# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_21 - 332 ATP-synt_ab PF00006.20 215 0.00015 12.4 0.0 1 1 8.8e-06 0.00025 11.7 0.0 16 62 159 205 151 247 0.86 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 KaiC PF06745.8 227 4.7e-05 13.6 0.0 1 1 3e-06 8.5e-05 12.8 0.0 16 53 155 190 148 240 0.77 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_13 - 341 HHH_3 PF12836.2 65 5.2e-05 14.3 0.0 1 1 3.8e-06 0.00011 13.3 0.0 14 57 212 255 210 257 0.95 # 6567 # 7589 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.500 1_21 - 332 ABC_tran PF00005.22 137 4.4e-07 21.4 0.0 1 1 2.5e-08 6.9e-07 20.8 0.0 6 45 153 192 150 257 0.87 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_13 - 341 HHH_5 PF14520.1 60 3.6e-05 15.1 0.0 1 1 4.5e-06 0.00012 13.3 0.0 6 49 213 253 210 257 0.91 # 6567 # 7589 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.500 1_21 - 332 Sigma54_activat PF00158.21 168 2.4e-06 18.2 0.0 1 1 1.6e-07 4.4e-06 17.4 0.0 14 54 150 190 138 213 0.82 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 FtsK_SpoIIIE PF01580.13 205 2.4e-07 21.5 0.0 1 1 1.7e-08 4.8e-07 20.5 0.0 38 64 158 184 139 191 0.81 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_16 - 202 HTH_38 PF13936.1 44 1.4e-08 25.4 1.0 1 1 1.7e-09 4.9e-08 23.6 0.0 15 44 168 197 160 197 0.93 # 10071 # 10676 # -1 # ID=1_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 1_21 - 332 MobB PF03205.9 140 2.7e-06 18.2 1.8 1 1 1.5e-07 4.2e-06 17.6 0.3 2 39 160 196 159 201 0.83 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_1 - 201 TBPIP PF07106.8 169 0.019 5.6 14.1 1 2 0.00011 0.0031 8.2 5.2 74 116 31 73 26 120 0.79 # 1 # 603 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.514 1_1 - 201 TBPIP PF07106.8 169 0.019 5.6 14.1 2 2 0.0049 0.14 2.8 1.6 84 133 150 198 126 200 0.80 # 1 # 603 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.514 1_21 - 332 Myosin_head PF00063.16 689 4.4e-05 12.7 0.0 1 1 2.2e-06 6.2e-05 12.2 0.0 84 110 157 183 147 209 0.90 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 AAA_19 PF13245.1 76 0.00018 12.4 0.1 1 1 1.4e-05 0.00039 11.3 0.1 5 48 153 191 149 224 0.78 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_16 - 202 Sigma70_r4_2 PF08281.7 54 3.6e-07 20.8 0.0 1 1 4e-08 1.1e-06 19.2 0.0 17 44 165 191 165 199 0.86 # 10071 # 10676 # -1 # ID=1_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 1_21 - 332 AAA_23 PF13476.1 202 0.00013 13.4 0.1 1 1 1.9e-05 0.00027 12.4 0.1 19 39 158 178 149 184 0.85 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_1 - 201 AAA_23 PF13476.1 202 0.0022 9.4 10.2 1 2 0.079 1.1 0.6 6.7 172 199 33 60 26 63 0.78 # 1 # 603 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.514 1_1 - 201 AAA_23 PF13476.1 202 0.0022 9.4 10.2 2 2 6.6e-05 0.00093 10.6 0.1 98 196 68 185 59 198 0.60 # 1 # 603 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.514 1_21 - 332 Zeta_toxin PF06414.7 201 4.3e-07 20.3 0.0 1 1 2.7e-08 7.5e-07 19.5 0.0 12 51 154 193 145 204 0.86 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 AAA_30 PF13604.1 196 4.2e-05 14.3 0.1 1 2 2.4e-05 0.00066 10.4 0.1 11 51 151 190 145 197 0.80 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 AAA_30 PF13604.1 196 4.2e-05 14.3 0.1 2 2 0.012 0.33 1.6 0.0 121 178 204 258 191 272 0.77 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_16 - 202 GerE PF00196.14 58 8.3e-06 16.3 0.0 1 1 5.1e-07 1.4e-05 15.5 0.0 11 35 166 190 165 201 0.88 # 10071 # 10676 # -1 # ID=1_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 1_1 - 201 DivIC PF04977.10 80 0.0088 6.7 8.8 1 2 2.9e-05 0.00081 10.1 1.7 13 61 35 66 25 71 0.60 # 1 # 603 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.514 1_1 - 201 DivIC PF04977.10 80 0.0088 6.7 8.8 2 2 0.044 1.2 -0.1 0.8 31 37 174 180 147 199 0.54 # 1 # 603 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.514 1_21 - 332 Parvo_NS1 PF01057.12 272 0.00024 11.1 0.0 1 1 1.4e-05 0.0004 10.4 0.0 104 138 148 182 140 188 0.90 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 cobW PF02492.14 178 6.2e-07 20.1 0.0 1 1 4.1e-08 1.1e-06 19.2 0.0 3 45 161 202 159 257 0.77 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 AAA_16 PF13191.1 185 1.9e-07 22.3 0.0 1 1 1.7e-08 4.8e-07 21.0 0.0 24 61 158 195 149 274 0.82 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 AAA_22 PF13401.1 131 7.6e-08 23.7 0.0 1 1 6.1e-09 1.7e-07 22.6 0.0 3 54 157 202 153 241 0.74 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 AAA_29 PF13555.1 62 0.00028 11.6 0.0 1 1 2.3e-05 0.00065 10.4 0.0 19 43 157 178 145 188 0.75 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_16 - 202 HTH_23 PF13384.1 50 3.4e-08 24.2 0.2 1 1 1.2e-09 3.4e-08 24.2 0.2 10 42 166 198 160 201 0.92 # 10071 # 10676 # -1 # ID=1_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 1_16 - 202 HTH_7 PF02796.10 45 4.2e-06 17.7 0.0 1 1 4.4e-07 1.2e-05 16.3 0.0 13 38 165 190 156 190 0.93 # 10071 # 10676 # -1 # ID=1_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 1_16 - 202 HTH_29 PF13551.1 112 1.2e-05 16.6 0.5 1 2 0.0071 0.2 3.0 0.0 51 88 43 87 25 101 0.62 # 10071 # 10676 # -1 # ID=1_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 1_16 - 202 HTH_29 PF13551.1 112 1.2e-05 16.6 0.5 2 2 1.9e-05 0.00053 11.3 0.2 4 36 166 197 165 200 0.89 # 10071 # 10676 # -1 # ID=1_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 1_21 - 332 Arch_ATPase PF01637.13 234 2.6e-06 18.4 0.0 1 1 1.6e-07 4.5e-06 17.6 0.0 15 68 155 205 149 226 0.87 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 PhoH PF02562.11 205 8.5e-05 12.9 0.0 1 1 5.6e-06 0.00016 12.1 0.0 14 45 153 184 143 210 0.79 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 ResIII PF04851.10 184 1.7e-06 19.1 0.0 1 1 9.6e-08 2.7e-06 18.4 0.0 22 61 148 196 104 202 0.81 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 TrwB_AAD_bind PF10412.4 386 3.8e-06 16.8 0.1 1 1 2.1e-07 5.9e-06 16.1 0.1 14 49 157 191 150 202 0.81 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 AAA_18 PF13238.1 129 1.3e-06 19.9 0.0 1 1 9.8e-08 2.7e-06 18.8 0.0 1 29 161 194 161 213 0.77 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 GvpD PF07088.6 484 7.2e-07 18.9 0.0 1 1 3.9e-08 1.1e-06 18.3 0.0 10 89 158 241 150 262 0.76 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_4 - 284 ATP-synt PF00231.14 290 0.00025 11.5 0.1 1 1 1.2e-05 0.00033 11.1 0.1 91 174 112 191 109 245 0.82 # 2360 # 3211 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 1_21 - 332 DUF258 PF03193.11 161 3.1e-05 14.3 0.0 1 1 2e-06 5.7e-05 13.5 0.0 29 61 151 184 129 224 0.81 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 DUF87 PF01935.12 229 7.4e-07 20.3 0.0 1 1 4.8e-08 1.4e-06 19.4 0.0 9 61 144 195 138 196 0.78 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_16 - 202 HTH_28 PF13518.1 52 7.2e-09 26.7 0.4 1 1 6.1e-10 1.7e-08 25.5 0.4 4 38 165 199 165 201 0.92 # 10071 # 10676 # -1 # ID=1_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 1_16 - 202 HTH_24 PF13412.1 48 6.7e-06 16.6 0.0 1 1 5.2e-07 1.5e-05 15.6 0.0 16 40 172 196 168 196 0.89 # 10071 # 10676 # -1 # ID=1_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 1_21 - 332 Sigma54_activ_2 PF14532.1 138 6.4e-07 20.6 0.0 1 1 5e-08 1.4e-06 19.5 0.0 14 65 151 202 145 212 0.92 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_16 - 202 HTH_10 PF04967.7 53 0.00012 12.8 0.0 1 1 1.3e-05 0.00037 11.3 0.0 27 46 177 196 173 199 0.86 # 10071 # 10676 # -1 # ID=1_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 1_21 - 332 MMR_HSR1 PF01926.18 116 0.00012 13.2 0.0 1 1 7.1e-06 0.0002 12.5 0.0 2 41 161 205 160 310 0.84 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 DEAD PF00270.24 169 8.3e-07 19.7 0.0 1 1 5.7e-08 1.6e-06 18.8 0.0 13 70 157 211 144 242 0.78 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_16 - 202 HTH_31 PF13560.1 64 0.00067 11.0 4.3 1 2 0.023 0.64 1.5 0.1 15 38 23 56 16 77 0.73 # 10071 # 10676 # -1 # ID=1_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 1_16 - 202 HTH_31 PF13560.1 64 0.00067 11.0 4.3 2 2 4.9e-05 0.0014 10.0 0.5 11 39 170 198 142 201 0.90 # 10071 # 10676 # -1 # ID=1_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 1_21 - 332 DUF2075 PF09848.4 352 2.5e-05 14.4 0.0 1 1 1.3e-06 3.6e-05 13.9 0.0 1 32 158 187 158 216 0.76 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 T2SE PF00437.15 272 7.8e-53 170.1 0.1 1 1 3.2e-54 9.1e-53 169.9 0.1 3 271 10 311 8 312 0.94 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 NACHT PF05729.7 166 2.4e-05 15.1 0.0 1 1 1.9e-06 5.4e-05 14.0 0.0 1 27 159 185 159 188 0.90 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 UPF0079 PF02367.12 123 1.7e-06 18.8 0.0 1 1 1.2e-07 3.4e-06 17.8 0.0 9 45 152 188 145 193 0.85 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 AAA_17 PF13207.1 121 0.00011 14.2 0.1 1 1 9.5e-06 0.00027 12.9 0.1 2 40 161 195 160 229 0.75 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 AAA_7 PF12775.2 272 2.8e-05 14.4 0.0 1 1 2.3e-06 6.6e-05 13.2 0.0 25 64 150 189 139 209 0.86 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 TIGR03346 TIGR03346 853 4.1e-05 12.8 0.0 1 1 2e-06 5.6e-05 12.3 0.0 598 641 161 204 149 238 0.89 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 Pox_A32 PF04665.7 241 2.8e-05 14.6 0.0 1 1 1.7e-06 4.8e-05 13.8 0.0 12 46 157 191 150 210 0.85 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 AAA_14 PF13173.1 128 7.7e-05 13.7 0.1 1 2 0.0022 0.062 4.3 0.0 64 96 135 165 98 166 0.69 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 AAA_14 PF13173.1 128 7.7e-05 13.7 0.1 2 2 3.1e-05 0.00086 10.4 0.0 2 35 158 191 157 215 0.80 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_13 - 341 Transposase_20 PF02371.11 87 7.5e-31 97.3 0.2 1 1 5.7e-32 1.6e-30 96.3 0.2 2 76 212 286 211 297 0.94 # 6567 # 7589 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.500 1_16 - 202 HTH_Tnp_ISL3 PF13542.1 52 1.2e-05 15.7 0.2 1 1 1e-06 2.8e-05 14.4 0.2 29 51 175 197 166 198 0.85 # 10071 # 10676 # -1 # ID=1_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 1_21 - 332 AAA_33 PF13671.1 143 0.0001 13.3 0.0 1 1 5.9e-06 0.00017 12.6 0.0 2 26 161 188 160 256 0.81 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_16 - 202 CENP-B_N PF04218.8 53 4.4e-05 14.0 0.0 1 1 3.9e-06 0.00011 12.8 0.0 21 45 172 196 165 199 0.87 # 10071 # 10676 # -1 # ID=1_16;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.559 1_21 - 332 RNA_helicase PF00910.17 107 5.6e-06 17.7 0.1 1 2 3.5e-06 9.7e-05 13.7 0.0 1 25 161 185 161 242 0.75 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 RNA_helicase PF00910.17 107 5.6e-06 17.7 0.1 2 2 0.027 0.76 1.2 0.1 69 100 290 322 281 328 0.78 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 AAA_2 PF07724.9 171 1.6e-06 19.2 0.0 1 1 1e-07 2.9e-06 18.4 0.0 3 54 158 204 156 216 0.89 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_1 - 201 3HCDH_N PF02737.13 180 0.00017 12.3 1.4 1 2 0.00023 0.0064 7.2 0.1 68 118 33 83 18 87 0.84 # 1 # 603 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.514 1_1 - 201 3HCDH_N PF02737.13 180 0.00017 12.3 1.4 2 2 0.0021 0.058 4.1 0.2 40 79 142 179 111 187 0.62 # 1 # 603 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.514 1_2 - 337 AAA_10 PF12846.2 304 1.8e-24 77.7 0.0 1 1 2.3e-25 3.3e-24 76.9 0.0 43 293 3 243 1 251 0.81 # 621 # 1631 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.514 1_21 - 332 AAA_10 PF12846.2 304 7.3e-05 13.3 0.0 1 1 8.2e-06 0.00011 12.7 0.0 3 29 160 185 158 233 0.81 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 IstB_IS21 PF01695.12 178 7.7e-06 16.5 0.0 1 1 4.5e-07 1.2e-05 15.8 0.0 44 73 155 184 127 201 0.82 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_21 - 332 GTP_EFTU PF00009.22 188 6.1e-05 13.6 0.2 1 1 3.5e-06 9.7e-05 12.9 0.2 2 32 157 187 156 205 0.83 # 16618 # 17613 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/41721a15-df32-4db5-a90b-e4669908011f # Target file: checkm_output/bins/pm906/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm906/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/41721a15-df32-4db5-a90b-e4669908011f checkm_output/bins/pm906/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:17:49 2017 # [ok]