target file: checkm_output/bins/pm944/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm944/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/66c255da-1dae-4b6a-ae05-72a3285b9389 checkm_output/bins/pm944/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:18:45 2017 # [ok]