# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_5 - 141 HTH_22 PF13309.1 64 2.4e-05 13.1 0.1 1 1 1e-05 6e-05 11.8 0.1 44 63 5 24 2 25 0.89 # 3508 # 3930 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.418 1_5 - 141 DUF134 PF02001.11 106 1.1e-06 17.5 0.1 1 1 3.1e-07 1.8e-06 16.8 0.1 59 105 5 51 2 52 0.92 # 3508 # 3930 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.418 1_5 - 141 HTH_8 PF02954.14 42 1e-05 14.1 0.0 1 1 3.4e-06 2.1e-05 13.1 0.0 19 37 4 22 2 24 0.89 # 3508 # 3930 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.418 1_2 - 443 AAA_23 PF13476.1 202 0.00031 10.0 5.0 1 1 0.00025 0.0015 7.8 5.0 23 53 59 92 56 438 0.69 # 465 # 1793 # -1 # ID=1_2;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.347 1_2 - 443 SMC_N PF02463.14 220 1.4e-05 13.3 1.7 1 1 5.8e-06 3.5e-05 12.0 1.7 27 83 58 117 41 380 0.82 # 465 # 1793 # -1 # ID=1_2;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.347 1_2 - 443 AAA_21 PF13304.1 303 6.1e-39 123.5 12.1 1 1 2.2e-39 1.3e-38 122.4 12.1 2 302 58 373 57 374 0.79 # 465 # 1793 # -1 # ID=1_2;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.347 1_5 - 141 MerR_1 PF13411.1 69 5.5e-05 11.9 0.1 1 2 0.00012 0.00069 8.4 0.0 2 26 5 29 4 40 0.89 # 3508 # 3930 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.418 1_5 - 141 MerR_1 PF13411.1 69 5.5e-05 11.9 0.1 2 2 0.017 0.1 1.5 0.0 39 55 105 121 71 124 0.85 # 3508 # 3930 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.418 1_5 - 141 NUMOD1 PF07453.8 37 3.4e-07 19.1 0.1 1 1 3.2e-07 1.9e-06 16.7 0.0 18 37 5 24 4 24 0.94 # 3508 # 3930 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.418 1_2 - 443 AAA_29 PF13555.1 62 5e-05 11.8 0.4 1 1 2.5e-05 0.00015 10.3 0.1 24 42 56 74 44 78 0.80 # 465 # 1793 # -1 # ID=1_2;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.347 1_5 - 141 HTH_Tnp_IS630 PF01710.11 120 2.7e-06 16.1 0.0 1 1 6.2e-07 3.7e-06 15.6 0.0 20 62 5 49 2 82 0.88 # 3508 # 3930 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.418 1_5 - 141 HTH_23 PF13384.1 50 4.5e-06 15.3 0.0 1 1 1.7e-06 1e-05 14.1 0.0 18 38 4 24 1 26 0.87 # 3508 # 3930 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.418 1_5 - 141 HTH_7 PF02796.10 45 6.9e-06 14.9 0.3 1 1 3.2e-06 1.9e-05 13.5 0.1 23 43 5 25 4 27 0.89 # 3508 # 3930 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.418 1_5 - 141 HTH_29 PF13551.1 112 3e-05 13.2 0.1 1 1 1.5e-05 8.8e-05 11.7 0.0 12 34 4 25 1 39 0.90 # 3508 # 3930 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.418 1_5 - 141 DUF3853 PF12964.2 96 3.2e-06 15.9 0.1 1 1 9.4e-07 5.7e-06 15.1 0.1 48 90 6 50 3 55 0.86 # 3508 # 3930 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.418 1_5 - 141 HTH_28 PF13518.1 52 1.2e-06 17.4 0.1 1 1 9.7e-07 5.8e-06 15.3 0.0 13 34 4 25 2 29 0.91 # 3508 # 3930 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.418 1_5 - 141 HTH_17 PF12728.2 51 1e-11 33.9 0.0 1 1 3.2e-12 1.9e-11 33.1 0.0 3 43 5 49 4 54 0.83 # 3508 # 3930 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.418 1_5 - 141 Phage_AlpA PF05930.7 51 2.6e-05 12.9 0.0 1 1 7.8e-06 4.7e-05 12.1 0.0 4 28 4 28 1 30 0.88 # 3508 # 3930 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.418 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/13bbbc62-b419-4350-a473-6ac59a61cacd # Target file: checkm_output/bins/pm942/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm942/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/13bbbc62-b419-4350-a473-6ac59a61cacd checkm_output/bins/pm942/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:18:47 2017 # [ok]