# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_19 - 584 KaiC PF06745.8 227 0.00032 13.4 0.1 1 2 0.00022 0.034 6.7 0.0 25 60 14 48 10 112 0.79 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 KaiC PF06745.8 227 0.00032 13.4 0.1 2 2 0.0015 0.23 4.0 0.2 21 48 329 355 320 489 0.82 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 5_4 - 92 Zn_Tnp_IS1 PF03811.8 36 5.3e-17 54.6 1.2 1 1 6.2e-19 9.7e-17 53.8 0.8 1 35 1 35 1 36 0.99 # 2004 # 2279 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 1_19 - 584 ABC_tran PF00005.22 137 6.3e-05 16.8 0.0 1 2 0.02 1 3.2 0.0 15 111 12 111 9 119 0.68 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 ABC_tran PF00005.22 137 6.3e-05 16.8 0.0 2 2 0.00011 0.0058 10.5 0.0 13 45 329 361 322 443 0.78 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 4_1 - 255 ABC_tran PF00005.22 137 0.00011 16.0 0.0 1 1 4.8e-06 0.00025 14.9 0.0 8 36 98 126 95 160 0.84 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_24 - 521 ABC_tran PF00005.22 137 0.00046 14.1 0.0 1 1 2.7e-05 0.0014 12.5 0.0 15 113 28 155 18 161 0.71 # 20638 # 22200 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 4_6 - 153 HTH_22 PF13309.1 64 0.0013 12.1 0.1 1 2 0.011 1.8 2.0 0.0 16 31 54 69 49 82 0.83 # 8048 # 8506 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 4_6 - 153 HTH_22 PF13309.1 64 0.0013 12.1 0.1 2 2 0.00034 0.052 6.9 0.1 41 61 132 152 90 152 0.82 # 8048 # 8506 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 4_1 - 255 DUF815 PF05673.8 250 1.1e-07 24.5 0.0 1 1 9.9e-10 1.5e-07 24.0 0.0 52 124 100 179 64 202 0.76 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 4_13 - 261 HTH_AsnC-type PF13404.1 42 0.0001 15.4 0.9 1 1 1.7e-06 0.00027 14.0 0.2 9 40 161 194 160 194 0.95 # 12630 # 13412 # -1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.470 1_5 - 284 SIS PF01380.17 131 2.1e-19 63.0 0.5 1 1 3.2e-21 5e-19 61.8 0.1 3 128 129 251 127 254 0.94 # 3488 # 4339 # -1 # ID=1_5;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_2 - 342 HHH_5 PF14520.1 60 0.00088 13.0 0.0 1 1 1.5e-05 0.0023 11.7 0.0 9 26 216 232 194 254 0.69 # 912 # 1937 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.516 4_8 - 135 Sigma54_CBD PF04963.8 194 0.00025 14.0 0.0 1 1 2.1e-06 0.00032 13.7 0.0 52 153 27 130 10 134 0.79 # 9718 # 10122 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 3_19 - 278 rve_3 PF13683.1 67 1.1e-33 108.2 0.1 1 1 8.2e-35 2.1e-33 107.2 0.1 1 67 190 256 190 256 0.99 # 11905 # 12738 # -1 # ID=3_19;partial=00;start_type=GTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.542 2_11 - 302 rve_3 PF13683.1 67 3.7e-19 61.6 0.0 1 1 4.8e-20 1.2e-18 59.9 0.0 2 67 216 281 215 281 0.98 # 6273 # 7178 # -1 # ID=2_11;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.550 1_14 - 81 rve_3 PF13683.1 67 2.8e-13 42.8 0.0 1 1 1.3e-14 3.5e-13 42.5 0.0 7 67 1 62 1 62 0.96 # 13446 # 13688 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 4_7 - 346 rve_3 PF13683.1 67 4.7e-11 35.7 0.0 1 1 6.2e-12 1.6e-10 33.9 0.0 6 67 271 334 266 334 0.94 # 8543 # 9580 # 1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.498 4_9 - 426 rve_3 PF13683.1 67 4.4e-09 29.4 0.1 1 1 5.9e-10 1.5e-08 27.6 0.1 5 56 236 290 232 294 0.90 # 10252 # 11529 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.519 4_2 - 500 rve_3 PF13683.1 67 8.8e-05 15.6 0.1 1 1 8.1e-06 0.00021 14.4 0.1 2 55 228 287 227 289 0.89 # 2190 # 3689 # -1 # ID=4_2;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 4_1 - 255 Sigma54_activat PF00158.21 168 0.00059 12.9 0.0 1 1 6.7e-06 0.001 12.1 0.0 12 44 92 123 82 147 0.76 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_9 - 240 TIGR01830 TIGR01830 239 1.7e-28 93.1 0.1 1 1 1.6e-30 2.5e-28 92.6 0.1 2 237 11 235 10 237 0.88 # 8802 # 9521 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_19 - 584 MobB PF03205.9 140 7.6e-07 22.5 0.0 1 2 3.8e-05 0.003 10.8 0.0 3 38 11 45 9 88 0.76 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 MobB PF03205.9 140 7.6e-07 22.5 0.0 2 2 0.00011 0.0084 9.4 0.0 3 49 330 376 328 413 0.82 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_15 - 322 MobB PF03205.9 140 0.0002 14.6 0.2 1 1 4.6e-06 0.00036 13.8 0.2 3 33 67 97 65 113 0.87 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 1_25 - 341 UvrD-helicase PF00580.16 315 3.2e-08 26.7 0.0 1 2 1.2e-05 0.0019 11.0 0.0 16 67 4 47 2 86 0.80 # 22185 # 23207 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_25 - 341 UvrD-helicase PF00580.16 315 3.2e-08 26.7 0.0 2 2 1.9e-06 0.0003 13.6 0.0 242 294 115 170 91 174 0.86 # 22185 # 23207 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_15 - 322 SecA_DEAD PF07517.9 266 0.0019 11.0 0.1 1 1 1.9e-05 0.0029 10.4 0.1 93 127 66 101 58 130 0.89 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 3_6 - 102 HTH_34 PF13601.1 80 1.6e-06 21.6 0.0 1 1 4.5e-08 2.3e-06 21.1 0.0 25 79 39 93 30 94 0.91 # 3165 # 3470 # 1 # ID=3_6;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 3_21 - 156 HTH_34 PF13601.1 80 3.8e-05 17.2 0.1 1 1 1.1e-06 5.9e-05 16.6 0.1 5 66 49 109 46 120 0.94 # 13595 # 14062 # -1 # ID=3_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.504 3_8 - 107 HTH_34 PF13601.1 80 0.00048 13.7 0.0 1 1 1.3e-05 0.00068 13.2 0.0 2 44 16 58 15 64 0.95 # 4383 # 4703 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 3_21 - 156 MarR PF01047.17 59 1.9e-19 62.7 0.2 1 1 8.8e-21 6.9e-19 60.9 0.1 1 59 42 100 42 100 0.99 # 13595 # 14062 # -1 # ID=3_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.504 3_6 - 102 MarR PF01047.17 59 0.00065 13.0 0.0 1 1 1.3e-05 0.001 12.3 0.0 28 53 39 64 32 70 0.87 # 3165 # 3470 # 1 # ID=3_6;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_9 - 240 IlvN PF07991.7 165 0.00099 12.0 0.1 1 1 1.4e-05 0.0021 11.0 0.1 3 52 6 56 4 72 0.82 # 8802 # 9521 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_9 - 240 NAD_binding_7 PF13241.1 103 0.00018 15.3 1.2 1 1 3e-06 0.00046 14.0 0.1 5 66 5 84 2 107 0.62 # 8802 # 9521 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_50 - 412 HTH_8 PF02954.14 42 8.8e-10 31.6 0.2 1 2 0.036 5.6 0.2 0.5 32 41 200 209 199 210 0.91 # 45934 # 47169 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.565 1_50 - 412 HTH_8 PF02954.14 42 8.8e-10 31.6 0.2 2 2 5.6e-12 8.8e-10 31.6 0.2 12 41 346 375 342 376 0.91 # 45934 # 47169 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.565 3_6 - 102 HTH_39 PF14090.1 70 0.00099 12.2 1.5 1 2 0.00086 0.13 5.3 0.0 34 44 30 40 28 44 0.87 # 3165 # 3470 # 1 # ID=3_6;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 3_6 - 102 HTH_39 PF14090.1 70 0.00099 12.2 1.5 2 2 0.00099 0.15 5.1 0.3 10 42 52 80 47 92 0.73 # 3165 # 3470 # 1 # ID=3_6;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_19 - 584 AAA_19 PF13245.1 76 5.2e-10 32.6 0.5 1 2 4.9e-06 0.00026 14.3 0.0 16 50 14 44 6 49 0.89 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 AAA_19 PF13245.1 76 5.2e-10 32.6 0.5 2 2 5.7e-06 0.0003 14.1 0.0 4 36 320 353 318 413 0.84 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_15 - 322 AAA_19 PF13245.1 76 3.8e-05 16.9 2.5 1 2 5.8e-06 0.0003 14.1 0.6 9 52 63 102 55 113 0.79 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 1_15 - 322 AAA_19 PF13245.1 76 3.8e-05 16.9 2.5 2 2 0.061 3.2 1.2 0.0 40 70 186 215 171 220 0.77 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 4_5 - 719 AAA_19 PF13245.1 76 0.00015 15.0 0.0 1 1 1.8e-05 0.00096 12.5 0.0 16 36 208 233 194 267 0.70 # 5478 # 7634 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.498 2_20 - 389 CbiA PF01656.18 195 8e-37 120.0 0.0 1 1 2.1e-38 1.1e-36 119.6 0.0 2 194 110 339 109 340 0.80 # 13695 # 14861 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.502 1_19 - 584 CbiA PF01656.18 195 1.7e-28 92.9 0.0 1 2 2.1e-16 1.1e-14 47.8 0.0 4 161 13 240 10 270 0.70 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 CbiA PF01656.18 195 1.7e-28 92.9 0.0 2 2 6.5e-15 3.4e-13 43.0 0.0 4 157 332 528 329 547 0.72 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_15 - 322 CbiA PF01656.18 195 4.2e-17 55.7 0.0 1 1 1.1e-18 5.6e-17 55.3 0.0 2 113 67 208 66 291 0.70 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 1_19 - 584 KTI12 PF08433.5 270 0.00047 12.9 0.0 1 2 0.0045 0.7 2.5 0.0 4 38 11 45 9 57 0.89 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 KTI12 PF08433.5 270 0.00047 12.9 0.0 2 2 9.8e-05 0.015 7.9 0.0 3 38 329 364 328 387 0.88 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 3_6 - 102 PadR PF03551.9 75 7.4e-21 67.3 0.3 1 1 1.3e-22 1e-20 66.9 0.3 1 74 15 84 15 85 0.96 # 3165 # 3470 # 1 # ID=3_6;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 3_21 - 156 PadR PF03551.9 75 7e-06 19.3 0.1 1 1 1.5e-07 1.2e-05 18.6 0.1 20 70 62 109 58 112 0.84 # 13595 # 14062 # -1 # ID=3_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.504 2_21 - 337 Rep_3 PF01051.16 222 4e-33 108.4 1.9 1 1 4.1e-35 6.4e-33 107.7 1.9 4 214 25 275 22 281 0.85 # 15591 # 16601 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.511 3_21 - 156 HxlR PF01638.12 91 5.7e-07 22.7 0.1 1 1 5.9e-09 9.2e-07 22.0 0.1 8 73 47 112 45 129 0.87 # 13595 # 14062 # -1 # ID=3_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.504 3_19 - 278 rve PF00665.21 120 2.9e-24 79.0 0.0 1 1 6.2e-25 1.1e-23 77.2 0.0 4 120 106 219 103 219 0.93 # 11905 # 12738 # -1 # ID=3_19;partial=00;start_type=GTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.542 2_11 - 302 rve PF00665.21 120 6.9e-24 77.8 0.0 1 1 6.1e-25 1.1e-23 77.2 0.0 4 119 124 243 121 244 0.97 # 6273 # 7178 # -1 # ID=2_11;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.550 4_7 - 346 rve PF00665.21 120 1.3e-20 67.3 0.0 1 1 6.7e-21 1.2e-19 64.2 0.0 4 119 181 294 178 295 0.96 # 8543 # 9580 # 1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.498 3_14 - 187 rve PF00665.21 120 5e-19 62.1 0.0 1 1 4.1e-20 7.1e-19 61.7 0.0 4 107 56 163 53 167 0.97 # 9270 # 9830 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.560 4_2 - 500 rve PF00665.21 120 1.4e-16 54.3 0.0 1 1 1.6e-17 2.7e-16 53.3 0.0 2 120 123 256 122 256 0.94 # 2190 # 3689 # -1 # ID=4_2;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_12 - 198 rve PF00665.21 120 5.8e-14 45.8 0.0 1 1 5e-15 8.7e-14 45.2 0.0 2 77 107 180 106 193 0.92 # 11475 # 12068 # 1 # ID=1_12;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.552 3_3 - 235 rve PF00665.21 120 5.1e-13 42.7 0.1 1 1 5.5e-13 9.5e-12 38.7 0.0 9 119 75 182 70 183 0.89 # 543 # 1247 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 4_9 - 426 rve PF00665.21 120 8.8e-12 38.8 0.1 1 1 6.1e-12 1.1e-10 35.3 0.0 4 119 138 260 135 261 0.81 # 10252 # 11529 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.519 1_14 - 81 rve PF00665.21 120 8.1e-06 19.5 0.0 1 1 7.4e-07 1.3e-05 18.9 0.0 97 120 1 24 1 24 0.96 # 13446 # 13688 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_15 - 322 CTP_synth_N PF06418.9 276 0.00041 13.0 0.2 1 2 4.6e-05 0.0072 8.9 0.1 12 45 73 106 64 111 0.88 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 1_15 - 322 CTP_synth_N PF06418.9 276 0.00041 13.0 0.2 2 2 0.0058 0.91 2.0 0.0 101 150 196 245 169 258 0.83 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 1_19 - 584 YhjQ PF06564.7 244 3.5e-08 26.6 0.1 1 2 1.8e-06 0.00014 14.8 0.0 10 44 16 50 11 148 0.89 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 YhjQ PF06564.7 244 3.5e-08 26.6 0.1 2 2 9.7e-05 0.0076 9.1 0.0 10 49 335 374 328 400 0.84 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_15 - 322 YhjQ PF06564.7 244 0.00071 12.5 0.5 1 1 1.5e-05 0.0012 11.8 0.1 10 40 72 102 64 114 0.83 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 4_1 - 255 AFG1_ATPase PF03969.11 362 1.3e-05 17.6 0.0 1 1 1e-07 1.6e-05 17.4 0.0 25 207 60 242 36 252 0.75 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_24 - 521 AAA_23 PF13476.1 202 3.6e-11 37.3 0.0 1 1 1.8e-12 1.4e-10 35.3 0.0 1 53 6 58 6 144 0.88 # 20638 # 22200 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 1_19 - 584 AAA_23 PF13476.1 202 0.0015 12.4 0.0 1 2 0.053 4.1 1.2 0.1 24 37 13 26 8 38 0.81 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 AAA_23 PF13476.1 202 0.0015 12.4 0.0 2 2 0.00025 0.02 8.7 0.0 18 40 326 348 308 427 0.85 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 AAA_24 PF13479.1 213 0.014 8.5 3.7 1 2 0.009 1.4 1.9 0.4 10 33 15 46 11 146 0.71 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 AAA_24 PF13479.1 213 0.014 8.5 3.7 2 2 0.00035 0.054 6.5 0.2 6 22 330 346 327 352 0.87 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 TIGR00416 TIGR00416 454 8.9e-05 14.5 0.0 1 2 1.2e-05 0.0018 10.2 0.0 99 188 13 102 9 120 0.90 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 TIGR00416 TIGR00416 454 8.9e-05 14.5 0.0 2 2 0.0039 0.61 1.9 0.0 95 121 328 354 322 368 0.86 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 AAA_30 PF13604.1 196 1.4e-06 21.5 0.7 1 2 0.0018 0.093 5.8 0.0 22 54 12 44 3 73 0.86 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 AAA_30 PF13604.1 196 1.4e-06 21.5 0.7 2 2 9.6e-06 0.0005 13.2 0.1 10 54 319 363 316 380 0.88 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 4_1 - 255 AAA_30 PF13604.1 196 1.7e-05 18.0 0.0 1 1 1.1e-06 5.8e-05 16.2 0.0 12 111 96 180 82 194 0.77 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_15 - 322 AAA_30 PF13604.1 196 2.6e-05 17.4 0.3 1 2 2.7e-06 0.00014 15.0 0.1 9 54 55 100 51 133 0.89 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 1_15 - 322 AAA_30 PF13604.1 196 2.6e-05 17.4 0.3 2 2 0.096 5 0.1 0.0 9 57 168 216 166 249 0.79 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 1_24 - 521 SMC_N PF02463.14 220 1.5e-11 37.4 0.0 1 2 1.4e-11 2.2e-09 30.4 0.0 2 70 4 68 3 79 0.85 # 20638 # 22200 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 1_24 - 521 SMC_N PF02463.14 220 1.5e-11 37.4 0.0 2 2 0.00084 0.13 4.9 0.0 160 204 277 320 203 329 0.85 # 20638 # 22200 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 3_20 - 88 HTH_Tnp_1 PF01527.15 76 6.9e-22 70.8 0.1 1 1 4.1e-23 8e-22 70.6 0.1 4 76 2 71 1 71 0.97 # 12762 # 13025 # -1 # ID=3_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.538 3_24 - 135 HTH_Tnp_1 PF01527.15 76 2.7e-18 59.3 0.0 1 1 1.8e-19 3.6e-18 58.9 0.0 2 58 9 72 8 101 0.83 # 16295 # 16699 # 1 # ID=3_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 2_14 - 58 HTH_Tnp_1 PF01527.15 76 2.3e-17 56.3 0.3 1 1 1.2e-18 2.4e-17 56.2 0.3 2 50 8 55 7 57 0.94 # 8494 # 8667 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 4_6 - 153 HTH_Tnp_1 PF01527.15 76 1.3e-16 53.9 0.4 1 3 8.8e-07 1.7e-05 18.3 0.0 8 54 3 49 2 55 0.86 # 8048 # 8506 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 4_6 - 153 HTH_Tnp_1 PF01527.15 76 1.3e-16 53.9 0.4 2 3 1.2e-06 2.3e-05 17.9 0.0 3 47 55 100 53 108 0.91 # 8048 # 8506 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 4_6 - 153 HTH_Tnp_1 PF01527.15 76 1.3e-16 53.9 0.4 3 3 8.2e-06 0.00016 15.2 0.0 5 42 115 152 111 152 0.93 # 8048 # 8506 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 2_17 - 147 HTH_Tnp_1 PF01527.15 76 4.8e-15 48.9 0.0 1 1 3.6e-16 7e-15 48.4 0.0 3 49 11 58 9 85 0.85 # 10744 # 11184 # -1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_11 - 101 HTH_Tnp_1 PF01527.15 76 2.9e-13 43.2 0.6 1 1 1.8e-14 3.6e-13 42.9 0.6 1 76 1 76 1 76 0.94 # 11146 # 11448 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.459 3_13 - 113 HTH_Tnp_1 PF01527.15 76 1.3e-12 41.1 0.0 1 1 9.5e-14 1.9e-12 40.6 0.0 21 58 17 64 14 85 0.80 # 8869 # 9207 # -1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.516 3_3 - 235 HTH_Tnp_1 PF01527.15 76 0.00039 13.9 0.3 1 1 4.3e-05 0.00084 12.9 0.3 4 51 6 58 4 63 0.79 # 543 # 1247 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 5_4 - 92 GerE PF00196.14 58 0.00025 13.9 0.0 1 1 2.4e-06 0.00038 13.3 0.0 10 41 55 86 52 89 0.92 # 2004 # 2279 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 3_3 - 235 DDE_3 PF13358.1 146 0.0011 12.3 0.0 1 1 2.1e-05 0.0032 10.7 0.0 32 90 82 141 59 146 0.87 # 543 # 1247 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 4_1 - 255 Bac_DnaA PF00308.13 219 1.9e-10 34.3 0.0 1 1 1.8e-12 2.7e-10 33.7 0.0 36 137 103 201 78 209 0.88 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_19 - 584 MipZ PF09140.6 261 8.3e-08 25.1 2.2 1 2 7.1e-05 0.0037 9.9 0.0 8 39 15 46 10 63 0.89 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 MipZ PF09140.6 261 8.3e-08 25.1 2.2 2 2 2.1e-05 0.0011 11.6 0.4 6 39 332 365 327 464 0.62 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_15 - 322 MipZ PF09140.6 261 1.1e-07 24.7 1.4 1 2 3.4e-07 1.8e-05 17.5 0.7 3 34 66 97 64 106 0.89 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 1_15 - 322 MipZ PF09140.6 261 1.1e-07 24.7 1.4 2 2 0.0015 0.078 5.5 0.0 32 128 119 220 113 223 0.49 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 2_20 - 389 MipZ PF09140.6 261 6.7e-06 18.8 0.3 1 2 1.1e-05 0.00055 12.6 0.0 2 47 108 153 107 157 0.87 # 13695 # 14861 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.502 2_20 - 389 MipZ PF09140.6 261 6.7e-06 18.8 0.3 2 2 0.0034 0.18 4.3 0.0 88 134 224 270 197 292 0.85 # 13695 # 14861 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.502 6_4 - 207 DDE_Tnp_1 PF01609.16 213 8.3e-25 81.1 0.7 1 1 5.1e-26 9.9e-25 80.8 0.7 4 205 14 185 11 192 0.88 # 3196 # 3816 # -1 # ID=6_4;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.549 6_1 - 207 DDE_Tnp_1 PF01609.16 213 1.2e-24 80.6 0.8 1 1 7e-26 1.4e-24 80.4 0.8 4 205 14 185 11 192 0.88 # 3 # 623 # 1 # ID=6_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.549 2_25 - 305 DDE_Tnp_1 PF01609.16 213 3.9e-23 75.6 0.8 1 1 3e-24 5.9e-23 75.0 0.8 4 204 130 300 127 303 0.90 # 18318 # 19232 # 1 # ID=2_25;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.536 4_16 - 181 DDE_Tnp_1 PF01609.16 213 3e-21 69.4 1.1 1 1 1.9e-22 3.8e-21 69.1 1.1 19 205 4 159 2 166 0.89 # 16182 # 16724 # -1 # ID=4_16;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.552 3_26 - 160 DDE_Tnp_1 PF01609.16 213 4.3e-18 59.1 0.1 1 1 2.6e-19 5e-18 58.9 0.1 38 205 2 138 1 145 0.89 # 17307 # 17786 # 1 # ID=3_26;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.544 3_18 - 157 DDE_Tnp_1 PF01609.16 213 1.2e-14 47.8 0.1 1 1 7.9e-16 1.5e-14 47.5 0.1 43 207 4 137 1 142 0.84 # 11333 # 11803 # 1 # ID=3_18;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.546 1_1 - 205 DDE_Tnp_1 PF01609.16 213 6.4e-11 35.7 0.0 1 1 5.1e-12 9.9e-11 35.1 0.0 4 73 130 199 127 204 0.87 # 3 # 617 # -1 # ID=1_1;partial=10;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.509 3_17 - 173 DDE_Tnp_1 PF01609.16 213 8.5e-05 15.7 0.0 1 1 7.3e-06 0.00014 14.9 0.0 4 44 130 171 127 172 0.84 # 10837 # 11355 # 1 # ID=3_17;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.526 1_24 - 521 AAA_21 PF13304.1 303 1.5e-14 48.1 0.0 1 2 7e-07 0.00011 15.8 0.0 2 24 27 49 27 78 0.83 # 20638 # 22200 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 1_24 - 521 AAA_21 PF13304.1 303 1.5e-14 48.1 0.0 2 2 3.3e-11 5.2e-09 30.0 0.1 258 301 274 317 222 319 0.86 # 20638 # 22200 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 4_8 - 135 Sigma70_r4 PF04545.11 50 0.00038 13.3 1.1 1 2 2.4e-06 0.00038 13.3 1.1 13 43 19 50 7 53 0.79 # 9718 # 10122 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 4_8 - 135 Sigma70_r4 PF04545.11 50 0.00038 13.3 1.1 2 2 0.035 5.4 0.0 0.1 32 39 108 115 106 118 0.83 # 9718 # 10122 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 4_5 - 719 AAA PF00004.24 132 4.1e-07 23.8 0.2 1 2 4.1e-05 0.0016 12.2 0.0 1 13 205 217 205 232 0.86 # 5478 # 7634 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.498 4_5 - 719 AAA PF00004.24 132 4.1e-07 23.8 0.2 2 2 0.00037 0.014 9.1 0.0 58 127 499 581 469 585 0.85 # 5478 # 7634 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.498 4_1 - 255 AAA PF00004.24 132 5.7e-06 20.1 0.0 1 1 3.2e-07 1.2e-05 19.0 0.0 1 74 104 178 104 225 0.74 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_19 - 584 AAA PF00004.24 132 1.2e-05 19.1 0.1 1 2 0.017 0.65 3.7 0.0 2 21 12 31 11 65 0.79 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 AAA PF00004.24 132 1.2e-05 19.1 0.1 2 2 2.3e-05 0.00091 13.0 0.0 1 22 330 351 330 477 0.87 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_15 - 322 AAA PF00004.24 132 0.00041 14.1 1.5 1 1 5.7e-05 0.0022 11.7 1.5 2 25 68 91 67 254 0.66 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 4_8 - 135 Rrf2 PF02082.15 83 2.2e-06 21.3 0.1 1 1 6.1e-08 4.7e-06 20.2 0.1 21 73 23 78 10 85 0.81 # 9718 # 10122 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 5_8 - 470 Rrf2 PF02082.15 83 0.00059 13.5 0.0 1 1 3.3e-05 0.0026 11.4 0.0 29 72 44 86 33 93 0.83 # 4359 # 5768 # 1 # ID=5_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.507 3_21 - 156 HTH_27 PF13463.1 68 6.1e-15 48.9 0.8 1 1 1.5e-16 1.2e-14 48.0 0.3 1 68 42 108 42 108 0.99 # 13595 # 14062 # -1 # ID=3_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.504 1_21 - 117 HTH_27 PF13463.1 68 0.0011 12.8 0.0 1 1 2.2e-05 0.0017 12.2 0.0 25 66 36 74 21 75 0.86 # 19221 # 19571 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.536 1_19 - 584 TIGR00064 TIGR00064 279 4.7e-07 22.5 0.1 1 2 0.0002 0.016 7.6 0.0 82 116 11 45 3 54 0.89 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 TIGR00064 TIGR00064 279 4.7e-07 22.5 0.1 2 2 7.8e-06 0.0006 12.3 0.0 78 116 326 364 305 389 0.89 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_15 - 322 TIGR00064 TIGR00064 279 0.00037 13.0 0.6 1 1 9.7e-06 0.00076 12.0 0.3 81 116 66 101 44 105 0.85 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 4_7 - 346 rve_2 PF13333.1 52 2.3e-15 50.0 0.1 1 1 4.4e-17 2.3e-15 50.0 0.1 1 50 285 340 285 341 0.91 # 8543 # 9580 # 1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.498 1_14 - 81 rve_2 PF13333.1 52 3.2e-09 30.3 0.0 1 1 7.5e-11 3.9e-09 30.1 0.0 1 50 14 68 14 70 0.87 # 13446 # 13688 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 3_19 - 278 rve_2 PF13333.1 52 1.2e-05 18.8 0.0 1 1 6.4e-07 3.3e-05 17.5 0.0 1 47 209 259 209 261 0.96 # 11905 # 12738 # -1 # ID=3_19;partial=00;start_type=GTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.542 2_20 - 389 MerR_1 PF13411.1 69 0.00017 14.9 0.0 1 1 3.3e-06 0.00051 13.4 0.0 2 35 41 75 40 104 0.79 # 13695 # 14861 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.502 1_19 - 584 AAA_16 PF13191.1 185 2.6e-09 30.8 1.1 1 2 3.3e-06 0.00013 15.5 0.2 23 141 7 96 3 268 0.84 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 AAA_16 PF13191.1 185 2.6e-09 30.8 1.1 2 2 3.1e-05 0.0012 12.3 0.0 16 81 319 383 314 461 0.61 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 4_1 - 255 AAA_16 PF13191.1 185 2.3e-05 18.0 3.2 1 2 8.8e-06 0.00034 14.1 0.1 22 46 99 123 82 139 0.80 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 4_1 - 255 AAA_16 PF13191.1 185 2.3e-05 18.0 3.2 2 2 0.015 0.58 3.6 0.1 132 165 142 177 135 199 0.61 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_15 - 322 AAA_16 PF13191.1 185 8.4e-05 16.1 0.5 1 1 3.4e-06 0.00013 15.5 0.5 11 63 51 103 47 280 0.87 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 4_5 - 719 AAA_16 PF13191.1 185 0.00035 14.1 0.0 1 1 6.9e-05 0.0027 11.2 0.0 18 42 196 220 188 327 0.81 # 5478 # 7634 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.498 4_1 - 255 AAA_22 PF13401.1 131 2.3e-05 18.1 0.6 1 2 0.00018 0.0069 10.1 0.0 5 26 102 123 98 137 0.86 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 4_1 - 255 AAA_22 PF13401.1 131 2.3e-05 18.1 0.6 2 2 0.0039 0.15 5.7 0.1 70 112 144 192 127 206 0.68 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_19 - 584 AAA_22 PF13401.1 131 6.1e-05 16.7 0.2 1 2 0.024 0.95 3.2 0.0 8 67 12 66 9 131 0.75 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 AAA_22 PF13401.1 131 6.1e-05 16.7 0.2 2 2 0.00019 0.0073 10.0 0.1 3 29 326 352 323 451 0.61 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_25 - 341 AAA_22 PF13401.1 131 0.00012 15.8 0.0 1 1 1.4e-05 0.00056 13.6 0.0 8 111 5 155 4 167 0.77 # 22185 # 23207 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 4_5 - 719 AAA_22 PF13401.1 131 0.00014 15.6 0.0 1 2 0.0003 0.012 9.3 0.0 5 20 203 218 197 314 0.63 # 5478 # 7634 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.498 4_5 - 719 AAA_22 PF13401.1 131 0.00014 15.6 0.0 2 2 0.019 0.75 3.5 0.0 85 112 494 524 454 540 0.62 # 5478 # 7634 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.498 1_19 - 584 Thymidylate_kin PF02223.12 186 3.5e-07 23.3 0.1 1 2 8.1e-05 0.0063 9.4 0.0 3 47 15 59 13 76 0.86 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 Thymidylate_kin PF02223.12 186 3.5e-07 23.3 0.1 2 2 4.6e-05 0.0036 10.2 0.0 5 54 336 384 333 401 0.84 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_15 - 322 Thymidylate_kin PF02223.12 186 0.0011 11.8 0.0 1 1 3.4e-05 0.0027 10.6 0.0 5 38 73 106 71 129 0.80 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 4_1 - 255 TIGR00362 TIGR00362 437 4.1e-12 39.0 0.0 1 1 3.1e-14 4.8e-12 38.8 0.0 102 241 64 202 10 210 0.84 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 4_13 - 261 HTH_AraC PF00165.18 42 6.8e-19 60.7 0.0 1 2 5.8e-11 4.5e-09 29.5 0.0 1 41 164 204 164 205 0.94 # 12630 # 13412 # -1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.470 4_13 - 261 HTH_AraC PF00165.18 42 6.8e-19 60.7 0.0 2 2 1.3e-10 9.8e-09 28.4 0.0 3 41 214 253 213 254 0.96 # 12630 # 13412 # -1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.470 2_20 - 389 HTH_AraC PF00165.18 42 0.0014 12.1 0.0 1 1 3.6e-05 0.0028 11.1 0.0 4 26 35 57 33 62 0.81 # 13695 # 14861 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.502 1_24 - 521 AAA_29 PF13555.1 62 2.4e-07 23.8 0.0 1 1 8.8e-09 4.6e-07 22.9 0.0 2 49 5 50 4 57 0.81 # 20638 # 22200 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 4_1 - 255 AAA_29 PF13555.1 62 3.4e-05 16.9 0.0 1 1 1.4e-06 7.2e-05 15.9 0.0 21 56 99 135 90 139 0.79 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_19 - 584 AAA_29 PF13555.1 62 5.7e-05 16.2 0.5 1 2 0.008 0.41 3.8 0.0 27 42 12 27 5 40 0.83 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 AAA_29 PF13555.1 62 5.7e-05 16.2 0.5 2 2 0.0001 0.0053 9.9 0.2 23 45 328 349 317 355 0.82 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 6_3 - 317 HTH_1 PF00126.22 60 3.5e-23 74.7 0.3 1 1 2e-24 7.8e-23 73.6 0.3 2 60 11 69 10 69 0.97 # 2163 # 3113 # -1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.514 1_48 - 307 HTH_1 PF00126.22 60 4.1e-20 64.9 0.2 1 1 2.2e-21 8.8e-20 63.8 0.2 2 59 12 69 11 70 0.96 # 43288 # 44208 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.526 1_10 - 301 HTH_1 PF00126.22 60 1.6e-19 63.0 0.3 1 1 8e-21 3.1e-19 62.1 0.3 2 59 7 64 6 65 0.97 # 9814 # 10716 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.476 1_50 - 412 HTH_1 PF00126.22 60 8.5e-08 25.4 0.1 1 1 1.9e-08 7.4e-07 22.4 0.1 4 41 342 380 339 398 0.81 # 45934 # 47169 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.565 1_6 - 457 Gln-synt_C PF00120.19 259 2.4e-60 197.3 0.0 1 1 3e-62 4.6e-60 196.4 0.0 3 257 120 362 118 364 0.95 # 4511 # 5881 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.549 1_11 - 101 LZ_Tnp_IS481 PF13011.1 85 9.8e-06 19.4 0.1 1 1 2.1e-07 1.6e-05 18.8 0.1 20 52 17 49 14 73 0.88 # 11146 # 11448 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.459 4_8 - 135 LZ_Tnp_IS481 PF13011.1 85 9.8e-05 16.2 0.1 1 1 1.8e-06 0.00014 15.7 0.1 3 61 3 63 1 87 0.84 # 9718 # 10122 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 1_9 - 240 adh_short_C2 PF13561.1 241 4.1e-27 89.0 0.1 1 1 9.1e-29 4.7e-27 88.8 0.1 5 239 16 235 13 237 0.91 # 8802 # 9521 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_19 - 584 adh_short_C2 PF13561.1 241 0.00011 15.5 0.0 1 2 0.00026 0.014 8.7 0.0 1 47 18 61 17 130 0.66 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 adh_short_C2 PF13561.1 241 0.00011 15.5 0.0 2 2 0.0044 0.23 4.7 0.0 5 45 340 381 336 476 0.75 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 2_13 - 323 adh_short_C2 PF13561.1 241 0.00075 12.8 0.1 1 1 3.4e-05 0.0018 11.6 0.1 7 77 60 204 57 233 0.85 # 7516 # 8484 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.534 3_21 - 156 B-block_TFIIIC PF04182.7 75 0.00037 13.9 0.0 1 1 3.2e-06 0.0005 13.5 0.0 16 54 56 94 46 133 0.81 # 13595 # 14062 # -1 # ID=3_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.504 1_19 - 584 SRP54 PF00448.17 196 3e-10 33.4 0.7 1 2 1.1e-05 0.00083 12.3 0.0 3 38 10 45 8 53 0.92 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 SRP54 PF00448.17 196 3e-10 33.4 0.7 2 2 2.1e-07 1.6e-05 17.9 0.0 3 38 329 364 327 401 0.92 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_15 - 322 SRP54 PF00448.17 196 3.6e-06 20.1 1.4 1 2 3.6e-07 2.8e-05 17.2 1.1 3 38 66 101 64 104 0.94 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 1_15 - 322 SRP54 PF00448.17 196 3.6e-06 20.1 1.4 2 2 0.039 3 0.7 0.0 72 92 165 186 147 211 0.76 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 1_60 - 402 Mnd1 PF03962.10 188 0.063 6.4 9.5 1 1 0.00074 0.12 5.6 9.5 67 142 33 109 9 114 0.75 # 54333 # 55538 # -1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.589 1_9 - 240 adh_short PF00106.20 167 7.3e-18 58.6 1.2 1 1 1.3e-19 1e-17 58.1 1.2 2 166 9 162 8 163 0.90 # 8802 # 9521 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_47 - 56 adh_short PF00106.20 167 2.1e-06 21.3 0.1 1 1 2.8e-08 2.2e-06 21.2 0.1 3 23 7 27 5 37 0.89 # 43038 # 43205 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.464 4_8 - 135 HTH_32 PF13565.1 77 8.3e-13 42.6 2.9 1 1 2.2e-14 8.6e-13 42.5 0.8 3 76 45 116 43 117 0.81 # 9718 # 10122 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 4_9 - 426 HTH_32 PF13565.1 77 6.4e-11 36.5 0.2 1 1 1.6e-12 6.4e-11 36.5 0.2 2 77 40 113 39 113 0.80 # 10252 # 11529 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.519 3_3 - 235 HTH_32 PF13565.1 77 2e-06 22.1 0.2 1 1 2.3e-07 8.8e-06 20.0 0.0 26 76 5 50 2 51 0.83 # 543 # 1247 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 3_19 - 278 HTH_32 PF13565.1 77 2.9e-05 18.4 5.9 1 2 1.6e-06 6.3e-05 17.3 1.1 14 76 18 77 10 78 0.73 # 11905 # 12738 # -1 # ID=3_19;partial=00;start_type=GTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.542 3_19 - 278 HTH_32 PF13565.1 77 2.9e-05 18.4 5.9 2 2 0.021 0.84 4.1 0.2 8 60 76 122 72 130 0.54 # 11905 # 12738 # -1 # ID=3_19;partial=00;start_type=GTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.542 5_8 - 470 GntR PF00392.16 64 5.1e-12 38.7 0.0 1 1 7.6e-14 1.2e-11 37.5 0.0 6 64 22 80 19 80 0.96 # 4359 # 5768 # 1 # ID=5_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.507 3_16 - 140 HTH_3 PF01381.17 55 9e-12 38.3 0.0 1 1 2.7e-13 2.1e-11 37.1 0.0 1 55 85 138 85 138 0.96 # 10271 # 10690 # 1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.490 4_2 - 500 HTH_3 PF01381.17 55 0.00052 13.4 0.3 1 1 2.2e-05 0.0017 11.8 0.3 6 32 16 41 12 46 0.87 # 2190 # 3689 # -1 # ID=4_2;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_9 - 240 Epimerase PF01370.16 236 7.8e-11 35.3 0.1 1 1 8.5e-13 1.3e-10 34.6 0.1 1 115 10 131 10 140 0.85 # 8802 # 9521 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 4_8 - 135 HTH_23 PF13384.1 50 2.5e-08 27.0 0.2 1 1 2.1e-09 2.5e-08 27.0 0.2 2 49 11 59 10 60 0.93 # 9718 # 10122 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 5_4 - 92 HTH_23 PF13384.1 50 2.7e-08 26.8 0.0 1 1 3.1e-09 3.7e-08 26.4 0.0 3 43 49 89 47 91 0.92 # 2004 # 2279 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 3_20 - 88 HTH_23 PF13384.1 50 8e-08 25.4 0.6 1 1 1.5e-08 1.8e-07 24.2 0.1 9 45 12 46 6 51 0.88 # 12762 # 13025 # -1 # ID=3_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.538 4_9 - 426 HTH_23 PF13384.1 50 4.5e-07 23.0 1.3 1 1 1.7e-07 2e-06 20.9 0.3 3 48 8 54 6 56 0.87 # 10252 # 11529 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.519 2_14 - 58 HTH_23 PF13384.1 50 9.2e-07 22.0 0.1 1 1 9.3e-08 1.1e-06 21.7 0.1 3 42 14 54 12 57 0.94 # 8494 # 8667 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_11 - 101 HTH_23 PF13384.1 50 2.2e-06 20.8 0.0 1 1 8.7e-07 1e-05 18.6 0.0 7 43 12 48 7 56 0.82 # 11146 # 11448 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.459 4_13 - 261 HTH_23 PF13384.1 50 7.1e-06 19.2 0.0 1 2 0.0033 0.039 7.3 0.0 17 45 171 197 160 199 0.79 # 12630 # 13412 # -1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.470 4_13 - 261 HTH_23 PF13384.1 50 7.1e-06 19.2 0.0 2 2 0.00085 0.01 9.1 0.0 7 41 206 244 202 258 0.76 # 12630 # 13412 # -1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.470 3_3 - 235 HTH_23 PF13384.1 50 9.5e-06 18.8 0.7 1 1 2.4e-05 0.00029 14.0 0.1 28 42 41 55 40 62 0.87 # 543 # 1247 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 4_6 - 153 HTH_23 PF13384.1 50 1.8e-05 17.9 4.5 1 2 0.00044 0.0053 10.0 0.4 2 45 2 47 1 51 0.89 # 8048 # 8506 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 4_6 - 153 HTH_23 PF13384.1 50 1.8e-05 17.9 4.5 2 2 0.0013 0.016 8.5 0.0 5 35 120 151 118 152 0.88 # 8048 # 8506 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 2_17 - 147 HTH_23 PF13384.1 50 3.7e-05 16.9 0.1 1 1 5e-06 6e-05 16.2 0.1 7 45 20 59 16 64 0.90 # 10744 # 11184 # -1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 3_24 - 135 HTH_23 PF13384.1 50 0.00042 13.5 0.0 1 1 5.6e-05 0.00067 12.9 0.0 7 44 19 57 14 62 0.85 # 16295 # 16699 # 1 # ID=3_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 1_50 - 412 HTH_23 PF13384.1 50 0.00074 12.8 0.1 1 1 6.1e-05 0.00074 12.8 0.1 13 40 348 375 345 379 0.83 # 45934 # 47169 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.565 4_2 - 500 HTH_23 PF13384.1 50 0.0023 11.2 3.4 1 1 0.0005 0.006 9.9 0.1 11 38 10 39 2 48 0.81 # 2190 # 3689 # -1 # ID=4_2;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_19 - 584 Fer4_NifH PF00142.13 273 3.7e-13 42.8 0.1 1 2 6e-09 4.7e-07 22.7 0.0 5 43 13 51 10 70 0.87 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 Fer4_NifH PF00142.13 273 3.7e-13 42.8 0.1 2 2 3e-07 2.4e-05 17.2 0.0 3 62 330 388 329 406 0.77 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_15 - 322 Fer4_NifH PF00142.13 273 4e-06 19.7 0.0 1 1 8.6e-08 6.7e-06 18.9 0.0 5 43 69 107 66 131 0.87 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 5_4 - 92 HTH_7 PF02796.10 45 0.00091 12.7 0.0 1 1 1.4e-05 0.0021 11.5 0.0 9 43 51 85 46 87 0.85 # 2004 # 2279 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 3_16 - 140 HTH_19 PF12844.2 64 4.6e-12 39.4 0.1 1 2 0.047 7.3 0.3 0.0 26 40 55 67 40 78 0.54 # 10271 # 10690 # 1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.490 3_16 - 140 HTH_19 PF12844.2 64 4.6e-12 39.4 0.1 2 2 1.8e-13 2.8e-11 36.9 0.0 3 59 84 139 82 139 0.97 # 10271 # 10690 # 1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.490 1_19 - 584 NB-ARC PF00931.17 287 1.1e-06 21.2 0.0 1 2 0.0037 0.29 3.4 0.0 22 36 11 25 5 34 0.87 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 NB-ARC PF00931.17 287 1.1e-06 21.2 0.0 2 2 8.6e-07 6.7e-05 15.3 0.0 17 51 325 358 315 401 0.79 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_15 - 322 NB-ARC PF00931.17 287 0.00011 14.6 0.2 1 1 2.3e-06 0.00018 13.9 0.2 7 40 54 85 50 94 0.82 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 1_19 - 584 Mg_chelatase PF01078.16 207 0.0006 12.5 0.5 1 2 0.045 7 -0.8 0.0 25 52 11 38 10 67 0.70 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 Mg_chelatase PF01078.16 207 0.0006 12.5 0.5 2 2 2.7e-05 0.0042 9.8 0.1 22 59 326 364 319 393 0.75 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 3_6 - 102 FeoC PF09012.5 69 0.00066 13.0 0.0 1 1 6.5e-06 0.001 12.4 0.0 24 51 38 65 30 74 0.81 # 3165 # 3470 # 1 # ID=3_6;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_9 - 240 NAD_binding_10 PF13460.1 183 1.7e-09 31.5 0.4 1 1 2.7e-11 2.1e-09 31.1 0.4 1 146 10 177 10 205 0.77 # 8802 # 9521 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_47 - 56 NAD_binding_10 PF13460.1 183 0.00029 14.4 0.1 1 1 4.1e-06 0.00032 14.2 0.1 1 21 7 27 7 34 0.93 # 43038 # 43205 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.464 4_8 - 135 HTH_29 PF13551.1 112 3.3e-16 53.0 1.6 1 1 1.6e-17 4.1e-16 52.7 1.6 7 108 23 117 16 121 0.82 # 9718 # 10122 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 4_9 - 426 HTH_29 PF13551.1 112 9.7e-16 51.5 2.2 1 1 9.4e-17 2.5e-15 50.2 0.4 15 111 26 116 12 117 0.85 # 10252 # 11529 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.519 3_20 - 88 HTH_29 PF13551.1 112 3.2e-06 20.9 0.1 1 1 1.5e-07 3.9e-06 20.5 0.1 4 37 13 45 11 85 0.81 # 12762 # 13025 # -1 # ID=3_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.538 1_11 - 101 HTH_29 PF13551.1 112 0.00015 15.4 0.1 1 1 8.5e-06 0.00022 14.9 0.1 6 46 17 56 12 86 0.75 # 11146 # 11448 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.459 2_17 - 147 HTH_29 PF13551.1 112 0.0003 14.5 0.1 1 1 1.8e-05 0.00046 13.9 0.1 4 40 23 59 20 69 0.83 # 10744 # 11184 # -1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 4_6 - 153 HTH_29 PF13551.1 112 0.00039 14.1 0.6 1 2 0.00081 0.021 8.5 0.1 1 67 7 73 7 105 0.63 # 8048 # 8506 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 4_6 - 153 HTH_29 PF13551.1 112 0.00039 14.1 0.6 2 2 0.011 0.27 5.0 0.1 44 96 107 144 83 152 0.64 # 8048 # 8506 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 1_15 - 322 Glyco_trans_4_4 PF13579.1 160 0.00077 13.2 3.2 1 2 5.2e-06 0.00081 13.1 0.7 2 37 76 112 73 225 0.74 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 1_15 - 322 Glyco_trans_4_4 PF13579.1 160 0.00077 13.2 3.2 2 2 0.072 11 -0.4 0.2 45 45 255 255 203 307 0.51 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 1_19 - 584 CobA_CobO_BtuR PF02572.10 172 0.0033 10.6 4.5 1 2 0.0026 0.4 3.8 0.0 9 37 13 42 8 43 0.86 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 CobA_CobO_BtuR PF02572.10 172 0.0033 10.6 4.5 2 2 0.00032 0.049 6.8 0.6 2 36 326 360 325 362 0.90 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 2_15 - 531 DDE_Tnp_IS66 PF03050.9 271 1.3e-101 332.8 2.2 1 1 6.6e-103 2.6e-101 331.9 0.0 1 271 189 480 189 480 0.98 # 8774 # 10366 # -1 # ID=2_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.572 1_60 - 402 DDE_Tnp_IS66 PF03050.9 271 1.9e-67 220.8 0.1 1 1 4.9e-69 1.9e-67 220.8 0.1 1 191 189 400 189 401 0.97 # 54333 # 55538 # -1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.589 1_59 - 119 DDE_Tnp_IS66 PF03050.9 271 2.6e-23 76.1 0.0 1 1 7.7e-25 3e-23 75.9 0.0 206 271 3 68 1 68 0.96 # 53946 # 54302 # -1 # ID=1_59;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.541 3_3 - 235 DDE_Tnp_IS66 PF03050.9 271 3.6e-12 39.5 0.3 1 1 1.2e-13 4.6e-12 39.2 0.3 5 132 10 144 6 174 0.87 # 543 # 1247 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_8 - 441 TIGR00508 TIGR00508 419 1.6e-60 198.0 0.0 1 1 1.3e-62 2e-60 197.7 0.0 14 416 31 421 24 424 0.87 # 7413 # 8735 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.556 3_22 - 274 ETF PF01012.16 164 5.1e-05 16.6 0.0 1 1 6.8e-07 0.00011 15.5 0.0 66 109 61 105 59 121 0.88 # 14213 # 15034 # 1 # ID=3_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_15 - 322 AdoHcyase_NAD PF00670.16 162 0.00078 12.8 0.0 1 1 1.2e-05 0.0018 11.7 0.0 20 73 60 123 52 131 0.66 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 4_1 - 255 Arch_ATPase PF01637.13 234 8.6e-05 15.8 0.1 1 2 6.9e-05 0.0054 9.9 0.0 14 59 97 140 88 151 0.81 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 4_1 - 255 Arch_ATPase PF01637.13 234 8.6e-05 15.8 0.1 2 2 0.0036 0.28 4.3 0.1 103 153 150 193 138 202 0.65 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_19 - 584 Arch_ATPase PF01637.13 234 0.0012 12.1 0.0 1 2 0.026 2 1.5 0.0 23 60 11 48 4 148 0.63 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 Arch_ATPase PF01637.13 234 0.0012 12.1 0.0 2 2 0.00026 0.02 8.1 0.0 15 55 322 362 314 470 0.59 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 PhoH PF02562.11 205 2.4e-08 27.0 0.6 1 2 9.2e-06 0.00072 12.3 0.1 22 63 11 52 2 110 0.88 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 PhoH PF02562.11 205 2.4e-08 27.0 0.6 2 2 1.3e-05 0.001 11.8 0.0 15 45 321 353 309 375 0.82 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_15 - 322 PhoH PF02562.11 205 2.7e-05 17.0 0.1 1 1 1.3e-06 0.0001 15.1 0.1 18 76 63 122 52 128 0.79 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 4_5 - 719 AAA_5 PF07728.9 139 2.5e-16 53.2 0.0 1 3 0.00017 0.013 8.7 0.0 1 33 204 236 204 246 0.80 # 5478 # 7634 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.498 4_5 - 719 AAA_5 PF07728.9 139 2.5e-16 53.2 0.0 2 3 0.077 6 0.1 0.0 11 48 239 277 238 287 0.84 # 5478 # 7634 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.498 4_5 - 719 AAA_5 PF07728.9 139 2.5e-16 53.2 0.0 3 3 3e-14 2.4e-12 40.3 0.0 59 139 493 578 466 578 0.76 # 5478 # 7634 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.498 1_19 - 584 AAA_5 PF07728.9 139 0.00031 14.0 0.0 1 2 0.018 1.4 2.2 0.0 2 31 11 43 10 151 0.84 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 AAA_5 PF07728.9 139 0.00031 14.0 0.0 2 2 0.00011 0.0085 9.4 0.0 2 41 330 369 329 430 0.77 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 TIGR00763 TIGR00763 795 0.0017 10.0 0.1 1 2 0.0024 0.37 2.3 0.0 356 375 11 30 5 40 0.81 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 TIGR00763 TIGR00763 795 0.0017 10.0 0.1 2 2 0.00025 0.039 5.5 0.0 355 377 329 351 317 360 0.82 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 ResIII PF04851.10 184 0.00053 13.4 0.0 1 2 0.0015 0.23 4.8 0.0 30 56 13 42 3 60 0.83 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 ResIII PF04851.10 184 0.00053 13.4 0.0 2 2 0.00062 0.097 6.0 0.0 24 50 326 352 254 364 0.81 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 TIGR01968 TIGR01968 261 2.8e-13 43.0 2.0 1 2 1.9e-08 9.9e-07 21.5 0.1 8 39 14 45 11 51 0.94 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 TIGR01968 TIGR01968 261 2.8e-13 43.0 2.0 2 2 5.5e-08 2.8e-06 20.0 0.2 5 37 330 362 326 368 0.87 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_15 - 322 TIGR01968 TIGR01968 261 3.9e-10 32.7 1.5 1 1 1.4e-11 7.1e-10 31.8 1.5 4 39 66 101 63 107 0.91 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 2_20 - 389 TIGR01968 TIGR01968 261 6.2e-08 25.5 0.1 1 2 7.8e-06 0.0004 13.0 0.0 3 37 108 142 106 145 0.93 # 13695 # 14861 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.502 2_20 - 389 TIGR01968 TIGR01968 261 6.2e-08 25.5 0.1 2 2 4.3e-05 0.0022 10.5 0.0 104 145 227 268 215 341 0.79 # 13695 # 14861 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.502 1_19 - 584 AAA_18 PF13238.1 129 0.00027 14.8 1.4 1 2 0.0054 0.84 3.5 0.0 2 19 12 29 11 58 0.78 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 AAA_18 PF13238.1 129 0.00027 14.8 1.4 2 2 7.5e-05 0.012 9.5 0.1 1 24 330 358 330 453 0.77 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_24 - 521 TIGR00611 TIGR00611 365 4.1e-08 25.9 1.8 1 3 1.1e-09 1.7e-07 23.9 0.0 3 56 4 57 2 76 0.92 # 20638 # 22200 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 1_24 - 521 TIGR00611 TIGR00611 365 4.1e-08 25.9 1.8 2 3 0.02 3.1 -0.0 0.2 302 345 275 318 262 329 0.66 # 20638 # 22200 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 1_24 - 521 TIGR00611 TIGR00611 365 4.1e-08 25.9 1.8 3 3 0.071 11 -1.8 0.1 154 173 409 429 402 499 0.72 # 20638 # 22200 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 1_2 - 342 IMS_HHH PF11798.3 32 0.00084 13.0 0.1 1 1 1.3e-05 0.0021 11.7 0.1 13 27 214 228 212 233 0.85 # 912 # 1937 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.516 5_4 - 92 HTH_Tnp_IS1 PF12759.2 46 3.3e-26 84.0 0.0 1 1 3e-28 4.6e-26 83.6 0.0 1 46 43 88 43 88 0.97 # 2004 # 2279 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 1_19 - 584 DUF258 PF03193.11 161 0.00014 14.6 0.0 1 2 0.0046 0.36 3.5 0.0 38 52 11 25 3 123 0.89 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 DUF258 PF03193.11 161 0.00014 14.6 0.0 2 2 0.00012 0.0095 8.7 0.0 35 58 327 350 305 396 0.82 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 4_1 - 255 DUF258 PF03193.11 161 0.00088 12.0 0.0 1 1 1.8e-05 0.0014 11.3 0.0 15 57 80 123 70 152 0.83 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 4_8 - 135 HTH_28 PF13518.1 52 1.6e-13 44.0 1.3 1 1 2.7e-14 3.2e-13 43.0 0.4 2 51 16 66 15 68 0.94 # 9718 # 10122 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 4_9 - 426 HTH_28 PF13518.1 52 5.3e-09 29.5 4.1 1 2 1.5e-08 1.8e-07 24.7 0.4 2 51 12 63 11 64 0.88 # 10252 # 11529 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.519 4_9 - 426 HTH_28 PF13518.1 52 5.3e-09 29.5 4.1 2 2 0.013 0.16 5.7 0.2 17 51 95 127 90 128 0.74 # 10252 # 11529 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.519 3_20 - 88 HTH_28 PF13518.1 52 5.5e-09 29.5 0.1 1 1 6.5e-10 7.8e-09 29.0 0.1 5 37 13 45 9 57 0.92 # 12762 # 13025 # -1 # ID=3_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.538 4_6 - 153 HTH_28 PF13518.1 52 7.4e-08 25.9 5.4 1 3 1.1e-05 0.00013 15.5 0.6 2 47 7 56 6 61 0.82 # 8048 # 8506 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 4_6 - 153 HTH_28 PF13518.1 52 7.4e-08 25.9 5.4 2 3 0.044 0.53 4.0 0.0 1 22 63 85 63 100 0.67 # 8048 # 8506 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 4_6 - 153 HTH_28 PF13518.1 52 7.4e-08 25.9 5.4 3 3 0.0037 0.044 7.4 0.1 4 31 124 152 121 152 0.84 # 8048 # 8506 # 1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519 2_14 - 58 HTH_28 PF13518.1 52 8.8e-08 25.6 0.6 1 1 1.6e-08 1.9e-07 24.6 0.0 1 38 17 55 17 56 0.96 # 8494 # 8667 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 2_17 - 147 HTH_28 PF13518.1 52 3.8e-07 23.6 0.1 1 1 5e-08 6e-07 23.0 0.1 1 41 19 60 19 65 0.93 # 10744 # 11184 # -1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_11 - 101 HTH_28 PF13518.1 52 2.8e-06 20.9 0.0 1 1 3.6e-07 4.3e-06 20.2 0.0 1 38 10 48 10 58 0.88 # 11146 # 11448 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.459 3_24 - 135 HTH_28 PF13518.1 52 5e-06 20.0 0.0 1 1 6.7e-07 8e-06 19.4 0.0 1 39 18 57 18 63 0.91 # 16295 # 16699 # 1 # ID=3_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 5_4 - 92 HTH_28 PF13518.1 52 2.4e-05 17.8 0.0 1 1 3.8e-06 4.6e-05 17.0 0.0 5 39 56 90 54 91 0.91 # 2004 # 2279 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 3_3 - 235 HTH_28 PF13518.1 52 9.1e-05 16.0 1.2 1 1 3.3e-05 0.0004 14.0 1.2 22 36 40 54 13 55 0.76 # 543 # 1247 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_50 - 412 HTH_28 PF13518.1 52 0.00013 15.5 0.3 1 1 9.6e-05 0.0012 12.5 0.1 9 37 349 377 343 380 0.85 # 45934 # 47169 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.565 3_13 - 113 HTH_28 PF13518.1 52 0.0012 12.4 0.0 1 1 0.00016 0.0019 11.8 0.0 14 39 21 46 19 56 0.90 # 8869 # 9207 # -1 # ID=3_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.516 3_19 - 278 HTH_28 PF13518.1 52 0.033 7.8 7.8 1 1 0.0012 0.015 8.9 0.1 11 30 8 27 4 32 0.84 # 11905 # 12738 # -1 # ID=3_19;partial=00;start_type=GTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.542 1_19 - 584 TIGR00041 TIGR00041 196 2.1e-05 17.5 0.0 1 2 0.00077 0.12 5.2 0.0 6 53 10 57 8 71 0.84 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 TIGR00041 TIGR00041 196 2.1e-05 17.5 0.0 2 2 3.3e-05 0.0052 9.7 0.0 6 56 329 379 325 398 0.80 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 3_6 - 102 HTH_12 PF08461.5 66 1.6e-05 18.1 0.1 1 1 1.4e-07 2.2e-05 17.7 0.1 5 57 14 68 10 82 0.85 # 3165 # 3470 # 1 # ID=3_6;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_9 - 240 Shikimate_DH PF01488.15 135 1.2e-05 18.9 0.0 1 1 1.3e-07 2e-05 18.3 0.0 8 99 3 102 1 112 0.74 # 8802 # 9521 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 2_18 - 82 MerR-DNA-bind PF09278.6 65 0.01 9.8 5.9 1 3 0.0056 0.87 3.6 0.1 10 17 8 15 6 16 0.88 # 12390 # 12635 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.577 2_18 - 82 MerR-DNA-bind PF09278.6 65 0.01 9.8 5.9 2 3 0.0056 0.87 3.6 0.1 10 17 22 29 20 30 0.88 # 12390 # 12635 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.577 2_18 - 82 MerR-DNA-bind PF09278.6 65 0.01 9.8 5.9 3 3 0.0056 0.87 3.6 0.1 10 17 36 43 34 44 0.88 # 12390 # 12635 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.577 3_21 - 156 HTH_24 PF13412.1 48 0.00031 13.7 0.0 1 1 1.7e-05 0.00066 12.6 0.0 15 48 56 89 46 89 0.89 # 13595 # 14062 # -1 # ID=3_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.504 5_4 - 92 HTH_24 PF13412.1 48 0.00064 12.7 0.0 1 1 3e-05 0.0012 11.8 0.0 21 40 67 86 62 86 0.92 # 2004 # 2279 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 4_8 - 135 HTH_24 PF13412.1 48 0.00071 12.5 0.4 1 1 7.6e-05 0.003 10.5 0.2 17 45 27 55 15 55 0.89 # 9718 # 10122 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 3_19 - 278 HTH_24 PF13412.1 48 0.0012 11.8 0.0 1 1 7.5e-05 0.0029 10.6 0.0 14 36 6 28 1 32 0.87 # 11905 # 12738 # -1 # ID=3_19;partial=00;start_type=GTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.542 1_19 - 584 AAA_26 PF13500.1 199 0.0074 9.4 3.2 1 4 0.024 3.7 0.6 0.1 11 31 18 38 11 44 0.80 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 AAA_26 PF13500.1 199 0.0074 9.4 3.2 2 4 0.0011 0.16 5.0 0.0 131 179 200 250 192 269 0.78 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 AAA_26 PF13500.1 199 0.0074 9.4 3.2 3 4 0.086 13 -1.2 0.1 11 25 337 351 330 360 0.77 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 AAA_26 PF13500.1 199 0.0074 9.4 3.2 4 4 0.019 3 0.9 0.0 129 180 490 557 467 576 0.60 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 4_13 - 261 HTH_18 PF12833.2 81 2.9e-23 75.4 0.6 1 1 7.7e-25 6e-23 74.4 0.4 2 79 178 253 177 255 0.97 # 12630 # 13412 # -1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.470 4_8 - 135 HTH_18 PF12833.2 81 0.00031 14.4 0.6 1 1 8.1e-06 0.00063 13.4 0.2 2 40 34 72 33 86 0.84 # 9718 # 10122 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 1_50 - 412 HTH_30 PF13556.1 59 4.5e-20 64.6 0.3 1 2 0.053 4.1 0.7 0.1 26 35 200 209 195 210 0.86 # 45934 # 47169 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.565 1_50 - 412 HTH_30 PF13556.1 59 4.5e-20 64.6 0.3 2 2 5.8e-22 4.5e-20 64.6 0.3 1 58 341 398 341 399 0.97 # 45934 # 47169 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.565 6_3 - 317 HTH_30 PF13556.1 59 0.00021 14.4 0.2 1 1 7.6e-06 0.00059 13.0 0.0 11 42 21 52 14 64 0.91 # 2163 # 3113 # -1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.514 3_6 - 102 FUR PF01475.14 120 0.00018 15.0 0.0 1 1 1.3e-06 0.0002 14.8 0.0 29 91 29 92 12 100 0.78 # 3165 # 3470 # 1 # ID=3_6;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_50 - 412 HTH_10 PF04967.7 53 0.0014 11.8 0.1 1 1 3.7e-05 0.0058 9.8 0.0 30 49 359 378 354 380 0.93 # 45934 # 47169 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.565 4_8 - 135 HTH_33 PF13592.1 60 0.00074 12.6 0.3 1 2 0.025 4 0.7 0.1 21 33 38 50 36 52 0.88 # 9718 # 10122 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 4_8 - 135 HTH_33 PF13592.1 60 0.00074 12.6 0.3 2 2 4.7e-05 0.0073 9.4 0.0 7 31 93 117 90 119 0.91 # 9718 # 10122 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 1_19 - 584 LpxK PF02606.9 326 0.0015 11.1 1.2 1 2 0.0013 0.2 4.0 0.1 46 72 17 43 15 49 0.96 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 LpxK PF02606.9 326 0.0015 11.1 1.2 2 2 0.00042 0.066 5.6 0.1 46 69 336 359 333 362 0.92 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 4_2 - 500 HTH_31 PF13560.1 64 3.7e-05 17.4 1.1 1 1 2.2e-06 0.00017 15.3 1.1 11 40 15 44 11 53 0.89 # 2190 # 3689 # -1 # ID=4_2;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 2_20 - 389 HTH_31 PF13560.1 64 0.00014 15.6 0.6 1 1 4.9e-06 0.00038 14.2 0.3 12 45 37 69 32 90 0.82 # 13695 # 14861 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.502 1_25 - 341 UvrD_C_2 PF13538.1 104 1.7e-06 21.7 0.0 1 1 2.3e-08 3.7e-06 20.6 0.0 33 104 243 330 222 330 0.75 # 22185 # 23207 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 2_21 - 337 HTH_36 PF13730.1 55 0.00012 15.8 0.1 1 1 3.7e-06 0.00057 13.6 0.0 6 55 212 265 210 265 0.90 # 15591 # 16601 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.511 1_19 - 584 T2SE PF00437.15 272 0.00032 13.1 0.0 1 2 0.0086 1.3 1.3 0.0 131 162 11 42 3 50 0.82 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 T2SE PF00437.15 272 0.00032 13.1 0.0 2 2 3.2e-05 0.005 9.2 0.0 124 154 325 353 190 372 0.85 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_5 - 284 HTH_6 PF01418.12 77 4.5e-18 58.4 0.1 1 2 2.1e-19 3.3e-17 55.6 0.0 3 76 2 75 1 76 0.97 # 3488 # 4339 # -1 # ID=1_5;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 1_5 - 284 HTH_6 PF01418.12 77 4.5e-18 58.4 0.1 2 2 0.059 9.3 -0.3 0.1 15 42 90 117 85 124 0.82 # 3488 # 4339 # -1 # ID=1_5;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 4_1 - 255 NACHT PF05729.7 166 6e-06 19.5 0.7 1 3 0.037 1.9 1.6 0.0 18 70 17 73 15 93 0.78 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 4_1 - 255 NACHT PF05729.7 166 6e-06 19.5 0.7 2 3 9.6e-05 0.005 10.0 0.3 3 27 104 128 102 153 0.80 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 4_1 - 255 NACHT PF05729.7 166 6e-06 19.5 0.7 3 3 0.0032 0.17 5.1 0.0 76 128 150 203 134 220 0.73 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_19 - 584 NACHT PF05729.7 166 0.00035 13.8 3.2 1 2 0.037 1.9 1.6 0.1 3 26 11 34 10 42 0.79 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 NACHT PF05729.7 166 0.00035 13.8 3.2 2 2 4.5e-05 0.0023 11.1 0.6 2 27 329 354 328 460 0.92 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_15 - 322 NACHT PF05729.7 166 0.0014 11.8 0.2 1 1 9.8e-05 0.0051 10.0 0.2 3 28 67 92 65 104 0.88 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 1_19 - 584 AAA_17 PF13207.1 121 9.8e-06 20.0 1.0 1 2 0.049 3.8 1.9 1.0 3 18 12 27 11 45 0.86 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 AAA_17 PF13207.1 121 9.8e-06 20.0 1.0 2 2 7.5e-06 0.00059 14.2 0.0 2 35 330 363 329 449 0.56 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 4_1 - 255 AAA_17 PF13207.1 121 6.3e-05 17.4 0.0 1 1 1.7e-06 0.00013 16.3 0.0 2 78 104 175 103 234 0.64 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 5_14 - 86 Transposase_mut PF00872.13 381 1.8e-14 46.5 0.1 1 1 1.2e-16 1.9e-14 46.5 0.1 328 379 9 60 1 62 0.94 # 10200 # 10457 # 1 # ID=5_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.481 1_19 - 584 AAA_25 PF13481.1 194 1.9e-10 34.0 2.9 1 2 3e-05 0.0012 11.8 0.2 37 80 12 45 10 126 0.83 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 AAA_25 PF13481.1 194 1.9e-10 34.0 2.9 2 2 3.3e-08 1.3e-06 21.5 0.2 25 151 318 449 294 471 0.57 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_15 - 322 AAA_25 PF13481.1 194 6.4e-08 25.7 0.5 1 1 3.4e-09 1.3e-07 24.7 0.4 11 151 40 186 31 234 0.65 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 4_1 - 255 AAA_25 PF13481.1 194 4.7e-06 19.6 0.2 1 1 2.9e-07 1.2e-05 18.4 0.1 28 60 96 129 71 194 0.78 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 4_5 - 719 AAA_25 PF13481.1 194 1.4e-05 18.1 0.1 1 1 4.6e-06 0.00018 14.5 0.0 34 65 203 234 176 259 0.83 # 5478 # 7634 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.498 1_25 - 341 Viral_helicase1 PF01443.13 234 5.9e-11 35.8 0.3 1 2 4.9e-07 7.6e-05 15.8 0.0 2 30 5 38 4 54 0.72 # 22185 # 23207 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_25 - 341 Viral_helicase1 PF01443.13 234 5.9e-11 35.8 0.3 2 2 2.1e-07 3.3e-05 17.0 0.5 63 233 133 330 125 331 0.66 # 22185 # 23207 # 1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 1_24 - 521 AAA_15 PF13175.1 415 7.2e-19 61.6 0.1 1 2 2.4e-10 3.7e-08 26.3 0.0 2 45 5 47 4 64 0.90 # 20638 # 22200 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 1_24 - 521 AAA_15 PF13175.1 415 7.2e-19 61.6 0.1 2 2 1.7e-12 2.6e-10 33.3 0.1 315 414 219 317 177 318 0.72 # 20638 # 22200 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 1_19 - 584 RuvB_N PF05496.7 234 1.4e-07 24.3 0.3 1 2 0.041 3.2 0.2 0.0 53 74 11 32 5 46 0.82 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 RuvB_N PF05496.7 234 1.4e-07 24.3 0.3 2 2 2.1e-08 1.6e-06 20.8 0.0 53 119 330 400 320 407 0.87 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 4_1 - 255 RuvB_N PF05496.7 234 0.00011 14.9 0.0 1 1 2.1e-06 0.00017 14.2 0.0 50 115 101 176 71 188 0.72 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 2_20 - 389 VirC1 PF07015.6 231 8.8e-05 15.2 0.0 1 2 0.00084 0.044 6.3 0.0 4 42 109 147 107 154 0.91 # 13695 # 14861 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.502 2_20 - 389 VirC1 PF07015.6 231 8.8e-05 15.2 0.0 2 2 0.00078 0.04 6.5 0.0 84 139 235 290 220 316 0.77 # 13695 # 14861 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.502 1_19 - 584 VirC1 PF07015.6 231 0.00023 13.8 0.5 1 2 0.00049 0.026 7.1 0.0 10 41 16 47 11 66 0.85 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 VirC1 PF07015.6 231 0.00023 13.8 0.5 2 2 0.0033 0.17 4.4 0.1 10 43 335 368 329 379 0.87 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_15 - 322 VirC1 PF07015.6 231 0.00067 12.3 0.1 1 1 2.4e-05 0.0012 11.4 0.1 9 42 71 104 65 111 0.87 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 3_21 - 156 Penicillinase_R PF03965.11 115 0.00028 14.5 0.1 1 1 3.2e-06 0.0005 13.7 0.1 7 56 48 93 42 142 0.92 # 13595 # 14062 # -1 # ID=3_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.504 1_2 - 342 Transposase_20 PF02371.11 87 4.4e-30 97.2 0.2 1 1 2.4e-31 9.3e-30 96.2 0.2 1 79 211 289 211 297 0.93 # 912 # 1937 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.516 3_11 - 335 Transposase_20 PF02371.11 87 1.7e-24 79.3 0.2 1 1 9.3e-26 3.6e-24 78.3 0.2 2 78 210 286 209 296 0.94 # 6650 # 7654 # 1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.482 2_13 - 323 Transposase_20 PF02371.11 87 1.7e-24 79.3 0.9 1 1 1e-25 4e-24 78.1 0.4 1 86 195 278 195 279 0.97 # 7516 # 8484 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.534 1_13 - 359 Transposase_20 PF02371.11 87 5.8e-14 45.6 0.1 1 1 3.1e-15 1.2e-13 44.5 0.1 9 86 238 315 232 316 0.93 # 12287 # 13363 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.484 2_20 - 389 MerR PF00376.18 38 4.4e-07 23.0 0.0 1 1 6.5e-09 1e-06 21.8 0.0 1 29 41 69 41 75 0.91 # 13695 # 14861 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.502 1_19 - 584 AAA_33 PF13671.1 143 0.00044 13.7 0.2 1 1 4.6e-05 0.0036 10.7 0.2 1 41 329 377 329 474 0.69 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_15 - 322 AAA_33 PF13671.1 143 0.0015 12.0 0.5 1 1 2.9e-05 0.0023 11.4 0.5 1 32 66 101 66 235 0.70 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 2_14 - 58 CENP-B_N PF04218.8 53 3.3e-06 20.0 0.0 1 1 2.4e-08 3.8e-06 19.8 0.0 8 49 14 56 8 57 0.82 # 8494 # 8667 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_2 - 342 HHH PF00633.18 30 0.00027 14.2 0.5 1 1 4.1e-06 0.00063 13.0 0.5 15 29 216 230 214 231 0.88 # 912 # 1937 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.516 1_19 - 584 ArgK PF03308.11 267 3.3e-07 22.8 0.5 1 2 4.6e-06 0.00036 12.9 0.1 34 71 13 50 9 63 0.93 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 ArgK PF03308.11 267 3.3e-07 22.8 0.5 2 2 0.00016 0.013 7.8 0.1 32 71 330 369 315 389 0.88 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_15 - 322 ArgK PF03308.11 267 1.6e-06 20.6 0.2 1 1 6.9e-08 5.4e-06 18.8 0.1 18 71 55 106 42 134 0.80 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 1_5 - 284 DUF2529 PF10740.4 172 0.00081 12.4 0.2 1 1 1e-05 0.0016 11.4 0.1 62 143 162 239 116 254 0.81 # 3488 # 4339 # -1 # ID=1_5;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508 4_1 - 255 RNA_helicase PF00910.17 107 2.8e-05 17.8 0.0 1 1 1.2e-06 9.1e-05 16.2 0.0 1 74 104 188 104 191 0.78 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_19 - 584 RNA_helicase PF00910.17 107 0.00053 13.7 0.1 1 2 0.025 1.9 2.3 0.0 2 23 12 33 11 51 0.79 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 RNA_helicase PF00910.17 107 0.00053 13.7 0.1 2 2 0.0002 0.016 9.0 0.0 1 25 330 354 330 376 0.86 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 Gtr1_RagA PF04670.7 232 0.0008 12.1 0.6 1 2 0.017 2.6 0.6 0.1 2 16 11 25 10 30 0.88 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 Gtr1_RagA PF04670.7 232 0.0008 12.1 0.6 2 2 6.5e-05 0.01 8.5 0.1 2 19 330 347 329 363 0.91 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_9 - 240 Eno-Rase_NADH_b PF12242.3 78 3.8e-07 23.4 0.1 1 2 4.6e-08 7.2e-06 19.3 0.1 40 62 8 29 2 43 0.78 # 8802 # 9521 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_9 - 240 Eno-Rase_NADH_b PF12242.3 78 3.8e-07 23.4 0.1 2 2 0.017 2.7 1.5 0.0 15 47 204 235 197 237 0.84 # 8802 # 9521 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_19 - 584 APS_kinase PF01583.15 157 2.9e-07 23.8 0.1 1 2 1.4e-05 0.0011 12.2 0.0 5 37 11 43 8 51 0.90 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 APS_kinase PF01583.15 157 2.9e-07 23.8 0.1 2 2 0.00013 0.01 9.0 0.0 5 37 330 362 327 387 0.85 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 4_1 - 255 APS_kinase PF01583.15 157 0.0014 11.8 0.3 1 2 0.0001 0.0079 9.4 0.0 4 45 103 144 100 153 0.83 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 4_1 - 255 APS_kinase PF01583.15 157 0.0014 11.8 0.3 2 2 0.093 7.3 -0.2 0.0 32 76 154 198 137 208 0.72 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_19 - 584 NTPase_1 PF03266.10 168 7.6e-06 19.2 2.2 1 3 0.00059 0.092 6.0 0.1 2 30 11 39 10 52 0.86 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 NTPase_1 PF03266.10 168 7.6e-06 19.2 2.2 2 3 0.017 2.7 1.2 0.0 107 159 179 229 173 238 0.70 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 NTPase_1 PF03266.10 168 7.6e-06 19.2 2.2 3 3 3.4e-05 0.0053 10.0 0.1 2 30 330 358 329 362 0.92 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_53 - 168 DDE_Tnp_IS1 PF03400.8 131 9.9e-76 245.7 1.5 1 1 2.3e-77 1.2e-75 245.4 1.5 1 131 37 167 37 167 0.99 # 48942 # 49445 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.538 1_46 - 168 DDE_Tnp_IS1 PF03400.8 131 6e-75 243.1 1.1 1 1 1.4e-76 7.3e-75 242.9 1.1 1 131 37 167 37 167 0.99 # 42600 # 43103 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.546 5_3 - 88 DDE_Tnp_IS1 PF03400.8 131 1.7e-37 122.0 1.3 1 1 3.5e-39 1.8e-37 121.9 1.3 46 130 2 86 1 87 0.98 # 1582 # 1845 # -1 # ID=5_3;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.477 2_13 - 323 Glyco_transf_28 PF03033.15 139 6.6e-06 19.5 1.0 1 1 9.5e-08 1.5e-05 18.3 1.0 16 121 63 153 62 158 0.88 # 7516 # 8484 # 1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.534 1_32 - 175 Trans_reg_C PF00486.23 77 3.6e-27 87.7 0.0 1 1 8.8e-29 6.8e-27 86.8 0.0 1 77 94 169 94 169 0.95 # 27492 # 28016 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=3-4bp;gc_cont=0.545 1_56 - 227 Trans_reg_C PF00486.23 77 2.4e-26 85.0 0.4 1 1 8.1e-28 6.3e-26 83.7 0.0 1 77 146 221 146 221 0.97 # 51019 # 51699 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.517 1_19 - 584 ATP_bind_1 PF03029.12 238 7.2e-05 15.9 2.8 1 2 0.0011 0.084 5.9 0.1 2 37 14 49 13 53 0.91 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 ATP_bind_1 PF03029.12 238 7.2e-05 15.9 2.8 2 2 0.0001 0.0078 9.3 0.1 2 37 333 368 332 371 0.94 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_15 - 322 ATP_bind_1 PF03029.12 238 0.00068 12.7 0.2 1 1 1.5e-05 0.0012 11.9 0.2 2 41 70 108 69 113 0.92 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 3_3 - 235 DDE_Tnp_IS240 PF13610.1 140 1.2e-52 171.2 0.0 1 1 4.2e-54 1.6e-52 170.7 0.0 4 139 75 212 73 213 0.99 # 543 # 1247 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 5_14 - 86 DDE_Tnp_IS240 PF13610.1 140 0.00051 13.6 0.1 1 1 1.5e-05 0.0006 13.3 0.1 89 127 11 49 2 70 0.88 # 10200 # 10457 # 1 # ID=5_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.481 1_12 - 198 DDE_Tnp_IS240 PF13610.1 140 0.0012 12.3 0.0 1 1 4.6e-05 0.0018 11.8 0.0 2 61 112 171 111 190 0.87 # 11475 # 12068 # 1 # ID=1_12;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.552 3_19 - 278 DDE_Tnp_IS240 PF13610.1 140 0.0015 12.1 0.0 1 1 5.4e-05 0.0021 11.6 0.0 59 139 167 248 152 249 0.76 # 11905 # 12738 # -1 # ID=3_19;partial=00;start_type=GTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.542 3_20 - 88 HTH_26 PF13443.1 63 5e-05 17.0 0.4 1 2 1.2e-05 0.00064 13.5 0.0 7 33 17 43 15 59 0.87 # 12762 # 13025 # -1 # ID=3_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.538 3_20 - 88 HTH_26 PF13443.1 63 5e-05 17.0 0.4 2 2 0.066 3.4 1.5 0.4 1 20 64 83 64 86 0.85 # 12762 # 13025 # -1 # ID=3_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.538 3_16 - 140 HTH_26 PF13443.1 63 0.00076 13.2 0.0 1 1 2.5e-05 0.0013 12.5 0.0 2 55 85 136 84 138 0.94 # 10271 # 10690 # 1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.490 2_29 - 148 HTH_26 PF13443.1 63 0.0016 12.2 0.0 1 1 5.9e-05 0.0031 11.3 0.0 10 37 51 78 43 98 0.83 # 21077 # 21520 # -1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.511 1_24 - 521 TIGR00634 TIGR00634 563 0.00035 12.7 0.1 1 1 4.3e-06 0.00068 11.8 0.0 1 46 3 48 3 70 0.93 # 20638 # 22200 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 4_9 - 426 HTH_17 PF12728.2 51 0.00055 13.8 0.4 1 2 0.0001 0.016 9.1 0.0 5 23 27 45 26 71 0.78 # 10252 # 11529 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.519 4_9 - 426 HTH_17 PF12728.2 51 0.00055 13.8 0.4 2 2 0.015 2.4 2.1 0.1 7 27 96 118 91 139 0.64 # 10252 # 11529 # -1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.519 5_4 - 92 Zn-ribbon_8 PF09723.5 42 0.0013 12.2 1.0 1 2 0.0019 0.3 4.7 0.1 27 35 6 14 2 19 0.80 # 2004 # 2279 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 5_4 - 92 Zn-ribbon_8 PF09723.5 42 0.0013 12.2 1.0 2 2 0.00065 0.1 6.2 0.1 6 22 30 46 29 54 0.78 # 2004 # 2279 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 1_47 - 56 Ldh_1_N PF00056.18 141 5.1e-05 16.7 0.0 1 1 3.3e-07 5.1e-05 16.7 0.0 1 32 5 36 5 52 0.89 # 43038 # 43205 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.464 5_4 - 92 Zn_Tnp_IS1595 PF12760.2 46 1.6e-05 18.2 0.8 1 1 2.2e-07 3.5e-05 17.1 0.8 19 45 6 37 3 38 0.73 # 2004 # 2279 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 1_50 - 412 HTH_11 PF08279.7 55 4.3e-05 16.7 0.3 1 1 8.2e-06 0.00043 13.5 0.0 22 46 359 384 342 386 0.86 # 45934 # 47169 # 1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.565 4_13 - 261 HTH_11 PF08279.7 55 0.00028 14.1 0.1 1 1 2.9e-05 0.0015 11.7 0.0 4 36 159 192 156 194 0.89 # 12630 # 13412 # -1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.470 3_20 - 88 HTH_11 PF08279.7 55 0.00086 12.5 0.0 1 1 8.9e-05 0.0046 10.2 0.0 3 31 8 36 7 39 0.91 # 12762 # 13025 # -1 # ID=3_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.538 2_25 - 305 DDE_Tnp_1_5 PF13737.1 112 3.1e-47 152.9 0.0 1 1 8.9e-48 2e-46 150.3 0.0 1 112 34 145 34 145 0.96 # 18318 # 19232 # 1 # ID=2_25;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.536 3_17 - 173 DDE_Tnp_1_5 PF13737.1 112 4.1e-47 152.5 0.0 1 1 3.5e-48 7.7e-47 151.7 0.0 1 112 34 145 34 145 0.96 # 10837 # 11355 # 1 # ID=3_17;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.526 1_1 - 205 DDE_Tnp_1_5 PF13737.1 112 5.5e-47 152.1 0.1 1 1 6.2e-48 1.4e-46 150.8 0.0 1 112 34 145 34 145 0.96 # 3 # 617 # -1 # ID=1_1;partial=10;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.509 7_1 - 66 DDE_Tnp_1_5 PF13737.1 112 3.8e-16 52.8 0.0 1 1 2.1e-17 4.7e-16 52.5 0.0 1 41 26 66 26 66 0.96 # 2 # 199 # -1 # ID=7_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.510 3_27 - 56 DDE_Tnp_1_5 PF13737.1 112 5.1e-16 52.4 0.1 1 1 2.8e-17 6.2e-16 52.1 0.1 1 40 17 56 17 56 0.97 # 17951 # 18118 # 1 # ID=3_27;partial=01;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.482 6_1 - 207 DDE_Tnp_1_5 PF13737.1 112 2.9e-05 17.8 0.0 1 1 4.6e-05 0.001 12.8 0.0 85 112 2 29 1 29 0.80 # 3 # 623 # 1 # ID=6_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.549 6_4 - 207 DDE_Tnp_1_5 PF13737.1 112 3e-05 17.7 0.0 1 1 4.6e-05 0.001 12.8 0.0 85 112 2 29 1 29 0.80 # 3196 # 3816 # -1 # ID=6_4;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.549 5_4 - 92 Sigma70_ECF PF07638.6 185 0.00069 12.8 0.0 1 1 4.4e-06 0.00069 12.8 0.0 133 176 45 88 18 91 0.89 # 2004 # 2279 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 3_21 - 156 MarR_2 PF12802.2 62 1.4e-13 43.9 0.0 1 1 9.1e-15 4.7e-13 42.2 0.0 1 61 40 98 40 99 0.97 # 13595 # 14062 # -1 # ID=3_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.504 4_8 - 135 MarR_2 PF12802.2 62 3.6e-05 16.9 0.8 1 1 1.4e-06 7.2e-05 16.0 0.3 19 56 25 65 7 70 0.83 # 9718 # 10122 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 4_13 - 261 MarR_2 PF12802.2 62 0.00012 15.3 0.1 1 2 5.2e-05 0.0027 10.9 0.0 9 44 159 194 151 194 0.88 # 12630 # 13412 # -1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.470 4_13 - 261 MarR_2 PF12802.2 62 0.00012 15.3 0.1 2 2 0.052 2.7 1.3 0.0 16 36 215 234 197 237 0.78 # 12630 # 13412 # -1 # ID=4_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.470 5_4 - 92 Elf1 PF05129.8 81 7.1e-05 16.0 0.1 1 1 6e-07 9.4e-05 15.7 0.1 25 79 8 62 3 64 0.85 # 2004 # 2279 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.496 1_19 - 584 PIF1 PF05970.9 364 7.1e-05 15.4 0.1 1 2 0.00017 0.027 6.9 0.0 20 57 6 43 2 50 0.87 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 PIF1 PF05970.9 364 7.1e-05 15.4 0.1 2 2 0.00048 0.075 5.4 0.0 14 56 319 361 313 377 0.82 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 3_8 - 107 HTH_5 PF01022.15 47 1.7e-20 66.0 0.5 1 1 3e-22 2.3e-20 65.6 0.5 1 45 13 58 13 60 0.98 # 4383 # 4703 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 1_21 - 117 HTH_5 PF01022.15 47 7e-19 60.9 0.4 1 1 1.3e-20 1e-18 60.3 0.4 1 45 14 59 14 61 0.98 # 19221 # 19571 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.536 3_21 - 156 TrmB PF01978.14 68 3.1e-06 20.4 0.0 1 1 3.8e-08 5.9e-06 19.5 0.0 1 57 37 93 37 108 0.94 # 13595 # 14062 # -1 # ID=3_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.504 1_19 - 584 Helicase_RecD PF05127.9 177 0.0005 13.3 0.1 1 2 0.0014 0.22 4.6 0.1 3 47 14 58 12 90 0.84 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 Helicase_RecD PF05127.9 177 0.0005 13.3 0.1 2 2 0.00051 0.08 6.1 0.0 2 70 332 400 331 457 0.74 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_24 - 521 DUF2813 PF11398.3 373 5.3e-05 15.9 3.2 1 2 5.9e-06 0.00092 11.8 0.0 12 49 13 51 3 56 0.79 # 20638 # 22200 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 1_24 - 521 DUF2813 PF11398.3 373 5.3e-05 15.9 3.2 2 2 0.0012 0.18 4.3 0.2 280 333 271 325 258 330 0.80 # 20638 # 22200 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.536 2_18 - 82 Ribosomal_S4 PF00163.14 94 0.0018 12.3 0.5 1 3 0.0026 0.41 4.7 0.3 5 39 2 36 1 39 0.60 # 12390 # 12635 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.577 2_18 - 82 Ribosomal_S4 PF00163.14 94 0.0018 12.3 0.5 2 3 0.013 2 2.5 0.0 5 19 30 44 27 49 0.86 # 12390 # 12635 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.577 2_18 - 82 Ribosomal_S4 PF00163.14 94 0.0018 12.3 0.5 3 3 0.0044 0.69 3.9 0.0 5 21 44 60 42 66 0.89 # 12390 # 12635 # -1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.577 4_8 - 135 UPF0122 PF04297.9 101 0.00063 13.3 0.0 1 1 6.8e-06 0.0011 12.6 0.0 24 58 18 52 7 55 0.88 # 9718 # 10122 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 5_8 - 470 HTH_Crp_2 PF13545.1 76 0.00016 15.0 0.0 1 1 4.7e-06 0.00037 13.9 0.0 30 61 42 73 28 84 0.84 # 4359 # 5768 # 1 # ID=5_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.507 3_21 - 156 HTH_Crp_2 PF13545.1 76 0.00051 13.4 0.0 1 1 1.1e-05 0.00086 12.7 0.0 30 62 60 92 55 105 0.91 # 13595 # 14062 # -1 # ID=3_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.504 1_19 - 584 AAA_10 PF12846.2 304 1.1e-06 21.8 0.2 1 2 1.5e-05 0.0011 11.9 0.0 2 80 9 86 8 290 0.85 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 AAA_10 PF12846.2 304 1.1e-06 21.8 0.2 2 2 0.00024 0.018 7.9 0.1 3 43 329 371 327 418 0.80 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 4_1 - 255 AAA_10 PF12846.2 304 1.2e-05 18.4 0.0 1 1 2.4e-07 1.9e-05 17.7 0.0 3 33 103 133 101 174 0.88 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 3_8 - 107 HTH_20 PF12840.2 61 5.2e-12 39.0 0.2 1 1 1.8e-13 7.1e-12 38.6 0.2 2 61 6 65 5 65 0.98 # 4383 # 4703 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 1_21 - 117 HTH_20 PF12840.2 61 2.1e-11 37.0 0.1 1 1 9.2e-13 3.6e-11 36.3 0.1 2 61 7 66 6 66 0.96 # 19221 # 19571 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.536 3_21 - 156 HTH_20 PF12840.2 61 1.6e-05 18.2 0.0 1 1 7.3e-07 2.8e-05 17.4 0.0 19 58 53 92 34 95 0.87 # 13595 # 14062 # -1 # ID=3_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.504 1_48 - 307 HTH_20 PF12840.2 61 0.00051 13.4 0.1 1 1 3.2e-05 0.0013 12.1 0.1 26 59 25 59 16 61 0.85 # 43288 # 44208 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.526 1_19 - 584 ArsA_ATPase PF02374.10 305 1.6e-133 437.9 0.0 1 3 1.5e-91 7.9e-90 294.4 0.0 2 301 9 293 8 297 0.97 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 ArsA_ATPase PF02374.10 305 1.6e-133 437.9 0.0 2 3 1.4e-35 7.1e-34 110.7 0.1 3 162 329 476 327 484 0.93 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 ArsA_ATPase PF02374.10 305 1.6e-133 437.9 0.0 3 3 8.9e-11 4.6e-09 29.2 0.0 200 300 483 582 475 583 0.93 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_15 - 322 ArsA_ATPase PF02374.10 305 5.4e-45 147.2 0.0 1 2 1.5e-36 7.7e-35 113.8 0.1 4 167 67 220 64 222 0.90 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 1_15 - 322 ArsA_ATPase PF02374.10 305 5.4e-45 147.2 0.0 2 2 1.8e-12 9.1e-11 34.8 0.0 178 300 199 320 196 321 0.93 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 2_20 - 389 ArsA_ATPase PF02374.10 305 2.8e-06 20.1 0.4 1 2 5e-06 0.00026 13.6 0.1 9 36 115 142 109 151 0.89 # 13695 # 14861 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.502 2_20 - 389 ArsA_ATPase PF02374.10 305 2.8e-06 20.1 0.4 2 2 0.0033 0.17 4.3 0.0 123 136 231 244 221 251 0.84 # 13695 # 14861 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.502 1_19 - 584 AAA_31 PF13614.1 157 3e-11 37.0 0.1 1 2 1.9e-08 9.9e-07 22.3 0.0 5 127 12 145 10 155 0.66 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 AAA_31 PF13614.1 157 3e-11 37.0 0.1 2 2 0.00018 0.0094 9.4 0.0 3 38 330 364 328 409 0.74 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 2_20 - 389 AAA_31 PF13614.1 157 1.6e-09 31.5 0.0 1 2 4.2e-08 2.2e-06 21.2 0.0 2 49 108 155 107 195 0.92 # 13695 # 14861 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.502 2_20 - 389 AAA_31 PF13614.1 157 1.6e-09 31.5 0.0 2 2 0.00054 0.028 7.9 0.1 110 152 227 268 223 272 0.84 # 13695 # 14861 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.502 1_15 - 322 AAA_31 PF13614.1 157 3.3e-06 20.6 0.0 1 1 1.7e-07 8.8e-06 19.3 0.0 9 47 72 110 70 225 0.86 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 1_19 - 584 TIGR02397 TIGR02397 355 0.00039 12.9 0.6 1 2 0.00047 0.073 5.4 0.1 38 54 10 26 4 37 0.77 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 TIGR02397 TIGR02397 355 0.00039 12.9 0.6 2 2 0.00051 0.079 5.3 0.1 40 59 331 350 321 354 0.83 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_9 - 240 NmrA PF05368.8 233 0.00041 13.1 0.3 1 1 7.3e-06 0.00057 12.7 0.3 1 68 10 78 10 97 0.87 # 8802 # 9521 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_47 - 56 NmrA PF05368.8 233 0.0011 11.8 0.0 1 1 1.5e-05 0.0012 11.7 0.0 1 23 7 29 7 37 0.91 # 43038 # 43205 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.464 4_1 - 255 IstB_IS21 PF01695.12 178 3.4e-57 186.2 0.0 1 1 1.3e-58 5e-57 185.7 0.0 2 177 55 231 54 232 0.98 # 1429 # 2193 # -1 # ID=4_1;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.573 1_19 - 584 IstB_IS21 PF01695.12 178 5.2e-11 35.8 0.2 1 2 1.8e-06 7e-05 15.8 0.0 50 84 11 45 3 52 0.92 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_19 - 584 IstB_IS21 PF01695.12 178 5.2e-11 35.8 0.2 2 2 8.4e-07 3.3e-05 16.9 0.0 49 83 329 363 320 383 0.85 # 17038 # 18789 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.526 1_15 - 322 IstB_IS21 PF01695.12 178 1.8e-05 17.7 0.1 1 1 8.3e-07 3.2e-05 16.9 0.1 50 82 67 99 51 110 0.86 # 13715 # 14680 # 1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.607 4_5 - 719 IstB_IS21 PF01695.12 178 0.00045 13.2 0.0 1 1 2.8e-05 0.0011 11.9 0.0 48 69 203 224 196 235 0.82 # 5478 # 7634 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.498 1_9 - 240 KR PF08659.5 181 1.6e-11 37.7 0.2 1 1 2.9e-13 2.2e-11 37.2 0.2 3 125 10 121 9 167 0.86 # 8802 # 9521 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_47 - 56 KR PF08659.5 181 0.00031 14.0 0.1 1 1 4.7e-06 0.00037 13.7 0.1 3 23 7 27 6 37 0.90 # 43038 # 43205 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.464 1_47 - 56 Semialdhyde_dh PF01118.19 121 0.00053 13.8 0.1 1 1 3.6e-06 0.00057 13.7 0.1 1 23 6 28 6 43 0.78 # 43038 # 43205 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.464 2_17 - 147 BrkDBD PF09607.5 58 0.00034 13.7 0.0 1 1 4.2e-06 0.00065 12.8 0.0 2 47 11 53 10 58 0.82 # 10744 # 11184 # -1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.551 3_19 - 278 HTH_21 PF13276.1 60 1.2e-18 60.5 6.4 1 1 1.1e-19 2.7e-18 59.3 6.4 3 60 36 91 33 91 0.89 # 11905 # 12738 # -1 # ID=3_19;partial=00;start_type=GTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.542 2_11 - 302 HTH_21 PF13276.1 60 6.9e-18 58.0 5.1 1 2 9.6e-18 2.5e-16 53.0 1.5 6 57 49 106 42 108 0.77 # 6273 # 7178 # -1 # ID=2_11;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.550 2_11 - 302 HTH_21 PF13276.1 60 6.9e-18 58.0 5.1 2 2 0.0059 0.15 5.7 0.1 12 33 265 288 256 301 0.78 # 6273 # 7178 # -1 # ID=2_11;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.550 4_7 - 346 HTH_21 PF13276.1 60 2.8e-15 49.7 6.9 1 1 2.9e-16 7.5e-15 48.3 6.9 9 60 106 156 97 158 0.85 # 8543 # 9580 # 1 # ID=4_7;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.498 1_12 - 198 HTH_21 PF13276.1 60 3.3e-09 30.2 0.5 1 1 2.4e-10 6.4e-09 29.3 0.5 6 55 32 82 27 89 0.82 # 11475 # 12068 # 1 # ID=1_12;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.552 3_14 - 187 HTH_21 PF13276.1 60 3.6e-07 23.7 0.0 1 1 2.4e-08 6.1e-07 23.0 0.0 37 57 18 38 6 40 0.84 # 9270 # 9830 # 1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.560 4_8 - 135 HTH_21 PF13276.1 60 0.00024 14.7 1.6 1 1 2.5e-05 0.00066 13.2 0.1 26 47 96 117 93 124 0.94 # 9718 # 10122 # -1 # ID=4_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/6d923457-2d00-426f-92f2-20ff41702988 # Target file: checkm_output/bins/pm916/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm916/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/6d923457-2d00-426f-92f2-20ff41702988 checkm_output/bins/pm916/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:18:04 2017 # [ok]