# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_5 - 331 ABC_tran PF00005.22 137 1.1e-09 27.5 9.7 1 1 1.6e-08 8.1e-08 21.4 9.7 11 135 24 280 14 281 0.64 # 4342 # 5334 # 1 # ID=1_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.320 1_5 - 331 SMC_N PF02463.14 220 1.8e-10 29.0 12.8 1 1 2e-09 9.8e-09 23.4 12.8 3 203 6 316 4 328 0.79 # 4342 # 5334 # 1 # ID=1_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.320 1_5 - 331 AAA_21 PF13304.1 303 1e-26 83.1 13.5 1 1 2.8e-27 1.4e-26 82.7 13.5 1 302 26 316 26 317 0.62 # 4342 # 5334 # 1 # ID=1_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.320 1_5 - 331 AAA_29 PF13555.1 62 2.9e-06 15.5 0.0 1 1 1.2e-06 6.1e-06 14.5 0.0 18 55 20 56 10 63 0.72 # 4342 # 5334 # 1 # ID=1_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.320 1_5 - 331 TIGR00611 TIGR00611 365 7.7e-06 13.5 1.9 1 2 2.4e-06 1.2e-05 12.9 0.4 21 47 22 48 3 124 0.79 # 4342 # 5334 # 1 # ID=1_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.320 1_5 - 331 TIGR00611 TIGR00611 365 7.7e-06 13.5 1.9 2 2 0.059 0.29 -1.6 0.0 47 73 261 287 255 314 0.75 # 4342 # 5334 # 1 # ID=1_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.320 1_5 - 331 DUF258 PF03193.11 161 5.6e-06 14.3 0.0 1 1 2.4e-06 1.2e-05 13.2 0.0 31 60 20 49 3 115 0.87 # 4342 # 5334 # 1 # ID=1_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.320 1_5 - 331 NACHT PF05729.7 166 3.3e-06 15.5 0.0 1 1 1.3e-06 6.7e-06 14.5 0.0 3 76 27 105 25 129 0.76 # 4342 # 5334 # 1 # ID=1_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.320 1_5 - 331 AAA_15 PF13175.1 415 2.5e-20 61.5 39.9 1 2 2.1e-06 1.1e-05 13.2 17.0 11 83 9 123 3 132 0.67 # 4342 # 5334 # 1 # ID=1_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.320 1_5 - 331 AAA_15 PF13175.1 415 2.5e-20 61.5 39.9 2 2 1.3e-15 6.6e-15 43.6 32.5 208 415 85 315 58 315 0.59 # 4342 # 5334 # 1 # ID=1_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.320 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/d1d3f353-39b3-4606-8f29-2a081c2f7b1d # Target file: checkm_output/bins/pm755/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm755/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/d1d3f353-39b3-4606-8f29-2a081c2f7b1d checkm_output/bins/pm755/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 10:13:48 2017 # [ok]