# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_56 - 228 Cons_hypoth95 PF03602.10 183 1.3e-05 17.9 0.0 1 2 0.00032 0.04 6.5 0.0 113 146 19 54 5 81 0.66 # 46061 # 46744 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_56 - 228 Cons_hypoth95 PF03602.10 183 1.3e-05 17.9 0.0 2 2 4e-05 0.0051 9.4 0.0 41 62 162 183 145 218 0.78 # 46061 # 46744 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 3_3 - 522 ABC_tran PF00005.22 137 3.2e-08 27.2 0.0 1 1 1.8e-09 1.1e-07 25.4 0.0 12 45 36 69 24 247 0.60 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 1_29 - 876 ABC_tran PF00005.22 137 0.0013 12.3 0.0 1 1 5.8e-05 0.0037 10.8 0.0 13 102 481 610 476 619 0.60 # 27166 # 29793 # -1 # ID=1_29;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.539 1_56 - 228 TIGR00095 TIGR00095 194 0.00021 13.9 0.0 1 2 0.00077 0.098 5.2 0.0 124 138 20 34 3 79 0.72 # 46061 # 46744 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_56 - 228 TIGR00095 TIGR00095 194 0.00021 13.9 0.0 2 2 0.00024 0.031 6.8 0.0 53 86 164 199 155 218 0.77 # 46061 # 46744 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 2_7 - 102 HTH_AsnC-type PF13404.1 42 1.3e-05 17.9 0.0 1 1 1.9e-07 2.4e-05 17.1 0.0 20 42 36 58 30 58 0.91 # 5570 # 5875 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.582 1_29 - 876 FtsK_SpoIIIE PF01580.13 205 2.2e-05 17.2 0.2 1 2 4.1e-06 0.00026 13.7 0.0 39 63 476 504 463 507 0.84 # 27166 # 29793 # -1 # ID=1_29;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.539 1_29 - 876 FtsK_SpoIIIE PF01580.13 205 2.2e-05 17.2 0.2 2 2 0.036 2.3 0.9 0.0 75 166 530 625 529 634 0.75 # 27166 # 29793 # -1 # ID=1_29;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.539 3_3 - 522 FtsK_SpoIIIE PF01580.13 205 0.00024 13.8 0.0 1 1 8.2e-06 0.00052 12.7 0.0 40 60 37 57 2 64 0.74 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 2_7 - 102 SpoIIID PF12116.3 82 0.0012 12.1 0.3 1 1 3.4e-05 0.0043 10.3 0.3 10 38 23 52 18 83 0.81 # 5570 # 5875 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.582 1_29 - 876 MobB PF03205.9 140 0.00086 12.3 0.1 1 1 2.7e-05 0.0034 10.3 0.0 4 37 483 515 481 523 0.79 # 27166 # 29793 # -1 # ID=1_29;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.539 2_7 - 102 HTH_34 PF13601.1 80 0.00015 15.0 0.1 1 1 4.9e-06 0.00062 13.1 0.1 6 78 25 92 21 93 0.80 # 5570 # 5875 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.582 2_7 - 102 MarR PF01047.17 59 0.00033 13.6 0.0 1 1 4.1e-06 0.00052 13.0 0.0 15 44 31 60 19 60 0.79 # 5570 # 5875 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.582 2_7 - 102 HTH_Tnp_4 PF13613.1 53 0.00011 15.0 0.0 1 1 1.3e-06 0.00016 14.4 0.0 18 47 32 61 31 67 0.89 # 5570 # 5875 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.582 2_9 - 226 TetR_N PF00440.18 47 3.2e-19 61.6 0.1 1 1 1.4e-20 8.7e-19 60.2 0.0 2 47 19 64 18 64 0.97 # 7420 # 8097 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.625 8_2 - 147 TetR_N PF00440.18 47 9.3e-05 15.3 0.0 1 1 2.8e-06 0.00018 14.4 0.0 30 47 6 23 4 23 0.91 # 130 # 570 # 1 # ID=8_2;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.587 1_7 - 1757 AAA_19 PF13245.1 76 6.2e-08 25.6 1.3 1 1 5.5e-09 3.5e-07 23.2 0.3 5 76 979 1047 974 1047 0.74 # 4377 # 9647 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 3_3 - 522 AAA_19 PF13245.1 76 0.00027 14.0 0.0 1 1 1.2e-05 0.00075 12.5 0.0 10 39 35 63 29 72 0.83 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 1_56 - 228 MethyltransfD12 PF02086.10 260 0.00072 12.3 0.0 1 2 0.022 2.8 0.5 0.0 178 188 21 31 14 91 0.83 # 46061 # 46744 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_56 - 228 MethyltransfD12 PF02086.10 260 0.00072 12.3 0.0 2 2 4e-05 0.0051 9.5 0.0 20 46 163 189 148 197 0.78 # 46061 # 46744 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_41 - 229 Sigma70_r4_2 PF08281.7 54 0.0011 11.8 0.0 1 1 1.3e-05 0.0017 11.1 0.0 19 48 160 188 150 194 0.79 # 35624 # 36310 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.357 5_4 - 246 Rep_3 PF01051.16 222 6.3e-25 81.3 4.5 1 1 1.2e-26 7.4e-25 81.0 4.5 29 222 2 225 1 225 0.86 # 2245 # 2982 # -1 # ID=5_4;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.359 5_3 - 281 Rep_3 PF01051.16 222 1.7e-21 70.1 7.1 1 1 3.3e-23 2.1e-21 69.7 7.1 3 222 73 277 71 277 0.91 # 1382 # 2224 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.327 12_1 - 235 rve PF00665.21 120 4.1e-13 42.8 0.1 1 2 0.015 1.9 1.9 0.0 78 102 27 49 6 54 0.84 # 64 # 768 # 1 # ID=12_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 12_1 - 235 rve PF00665.21 120 4.1e-13 42.8 0.1 2 2 6.1e-14 7.7e-12 38.7 0.0 9 119 75 182 70 183 0.89 # 64 # 768 # 1 # ID=12_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 3_3 - 522 AAA_23 PF13476.1 202 2.2e-11 37.7 1.0 1 1 2.4e-13 3e-11 37.2 0.4 2 54 16 80 15 291 0.74 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 1_47 - 188 Methyltransf_26 PF13659.1 117 3.4e-14 46.2 0.0 1 1 9e-16 5.7e-14 45.4 0.0 2 114 52 147 51 150 0.91 # 40180 # 40743 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_56 - 228 Methyltransf_26 PF13659.1 117 1.8e-12 40.6 0.1 1 2 7e-08 4.5e-06 20.0 0.0 54 114 4 71 2 74 0.73 # 46061 # 46744 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_56 - 228 Methyltransf_26 PF13659.1 117 1.8e-12 40.6 0.1 2 2 1.9e-07 1.2e-05 18.6 0.0 4 45 167 207 164 223 0.82 # 46061 # 46744 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_8 - 733 Zeta_toxin PF06414.7 201 0.00098 11.5 0.0 1 1 3.5e-05 0.0044 9.3 0.0 21 49 190 219 182 236 0.85 # 9647 # 11845 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 1_7 - 1757 AAA_30 PF13604.1 196 9.3e-45 145.8 12.8 1 3 0.083 5.3 -0.2 0.0 41 86 223 269 219 281 0.81 # 4377 # 9647 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_7 - 1757 AAA_30 PF13604.1 196 9.3e-45 145.8 12.8 2 3 1.1e-05 0.0007 12.4 2.6 7 142 420 547 416 571 0.81 # 4377 # 9647 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_7 - 1757 AAA_30 PF13604.1 196 9.3e-45 145.8 12.8 3 3 6.4e-44 4.1e-42 137.2 1.2 1 186 968 1156 968 1162 0.93 # 4377 # 9647 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_8 - 733 AAA_30 PF13604.1 196 0.00074 12.3 0.0 1 1 2.6e-05 0.0016 11.2 0.0 21 57 188 224 180 230 0.85 # 9647 # 11845 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 3_3 - 522 SMC_N PF02463.14 220 7.6e-13 41.4 0.1 1 2 1.4e-12 1.8e-10 33.6 0.0 2 77 13 87 12 129 0.79 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 3_3 - 522 SMC_N PF02463.14 220 7.6e-13 41.4 0.1 2 2 0.00044 0.056 5.9 0.0 155 211 235 292 149 302 0.68 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 12_1 - 235 HTH_Tnp_1 PF01527.15 76 0.00031 14.0 0.3 1 1 5.4e-06 0.00068 12.9 0.3 4 51 6 58 4 63 0.79 # 64 # 768 # 1 # ID=12_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_8 - 733 TraG-D_C PF12696.2 128 9.8e-21 67.2 0.0 1 1 1.4e-22 1.8e-20 66.4 0.0 1 127 419 541 419 542 0.86 # 9647 # 11845 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 12_1 - 235 DDE_3 PF13358.1 146 0.00088 12.3 0.0 1 1 2.1e-05 0.0026 10.7 0.0 32 90 82 141 59 146 0.87 # 64 # 768 # 1 # ID=12_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_56 - 228 UPF0020 PF01170.13 180 9e-06 18.6 0.0 1 2 0.00033 0.021 7.6 0.0 104 119 18 33 7 88 0.73 # 46061 # 46744 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_56 - 228 UPF0020 PF01170.13 180 9e-06 18.6 0.0 2 2 0.00012 0.0078 9.0 0.0 28 54 163 189 158 221 0.67 # 46061 # 46744 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_47 - 188 UPF0020 PF01170.13 180 0.0013 11.5 0.0 1 1 7.6e-05 0.0049 9.7 0.0 19 43 41 65 35 130 0.78 # 40180 # 40743 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_47 - 188 Methyltransf_25 PF13649.1 101 0.00014 15.4 0.0 1 1 1.7e-06 0.00021 14.9 0.0 1 101 54 142 54 142 0.81 # 40180 # 40743 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 9_4 - 396 DDE_Tnp_1 PF01609.16 213 1.4e-18 60.5 0.0 1 1 1.4e-20 1.8e-18 60.1 0.0 2 210 70 305 69 308 0.89 # 1272 # 2459 # -1 # ID=9_4;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.566 1_35 - 476 DivIC PF04977.10 80 0.0011 11.7 4.6 1 1 1.8e-05 0.0023 10.7 4.6 17 66 76 124 72 125 0.92 # 31848 # 33275 # -1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.576 3_3 - 522 AAA_21 PF13304.1 303 2.6e-18 60.2 1.8 1 1 3.2e-20 4.1e-18 59.5 0.1 1 301 37 283 37 285 0.95 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 1_30 - 74 zf-dskA_traR PF01258.12 36 4.7e-15 48.3 3.3 1 1 5.4e-17 6.9e-15 47.8 3.3 5 36 35 67 30 67 0.91 # 29953 # 30174 # -1 # ID=1_30;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.450 3_3 - 522 AAA PF00004.24 132 1.2e-06 22.0 0.1 1 2 0.0025 0.32 4.5 0.0 3 19 40 56 38 75 0.89 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 3_3 - 522 AAA PF00004.24 132 1.2e-06 22.0 0.1 2 2 1.6e-06 0.0002 14.8 0.1 27 96 205 266 172 298 0.76 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 1_39 - 122 CTP_transf_2 PF01467.21 157 0.00029 14.2 0.0 1 1 2.5e-06 0.00032 14.0 0.0 31 112 6 87 1 100 0.74 # 34904 # 35269 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.511 2_7 - 102 HTH_37 PF13744.1 80 0.00043 13.4 0.0 1 1 5e-06 0.00064 12.8 0.0 20 50 22 52 13 60 0.85 # 5570 # 5875 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.582 4_4 - 160 Rrf2 PF02082.15 83 1.9e-15 50.0 0.0 1 1 2.4e-17 3e-15 49.4 0.0 3 82 2 82 1 83 0.89 # 4805 # 5284 # -1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.567 3_13 - 165 zf-C4_Topoisom PF01396.14 39 0.00099 11.9 5.4 1 2 5.9e-05 0.0075 9.1 0.2 22 36 53 66 42 69 0.84 # 10168 # 10662 # 1 # ID=3_13;partial=01;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.584 3_13 - 165 zf-C4_Topoisom PF01396.14 39 0.00099 11.9 5.4 2 2 0.0015 0.19 4.6 0.5 2 10 73 81 72 82 0.83 # 10168 # 10662 # 1 # ID=3_13;partial=01;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.584 2_8 - 400 TIGR01394 TIGR01394 594 0.0019 9.3 0.0 1 1 2.2e-05 0.0028 8.8 0.0 408 486 267 343 261 354 0.84 # 6142 # 7341 # -1 # ID=2_8;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.627 1_56 - 228 N6_N4_Mtase PF01555.13 231 8.3e-37 120.1 0.0 1 2 1.3e-15 1.6e-13 43.8 0.0 1 114 21 124 21 133 0.89 # 46061 # 46744 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_56 - 228 N6_N4_Mtase PF01555.13 231 8.3e-37 120.1 0.0 2 2 5.4e-25 6.9e-23 74.5 0.0 169 228 141 200 126 203 0.90 # 46061 # 46744 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 2_7 - 102 P22_Cro PF14549.1 60 0.0008 12.4 0.1 1 1 1.2e-05 0.0015 11.5 0.1 12 28 36 52 29 57 0.86 # 5570 # 5875 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.582 1_57 - 321 Hydantoinase_A PF01968.13 290 1.9e-08 26.9 0.2 1 3 0.062 7.9 -1.3 0.0 154 175 130 151 109 155 0.77 # 47261 # 48223 # 1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.390 1_57 - 321 Hydantoinase_A PF01968.13 290 1.9e-08 26.9 0.2 2 3 3.2e-06 0.00041 12.7 0.0 68 97 156 183 149 192 0.81 # 47261 # 48223 # 1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.390 1_57 - 321 Hydantoinase_A PF01968.13 290 1.9e-08 26.9 0.2 3 3 8.3e-06 0.0011 11.4 0.0 214 265 242 297 198 307 0.78 # 47261 # 48223 # 1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.390 1_8 - 733 AAA_16 PF13191.1 185 5.5e-06 19.7 0.0 1 1 2e-07 2.5e-05 17.5 0.0 21 60 182 222 179 263 0.81 # 9647 # 11845 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 3_3 - 522 AAA_22 PF13401.1 131 1.1e-07 25.3 0.0 1 2 4.4e-05 0.0055 10.1 0.0 4 49 35 82 32 113 0.77 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 3_3 - 522 AAA_22 PF13401.1 131 1.1e-07 25.3 0.0 2 2 1e-05 0.0013 12.1 0.0 68 123 215 278 154 285 0.64 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 2_7 - 102 NUMOD1 PF07453.8 37 0.0003 13.9 0.0 1 1 4.8e-06 0.00061 12.9 0.0 20 35 37 52 30 54 0.91 # 5570 # 5875 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.582 3_3 - 522 AAA_29 PF13555.1 62 1.3e-08 27.5 0.0 1 1 2.4e-10 3.1e-08 26.4 0.0 13 52 25 64 13 72 0.79 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 2_7 - 102 HTH_1 PF00126.22 60 1.8e-24 78.6 0.7 1 1 1.9e-26 2.4e-24 78.2 0.7 4 60 24 80 21 80 0.96 # 5570 # 5875 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.582 3_3 - 522 SRP54 PF00448.17 196 0.00069 12.3 0.1 1 1 1.1e-05 0.0014 11.3 0.1 2 30 36 64 35 67 0.89 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 1_40 - 76 IF2_assoc PF08364.6 41 0.0024 11.2 2.8 1 2 0.043 5.5 0.4 0.3 19 29 6 16 3 16 0.78 # 35303 # 35530 # -1 # ID=1_40;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.430 1_40 - 76 IF2_assoc PF08364.6 41 0.0024 11.2 2.8 2 2 2.3e-05 0.003 10.9 0.1 16 32 28 44 27 51 0.86 # 35303 # 35530 # -1 # ID=1_40;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.430 12_1 - 235 HTH_32 PF13565.1 77 1.6e-06 22.1 0.2 1 1 5.6e-08 7.2e-06 20.0 0.0 26 76 5 50 2 51 0.83 # 64 # 768 # 1 # ID=12_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 2_4 - 449 A2L_zn_ribbon PF08792.5 33 0.024 7.4 5.1 1 2 0.0058 0.74 2.7 1.2 5 29 26 51 24 52 0.85 # 1850 # 3196 # 1 # ID=2_4;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.610 2_4 - 449 A2L_zn_ribbon PF08792.5 33 0.024 7.4 5.1 2 2 0.0006 0.077 5.9 0.1 2 13 390 401 390 404 0.85 # 1850 # 3196 # 1 # ID=2_4;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.610 12_1 - 235 HTH_23 PF13384.1 50 1e-05 18.4 0.5 1 2 0.047 2 1.6 0.0 7 27 11 35 7 36 0.69 # 64 # 768 # 1 # ID=12_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 12_1 - 235 HTH_23 PF13384.1 50 1e-05 18.4 0.5 2 2 5.6e-06 0.00024 14.0 0.1 28 42 41 55 40 62 0.87 # 64 # 768 # 1 # ID=12_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 2_2 - 246 HTH_23 PF13384.1 50 1.5e-05 17.8 0.4 1 1 3.7e-07 1.5e-05 17.8 0.4 2 37 171 206 170 216 0.90 # 722 # 1459 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.673 2_7 - 102 HTH_23 PF13384.1 50 0.00048 13.1 0.0 1 1 2.3e-05 0.00096 12.1 0.0 15 40 31 56 25 65 0.79 # 5570 # 5875 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.582 2_2 - 246 HTH_7 PF02796.10 45 1e-07 25.0 0.1 1 1 1.9e-09 2.4e-07 23.8 0.1 8 44 173 209 168 210 0.87 # 722 # 1459 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.673 2_4 - 449 Ribosomal_S27e PF01667.12 55 0.024 7.5 6.4 1 1 1.2e-05 0.0016 11.3 1.1 5 33 22 50 19 55 0.90 # 1850 # 3196 # 1 # ID=2_4;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.610 2_4 - 449 zinc_ribbon_4 PF13717.1 36 0.021 7.8 5.2 1 2 0.00044 0.056 6.5 0.1 2 14 24 36 24 38 0.84 # 1850 # 3196 # 1 # ID=2_4;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.610 2_4 - 449 zinc_ribbon_4 PF13717.1 36 0.021 7.8 5.2 2 2 0.0055 0.7 3.0 0.0 5 14 46 55 45 63 0.81 # 1850 # 3196 # 1 # ID=2_4;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.610 3_3 - 522 NB-ARC PF00931.17 287 0.00011 14.4 0.1 1 2 2.5e-05 0.0032 9.5 0.0 18 38 34 54 24 62 0.89 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 3_3 - 522 NB-ARC PF00931.17 287 0.00011 14.4 0.1 2 2 0.0058 0.73 1.8 0.0 216 267 161 211 142 221 0.79 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 1_47 - 188 Met_10 PF02475.11 200 0.00056 12.7 0.0 1 1 5.7e-06 0.00072 12.4 0.0 98 189 47 132 29 145 0.79 # 40180 # 40743 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 12_1 - 235 DDE_Tnp_IS66 PF03050.9 271 3.4e-12 39.3 0.6 1 1 3.7e-14 4.7e-12 38.9 0.4 5 131 10 143 6 158 0.86 # 64 # 768 # 1 # ID=12_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_47 - 188 Methyltransf_31 PF13847.1 152 7.9e-07 22.0 0.0 1 1 7.6e-09 9.7e-07 21.7 0.0 5 119 52 162 48 183 0.83 # 40180 # 40743 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_8 - 733 TrwB_AAD_bind PF10412.4 386 3.3e-150 493.2 0.0 1 1 6.3e-152 4e-150 492.9 0.0 2 386 172 561 171 561 0.99 # 9647 # 11845 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 1_29 - 876 TrwB_AAD_bind PF10412.4 386 1.1e-06 20.7 0.3 1 1 4.8e-08 3e-06 19.3 0.0 15 53 479 517 470 547 0.80 # 27166 # 29793 # -1 # ID=1_29;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.539 3_3 - 522 TIGR00611 TIGR00611 365 0.0002 13.5 0.1 1 1 3.9e-06 0.0005 12.2 0.0 3 47 13 59 11 72 0.78 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 1_56 - 228 Methyltransf_15 PF09445.5 164 0.00036 13.3 0.0 1 2 0.012 1.6 1.5 0.0 53 79 4 29 2 33 0.91 # 46061 # 46744 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_56 - 228 Methyltransf_15 PF09445.5 164 0.00036 13.3 0.0 2 2 4.2e-05 0.0054 9.5 0.0 3 31 166 194 164 209 0.86 # 46061 # 46744 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.576 1_47 - 188 Methyltransf_12 PF08242.7 99 1.4e-05 18.8 0.0 1 1 2e-07 2.5e-05 18.0 0.0 1 99 55 144 55 144 0.86 # 40180 # 40743 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_47 - 188 Methyltrans_SAM PF10672.4 286 0.0012 11.0 0.0 1 1 1.3e-05 0.0017 10.5 0.0 196 261 113 173 100 180 0.78 # 40180 # 40743 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 3_3 - 522 DUF258 PF03193.11 161 0.00031 13.2 0.0 1 1 4.6e-06 0.00059 12.3 0.0 29 60 29 60 5 74 0.74 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 1_29 - 876 DUF87 PF01935.12 229 3e-07 23.7 0.0 1 1 6.7e-09 8.5e-07 22.2 0.0 26 221 482 668 468 676 0.75 # 27166 # 29793 # -1 # ID=1_29;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.539 12_1 - 235 HTH_28 PF13518.1 52 7.3e-05 16.0 1.2 1 1 5.1e-06 0.00032 14.0 1.2 22 36 40 54 13 55 0.76 # 64 # 768 # 1 # ID=12_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 2_2 - 246 HTH_28 PF13518.1 52 0.0004 13.7 0.7 1 1 6.3e-06 0.0004 13.7 0.7 1 33 175 207 175 209 0.95 # 722 # 1459 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.673 2_9 - 226 HTH_Tnp_1_2 PF13022.1 142 0.001 12.2 0.0 1 1 1.2e-05 0.0015 11.6 0.0 22 77 24 73 5 79 0.76 # 7420 # 8097 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.625 2_7 - 102 HTH_24 PF13412.1 48 1.1e-06 21.3 0.0 1 1 1.2e-08 1.6e-06 20.7 0.0 16 44 32 60 22 60 0.86 # 5570 # 5875 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.582 2_7 - 102 HTH_30 PF13556.1 59 8.6e-06 18.6 0.1 1 1 1e-07 1.3e-05 18.0 0.1 10 44 31 65 24 75 0.88 # 5570 # 5875 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.582 1_47 - 188 TIGR03533 TIGR03533 284 2.3e-05 16.7 0.0 1 1 2.9e-07 3.7e-05 16.1 0.0 114 210 43 133 36 141 0.87 # 40180 # 40743 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_47 - 188 TIGR03534 TIGR03534 253 4.4e-08 25.8 0.0 1 1 4.2e-10 5.3e-08 25.5 0.0 81 175 45 131 15 148 0.86 # 40180 # 40743 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 3_3 - 522 MMR_HSR1 PF01926.18 116 0.0011 12.2 0.0 1 1 3.4e-05 0.0043 10.3 0.0 3 28 39 66 37 88 0.78 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 3_3 - 522 Miro PF08477.8 119 0.00025 14.8 0.0 1 1 4.7e-06 0.0006 13.6 0.0 3 32 39 68 37 91 0.81 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 1_7 - 1757 UvrD_C_2 PF13538.1 104 1.4e-07 24.9 1.0 1 2 0.013 1.7 2.2 0.0 6 44 1227 1265 1223 1294 0.75 # 4377 # 9647 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_7 - 1757 UvrD_C_2 PF13538.1 104 1.4e-07 24.9 1.0 2 2 3.6e-08 4.5e-06 20.0 0.2 3 102 1341 1444 1339 1446 0.76 # 4377 # 9647 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_47 - 188 TIGR00755 TIGR00755 256 9e-09 27.9 0.0 1 1 9.5e-11 1.2e-08 27.4 0.0 8 105 29 123 25 134 0.90 # 40180 # 40743 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 4_3 - 1051 DUF561 PF04481.7 243 0.00041 12.6 0.4 1 1 7.5e-06 0.00095 11.4 0.4 162 225 417 477 408 492 0.77 # 1583 # 4735 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.611 1_57 - 321 StbA PF06406.6 318 1e-156 513.9 1.5 1 1 9e-159 1.1e-156 513.8 1.5 1 317 1 317 1 318 0.99 # 47261 # 48223 # 1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.390 3_3 - 522 NACHT PF05729.7 166 0.00035 13.5 0.0 1 2 0.00014 0.018 7.9 0.0 2 37 37 73 36 94 0.76 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 3_3 - 522 NACHT PF05729.7 166 0.00035 13.5 0.0 2 2 0.0045 0.57 3.0 0.0 77 114 229 265 153 290 0.77 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 1_57 - 321 YbaB_DNA_bd PF02575.11 93 0.00075 12.7 0.1 1 3 0.038 4.8 0.5 0.0 33 63 129 160 112 160 0.80 # 47261 # 48223 # 1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.390 1_57 - 321 YbaB_DNA_bd PF02575.11 93 0.00075 12.7 0.1 2 3 0.028 3.6 0.9 0.0 63 78 201 216 195 223 0.84 # 47261 # 48223 # 1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.390 1_57 - 321 YbaB_DNA_bd PF02575.11 93 0.00075 12.7 0.1 3 3 0.00045 0.057 6.6 0.0 63 87 247 271 235 276 0.84 # 47261 # 48223 # 1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.390 1_8 - 733 AAA_17 PF13207.1 121 0.0004 14.5 0.0 1 1 1.2e-05 0.0015 12.6 0.0 3 27 189 217 187 262 0.68 # 9647 # 11845 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 3_3 - 522 TIGR02211 TIGR02211 221 4.4e-05 16.0 0.0 1 1 1e-06 0.00013 14.4 0.0 13 57 13 61 3 71 0.72 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 1_7 - 1757 Viral_helicase1 PF01443.13 234 0.00028 13.6 0.1 1 2 0.00031 0.039 6.6 0.0 1 23 988 1011 988 1191 0.78 # 4377 # 9647 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_7 - 1757 Viral_helicase1 PF01443.13 234 0.00028 13.6 0.1 2 2 0.0021 0.27 3.9 0.1 159 234 1370 1447 1341 1447 0.63 # 4377 # 9647 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 3_3 - 522 AAA_15 PF13175.1 415 8.2e-14 44.6 3.5 1 2 3.9e-11 5e-09 28.9 0.1 1 52 13 82 13 111 0.67 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 3_3 - 522 AAA_15 PF13175.1 415 8.2e-14 44.6 3.5 2 2 2e-07 2.5e-05 16.7 0.1 364 411 239 280 156 284 0.82 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 1_29 - 876 Pox_A32 PF04665.7 241 0.00084 11.9 0.0 1 1 1.8e-05 0.0023 10.4 0.0 6 38 472 504 469 519 0.85 # 27166 # 29793 # -1 # ID=1_29;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.539 3_3 - 522 AAA_14 PF13173.1 128 0.00077 12.6 0.0 1 1 1.8e-05 0.0023 11.1 0.0 2 40 35 78 34 107 0.73 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 2_14 - 335 Transposase_20 PF02371.11 87 1.4e-24 79.3 0.2 1 1 2.3e-26 3e-24 78.3 0.2 2 78 210 286 209 296 0.94 # 11882 # 12886 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.490 1_8 - 733 T4SS-DNA_transf PF02534.9 469 5.8e-10 31.5 0.0 1 1 2e-11 1.3e-09 30.3 0.0 250 361 362 476 198 500 0.76 # 9647 # 11845 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 1_29 - 876 T4SS-DNA_transf PF02534.9 469 4.8e-06 18.6 0.1 1 2 0.00023 0.015 7.1 0.0 105 186 533 608 475 623 0.88 # 27166 # 29793 # -1 # ID=1_29;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.539 1_29 - 876 T4SS-DNA_transf PF02534.9 469 4.8e-06 18.6 0.1 2 2 5.1e-05 0.0032 9.2 0.1 319 378 711 769 665 771 0.92 # 27166 # 29793 # -1 # ID=1_29;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.539 1_47 - 188 MTS PF05175.9 170 1.1e-09 31.1 0.0 1 1 1.2e-11 1.5e-09 30.7 0.0 31 141 50 149 41 166 0.84 # 40180 # 40743 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_47 - 188 Methyltransf_23 PF13489.1 161 7.7e-05 15.7 0.0 1 1 7.8e-07 9.9e-05 15.3 0.0 9 120 38 153 27 174 0.78 # 40180 # 40743 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 3_3 - 522 NTPase_1 PF03266.10 168 0.00047 13.1 0.0 1 2 0.00029 0.037 6.9 0.0 3 24 39 60 37 90 0.87 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 3_3 - 522 NTPase_1 PF03266.10 168 0.00047 13.1 0.0 2 2 0.0028 0.36 3.7 0.0 83 142 222 285 193 300 0.71 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 2_4 - 449 zinc_ribbon_5 PF13719.1 37 0.001 11.9 1.8 1 2 0.00028 0.035 7.0 0.0 2 14 24 36 23 38 0.83 # 1850 # 3196 # 1 # ID=2_4;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.610 2_4 - 449 zinc_ribbon_5 PF13719.1 37 0.001 11.9 1.8 2 2 0.0043 0.55 3.2 0.0 5 14 46 55 45 64 0.81 # 1850 # 3196 # 1 # ID=2_4;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.610 8_3 - 263 Trans_reg_C PF00486.23 77 4e-09 29.6 0.0 1 1 6e-11 7.6e-09 28.7 0.0 10 75 34 97 25 99 0.83 # 590 # 1378 # 1 # ID=8_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.556 3_3 - 522 ATP_bind_1 PF03029.12 238 0.00057 12.7 0.0 1 1 9.2e-06 0.0012 11.7 0.0 1 26 40 65 40 70 0.87 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 12_1 - 235 DDE_Tnp_IS240 PF13610.1 140 2.8e-53 172.9 0.1 1 1 3e-55 3.8e-53 172.5 0.1 4 139 75 212 73 213 0.99 # 64 # 768 # 1 # ID=12_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 3_3 - 522 TIGR00634 TIGR00634 563 2.4e-05 16.3 0.0 1 1 3e-07 3.8e-05 15.7 0.0 2 48 13 61 12 76 0.90 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 2_4 - 449 Zn-ribbon_8 PF09723.5 42 0.037 7.3 9.5 1 2 0.00045 0.057 6.7 5.2 7 35 26 52 26 56 0.89 # 1850 # 3196 # 1 # ID=2_4;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.610 2_4 - 449 Zn-ribbon_8 PF09723.5 42 0.037 7.3 9.5 2 2 0.014 1.8 1.9 0.1 25 38 390 402 381 410 0.71 # 1850 # 3196 # 1 # ID=2_4;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.610 2_7 - 102 MarR_2 PF12802.2 62 0.0001 15.2 0.1 1 1 1.1e-06 0.00014 14.8 0.1 22 47 34 59 22 80 0.86 # 5570 # 5875 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.582 3_3 - 522 DUF2813 PF11398.3 373 6.8e-06 18.5 0.0 1 1 9.5e-08 1.2e-05 17.7 0.0 2 70 12 85 11 124 0.86 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 1_29 - 876 AAA_10 PF12846.2 304 1.8e-49 162.0 0.0 1 1 4.7e-51 3e-49 161.3 0.0 1 294 479 768 479 774 0.89 # 27166 # 29793 # -1 # ID=1_29;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.539 1_8 - 733 AAA_10 PF12846.2 304 1.7e-10 34.0 0.0 1 1 4.9e-11 3.1e-09 29.9 0.0 3 296 187 494 186 500 0.68 # 9647 # 11845 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 2_7 - 102 HTH_20 PF12840.2 61 1.6e-06 21.1 0.1 1 1 4.7e-08 3e-06 20.3 0.1 16 59 25 69 21 71 0.87 # 5570 # 5875 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.582 2_9 - 226 HTH_20 PF12840.2 61 0.00031 13.8 0.1 1 1 3.6e-05 0.0023 11.0 0.0 21 46 30 55 18 63 0.85 # 7420 # 8097 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.625 1_47 - 188 RrnaAD PF00398.15 262 2.7e-08 26.4 0.0 1 1 2.7e-10 3.4e-08 26.0 0.0 9 113 29 128 24 148 0.87 # 40180 # 40743 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_47 - 188 Methyltransf_18 PF12847.2 112 3.8e-10 33.6 0.0 1 1 6.3e-12 8e-10 32.6 0.0 4 109 53 146 50 148 0.89 # 40180 # 40743 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 3_3 - 522 AAA_13 PF13166.1 712 3.6e-05 15.6 0.3 1 1 4.7e-07 5.9e-05 14.9 0.3 11 53 30 72 21 110 0.66 # 785 # 2350 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.448 2_12 - 272 Pterin_bind PF00809.17 210 3.6e-60 196.1 0.0 1 1 3.4e-62 4.3e-60 195.9 0.0 1 209 10 216 10 217 0.98 # 10379 # 11194 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.608 1_7 - 1757 AAA_11 PF13086.1 236 0.00012 15.0 1.9 1 2 3.9e-06 0.00049 12.9 0.0 2 75 969 1039 968 1060 0.81 # 4377 # 9647 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 1_7 - 1757 AAA_11 PF13086.1 236 0.00012 15.0 1.9 2 2 0.096 12 -1.5 1.5 62 123 1684 1744 1642 1753 0.46 # 4377 # 9647 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.599 3_5 - 363 MetW PF07021.7 193 0.00058 12.5 0.0 1 2 3.6e-05 0.0046 9.6 0.0 117 152 236 270 233 273 0.83 # 3278 # 4366 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.598 3_5 - 363 MetW PF07021.7 193 0.00058 12.5 0.0 2 2 0.041 5.1 -0.4 0.0 16 35 337 356 329 361 0.78 # 3278 # 4366 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.598 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/681ddc35-6faf-4518-9cc9-9aadfb9156d7 # Target file: checkm_output/bins/pm903/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm903/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/681ddc35-6faf-4518-9cc9-9aadfb9156d7 checkm_output/bins/pm903/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:17:47 2017 # [ok]