# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_4 - 280 rve_3 PF13683.1 67 5.1e-15 44.5 0.0 1 1 1e-15 1e-14 43.6 0.0 2 67 195 261 194 261 0.96 # 1460 # 2299 # 1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.546 1_4 - 280 rve PF00665.21 120 1e-33 105.7 0.1 1 1 1.5e-34 1.5e-33 105.2 0.1 2 120 107 223 106 223 0.97 # 1460 # 2299 # 1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.546 1_3 - 101 HTH_Tnp_1 PF01527.15 76 9.6e-15 44.1 0.5 1 1 1.2e-15 1.2e-14 43.8 0.5 1 76 1 76 1 76 0.95 # 1131 # 1433 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 1_4 - 280 rve_2 PF13333.1 52 3.3e-09 26.5 0.0 1 1 7.1e-10 7.1e-09 25.4 0.0 1 49 213 266 213 268 0.83 # 1460 # 2299 # 1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.546 1_3 - 101 LZ_Tnp_IS481 PF13011.1 85 6.6e-07 19.4 0.1 1 1 1e-07 1e-06 18.7 0.1 20 52 17 49 14 73 0.88 # 1131 # 1433 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 1_3 - 101 HTH_23 PF13384.1 50 1.5e-07 20.7 0.0 1 2 6.9e-08 6.9e-07 18.6 0.0 7 43 12 48 7 55 0.82 # 1131 # 1433 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 1_3 - 101 HTH_23 PF13384.1 50 1.5e-07 20.7 0.0 2 2 0.071 0.71 -0.5 0.0 4 16 83 95 81 100 0.79 # 1131 # 1433 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 1_3 - 101 HTH_29 PF13551.1 112 9.1e-06 15.5 0.1 1 1 1.3e-06 1.3e-05 15.0 0.1 6 62 17 64 12 89 0.74 # 1131 # 1433 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 1_3 - 101 HTH_28 PF13518.1 52 1.8e-07 20.8 0.0 1 1 3e-08 3e-07 20.1 0.0 1 38 10 48 10 57 0.88 # 1131 # 1433 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.455 1_4 - 280 DDE_Tnp_IS240 PF13610.1 140 5.7e-11 32.2 0.0 1 1 7.6e-12 7.6e-11 31.8 0.0 2 139 112 253 111 254 0.88 # 1460 # 2299 # 1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.546 1_4 - 280 HTH_21 PF13276.1 60 3.8e-10 29.4 0.5 1 1 7.6e-11 7.6e-10 28.5 0.5 6 55 32 82 27 89 0.82 # 1460 # 2299 # 1 # ID=1_4;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.546 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/5f90288c-7b88-4ca1-8a76-fc7dc7069412 # Target file: checkm_output/bins/pm915/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm915/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/5f90288c-7b88-4ca1-8a76-fc7dc7069412 checkm_output/bins/pm915/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:17:56 2017 # [ok]