# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_5 - 189 HTH_34 PF13601.1 80 2.6e-05 13.0 0.0 1 1 1.2e-05 5.8e-05 11.9 0.0 6 52 32 82 29 90 0.81 # 3473 # 4039 # -1 # ID=1_5;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 1_5 - 189 Rrf2 PF02082.15 83 9.7e-06 14.4 0.0 1 1 9.2e-06 4.6e-05 12.3 0.0 9 58 30 77 24 78 0.82 # 3473 # 4039 # -1 # ID=1_5;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 1_5 - 189 TFIIE_alpha PF02002.12 105 1.2e-08 23.2 0.0 1 2 0.00018 0.0009 7.5 0.0 5 62 18 79 15 114 0.75 # 3473 # 4039 # -1 # ID=1_5;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 1_5 - 189 TFIIE_alpha PF02002.12 105 1.2e-08 23.2 0.0 2 2 2.5e-06 1.3e-05 13.5 0.0 25 71 138 184 133 186 0.93 # 3473 # 4039 # -1 # ID=1_5;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.406 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/361befbd-101f-4c66-9cb7-6f1f7fb42afd # Target file: checkm_output/bins/pm771/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm771/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/361befbd-101f-4c66-9cb7-6f1f7fb42afd checkm_output/bins/pm771/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:14:06 2017 # [ok]